Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053762_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:240649680:240653939:1 gene:Zm00001d053762 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 /.../e: NCBI BLink).
Sequence	ATGGACTCTCTCCTCGCCAGCTACGCCTCTTCCGACGACGACGCTGATGAGGCCCCACCT GCTCCTCCTCCTGCTCATTCCCCCGCCATCGCCACTTCCTCCGGTGGCGGCGCAGGCGGG TTTTTCTCCTCGCTCCCGCAACCCAAGTCCGCCCCCGCACCGCTCTTCTCCTCCCTCCCG GCGCCCAAATCCACCCCCACGCCGCTCTTCTCCTCTCTCTCGGCGCCCAAATCCTCCCCC GCCCCTAACCCCACCTTCTCCTCTATCCCGCCGCCCAAGTCTTCCGGAGGAAACCCTAAG CGCGTCGTCCAGTATCGCCCGCAGCCGATCCGGCAGCCCACAGGCGACAGCTCCGACGAC GAGGAGGACGATCCCAAGAAGCGCCGCGCGAGCAACAACGAGGCGCGCTTGCCGCCCGTG TCTGCTGGCTCGGGTCCCGTGTCCTCGTTCCTCCCGCCTCCGAAGCACTCGCTCGGGCTC GGCGCCGGCTCTGGCGCGGGAGCGAGGAGGTCGGCAATCGATACGGCTGCGCCAGAGAAG CTAAATCTCGGCACCGCTCTGCCTTCAAGCTCGGTTGCCAACACAGGAGCCCCGGAAAGG CCTGACACCGGCGCAACCGACGACGACGATTCGGAAGATAGTGGCAGTGATGGTGACATG CCTGCGCCGGAGCTGGAGGAGGAGCATGAAAACCAGCAGGCTTTTAATGCTGCAACCGGG GAGCAGCAGCAAAGCTATGATGCTGGAGCTGGGAGCACTAGTGGATATGAAACATATGCG TGGGATCCAAACCACTATGCGCAACACGGTGCