Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053783_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:240990190:240995039:1 gene:Zm00001d053783 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper-transporting ATPase RAN1
Sequence

ATGGTATGCCCTCGCATACCTCTGATTAGTTCATTCCTACTTATGCACTTTGGGCCATTT
CGTATAGGAGATCTGCTGAGGTGGATTCTGGTGACCATGGTACAGTTTATTGTTGGCAAA
CGATTCTATGTTGCAGCGTATAGGGCCCTAAGACATGGCTCTACAAATATGGATGTCTTA
GTTGTTATTGGCACTACTGCTTCATATGTCTACTCTGTTTGTGCACTACTTTATGGGGCA
TTCACTGGATTTCATCCTCCAATATATTTTGAGACGAGCGCAATGATAATTACATTTGTG
CTATTTGGGAAGTATCTTGAGGTGCTCGCGAAAGGAAAGACATCAGATGCTATCAAGAAG
CTTGTAGAGCTTGCTCCTGCTACAGCTATTCTACTTCTGAAGGACAAAGAGGGAAAATAT
TCAGGAGAGAAGGAGATTGATGCGTCGTTAGTACAACCTGGTGATGTGTTAAAAGTGCTT
CCTGGTTCAAAGGTTCCTGCTGATGGTATCGTCATTTGGGGTACAAGTCATGTCAATGAG
AGTATGGTAACTGGTGAATCTGTACCAATCTCCAAGGAAGTATCCAGTCTAGTCATTGGA
GGCACAATGAACTTGCATGGTGTTCTTCATATACAAGCGACGAAAGTAGGATCTGGAACA
GTTTTGAGCCAGATAATTTCTCTCGTGGAAACCGCCCAGATGTCTAAGGCCCCTATTCAG
AAGTTTGCTGATTATGTAGCCAGCATTTTTGTTCCTATTGTCATCACCCTGTCCTTCTTG
ACATTCCTTGCATGGTTTCTATGTGGATGGTTGGGAGCATATCCAAACTCATGGTCTGCT
GAAAGTAGCAATTGCTTTGTTTTCTCCCTAATGTTCTCCATATCTGTTGTTGTGATTGCT
TGTCCATGTGCTCTTGGTCTGGCAACACCAACTGCTGTTATGGTAGCAACTGGAGTCGGG
GCTAGTCATGGAGTACTTGTAAAGGGCGGAGATGCCCTGGAGAGAGCTCAGAATGTGAAG
TATGTTATTTTTGACAAGACCGGAACACTGACCCAAGGAAAGGCTACTGTAACTGCAACA
AAGATTTTTTCAGGAATGGATCTGGGTGACTTTCTCACGTTGGTAGCGTCTGCAGAGGCA
AGCAGTGAGCATCCACTGGCAAAAGCTATCTTGGATTATGCATTCCATTTCCATTTCTTC
GGCAATCTTCCCTCAGGAAAAGACAGCATCAAGAGAAGAAAAGAAGAGATACTTTCTCAG
TGGCTTCTGGAAGTCGTGGACTTTGCTGCCTTGCCTGGCAAAGGGATTCAATGTTGGATC
AATGGGAAGAAAGTTTTGGTAGGGAATCGTGCTTTGATAACTGAAAATGGGGTAAACATT
CCTGAAGAAGCTGAACGTTTCCTGGTAGACATGGAGCTGAATGCAAAGACTGGTATTCTC
GTAGCGTATGATGGTGACTTCATTGGCTTAGTTGGGATAACCGATCCTTTGAAAAGGGAG
GCTGCTGTGGTCATACAAGGTCTAAAAAAGATGGGTGTTCATCCAGTTATGGTCACTGGG
GATAACTGGAGGACTGCACGAGCAGTTGCAAAGGAGGTTGGCATCGATGATGTCAGAGCC
GAGGTTATGCCGGCTGGAAAAGCCGATGTAATCCACTCCCTGCAAAAGGATGGCAGTGTT
GTCGCGATGGTCGGAGATGGCATCAACGACTCGCCCGCCCTTGCTGCCGCCGATGTCGGC
ATGGCCATCGGCGCAGGCACTGACATCGCTATCGAGGCGGCTGACTATGTGCTCGTCCGG
AACAACCTGGAGGATGTGATCACGGCTATTGACCTCTCACGGAAGACGTTCATCCGGATC
CGGTGGAACTACTTCTTTGCCATGGCCTACAACGTGATCGCCATCCCCGTAGCTGCTGGC
GCGTTGTTTCCCTTCACCGGGGTCCAGATGCCGCCTTGGTTAGCCGGCGCGTGCATGGCG
TTCTCGTCCGTCAGCGTGGTGTCGTCGTCGCTGCTGCTGAGGAGGTATAGGAAACCCAGA
CTCACCACCGTGCTTCAGATAACAGTGGAATAA

Peptide Sequence

PEP ID

Zm00001d053783_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:240990190:240995039:1 gene:Zm00001d053783 transcript:Zm00001d053783_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper-transporting ATPase RAN1
Sequence

MVCPRIPLISSFLLMHFGPFRIGDLLRWILVTMVQFIVGKRFYVAAYRALRHGSTNMDVL
VVIGTTASYVYSVCALLYGAFTGFHPPIYFETSAMIITFVLFGKYLEVLAKGKTSDAIKK
LVELAPATAILLLKDKEGKYSGEKEIDASLVQPGDVLKVLPGSKVPADGIVIWGTSHVNE
SMVTGESVPISKEVSSLVIGGTMNLHGVLHIQATKVGSGTVLSQIISLVETAQMSKAPIQ
KFADYVASIFVPIVITLSFLTFLAWFLCGWLGAYPNSWSAESSNCFVFSLMFSISVVVIA
CPCALGLATPTAVMVATGVGASHGVLVKGGDALERAQNVKYVIFDKTGTLTQGKATVTAT
KIFSGMDLGDFLTLVASAEASSEHPLAKAILDYAFHFHFFGNLPSGKDSIKRRKEEILSQ
WLLEVVDFAALPGKGIQCWINGKKVLVGNRALITENGVNIPEEAERFLVDMELNAKTGIL
VAYDGDFIGLVGITDPLKREAAVVIQGLKKMGVHPVMVTGDNWRTARAVAKEVGIDDVRA
EVMPAGKADVIHSLQKDGSVVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLVR
NNLEDVITAIDLSRKTFIRIRWNYFFAMAYNVIAIPVAAGALFPFTGVQMPPWLAGACMA
FSSVSVVSSSLLLRRYRKPRLTTVLQITVE

Transcript Sequence

Transcript ID

Zm00001d053783_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:240990190:240995039:1 gene:Zm00001d053783 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper-transporting ATPase RAN1
Sequence

GACGTGCTCCGCGTGCACGGGAGCCGTGGAGGCCGCGCTCTCCGCCCGCCGCGGCGTGCG
CCGCGCCGCCGTGTCGCTGCTCCAGAACCGCGCCCACGTCGTTTTCGACCCCGCGCTCGC
CAAGGAAGACGACATTGTAGAAGCAATAGAAGATGCTGGCTTCGAAGCAGAAATTCTTCC
TGACTCTACTGTTTCTCAGCCAAAACCGCATAAGACTTTGTCAGGACAATTTAGGATAGG
GGGGATGACTTGTGCTGCATGTGTGAACTCGGTTGAGGGGATCTTAAAAAAATTGCCAGG
TGTAAAAGGTGCAGTTGTTGCATTAGCGACCTCATTGGGTGAAGTTGAATATGATCCTTC
TGCCATTAGCAAAGATGAAATTGTTCAGGCCATCGAGGATGCTGGTTTTGACGCTGCACT
GTTGCAAAGTAGTGACCAAGACAAGGTCCTATTAAATGTCCAGGGGTTACATTTCGAGGA
AGATGTAGATGTATTGCATGATATCCTGAAGAAAATGGAAGGCTTGCGTCAGTTCGGTGT
AAATTTTGCAAACTCAGAAGTTGACATTGTATTTGACCCTGAAGTAGTTGGTTTGAGACA
GATTGTAGATACTATCGAGACGGAGAGCAACAATAGGCTGAAAGCTCATGTACAGGATCC
ATATATACGAGCTGCATCAAATGATGCACAAGAGGCCTCTAAGACGCTTCATCTTCTTCG
TTTTAGTTTATTCCTAAGTGTAAGTTTAGTCCCCCCTTCTATCCTAAAGACTTAATTATG
TGTCTTCGATGATATGTTTATTTCGATAATCGATATTATAGATACTGCTTGACAGGAAAC
TTTGTGTTACTTGCATACTGACTCTCCACTGGTTTCCTTGCACCAGATTCCTGTATTTTT
CATCCGCATGGTATGCCCTCGCATACCTCTGATTAGTTCATTCCTACTTATGCACTTTGG
GCCATTTCGTATAGGAGATCTGCTGAGGTGGATTCTGGTGACCATGGTACAGTTTATTGT
TGGCAAACGATTCTATGTTGCAGCGTATAGGGCCCTAAGACATGGCTCTACAAATATGGA
TGTCTTAGTTGTTATTGGCACTACTGCTTCATATGTCTACTCTGTTTGTGCACTACTTTA
TGGGGCATTCACTGGATTTCATCCTCCAATATATTTTGAGACGAGCGCAATGATAATTAC
ATTTGTGCTATTTGGGAAGTATCTTGAGGTGCTCGCGAAAGGAAAGACATCAGATGCTAT
CAAGAAGCTTGTAGAGCTTGCTCCTGCTACAGCTATTCTACTTCTGAAGGACAAAGAGGG
AAAATATTCAGGAGAGAAGGAGATTGATGCGTCGTTAGTACAACCTGGTGATGTGTTAAA
AGTGCTTCCTGGTTCAAAGGTTCCTGCTGATGGTATCGTCATTTGGGGTACAAGTCATGT
CAATGAGAGTATGGTAACTGGTGAATCTGTACCAATCTCCAAGGAAGTATCCAGTCTAGT
CATTGGAGGCACAATGAACTTGCATGGTGTTCTTCATATACAAGCGACGAAAGTAGGATC
TGGAACAGTTTTGAGCCAGATAATTTCTCTCGTGGAAACCGCCCAGATGTCTAAGGCCCC
TATTCAGAAGTTTGCTGATTATGTAGCCAGCATTTTTGTTCCTATTGTCATCACCCTGTC
CTTCTTGACATTCCTTGCATGGTTTCTATGTGGATGGTTGGGAGCATATCCAAACTCATG
GTCTGCTGAAAGTAGCAATTGCTTTGTTTTCTCCCTAATGTTCTCCATATCTGTTGTTGT
GATTGCTTGTCCATGTGCTCTTGGTCTGGCAACACCAACTGCTGTTATGGTAGCAACTGG
AGTCGGGGCTAGTCATGGAGTACTTGTAAAGGGCGGAGATGCCCTGGAGAGAGCTCAGAA
TGTGAAGTATGTTATTTTTGACAAGACCGGAACACTGACCCAAGGAAAGGCTACTGTAAC
TGCAACAAAGATTTTTTCAGGAATGGATCTGGGTGACTTTCTCACGTTGGTAGCGTCTGC
AGAGGCAAGCAGTGAGCATCCACTGGCAAAAGCTATCTTGGATTATGCATTCCATTTCCA
TTTCTTCGGCAATCTTCCCTCAGGAAAAGACAGCATCAAGAGAAGAAAAGAAGAGATACT
TTCTCAGTGGCTTCTGGAAGTCGTGGACTTTGCTGCCTTGCCTGGCAAAGGGATTCAATG
TTGGATCAATGGGAAGAAAGTTTTGGTAGGGAATCGTGCTTTGATAACTGAAAATGGGGT
AAACATTCCTGAAGAAGCTGAACGTTTCCTGGTAGACATGGAGCTGAATGCAAAGACTGG
TATTCTCGTAGCGTATGATGGTGACTTCATTGGCTTAGTTGGGATAACCGATCCTTTGAA
AAGGGAGGCTGCTGTGGTCATACAAGGTCTAAAAAAGATGGGTGTTCATCCAGTTATGGT
CACTGGGGATAACTGGAGGACTGCACGAGCAGTTGCAAAGGAGGTTGGCATCGATGATGT
CAGAGCCGAGGTTATGCCGGCTGGAAAAGCCGATGTAATCCACTCCCTGCAAAAGGATGG
CAGTGTTGTCGCGATGGTCGGAGATGGCATCAACGACTCGCCCGCCCTTGCTGCCGCCGA
TGTCGGCATGGCCATCGGCGCAGGCACTGACATCGCTATCGAGGCGGCTGACTATGTGCT
CGTCCGGAACAACCTGGAGGATGTGATCACGGCTATTGACCTCTCACGGAAGACGTTCAT
CCGGATCCGGTGGAACTACTTCTTTGCCATGGCCTACAACGTGATCGCCATCCCCGTAGC
TGCTGGCGCGTTGTTTCCCTTCACCGGGGTCCAGATGCCGCCTTGGTTAGCCGGCGCGTG
CATGGCGTTCTCGTCCGTCAGCGTGGTGTCGTCGTCGCTGCTGCTGAGGAGGTATAGGAA
ACCCAGACTCACCACCGTGCTTCAGATAACAGTGGAATAAGTTCCTTTTTTTTTTGGCAA
TTTGTTGTATCTCACTTTATCGGAGAGAAATAGATACAAACGTGAATGTTGGTGTGGACG
TGCGGTGCAGTACTGAGAGTCAAACACAGAAACACTTGTACATATCGAACAGTTTGCAAT
TGCAACCGAGT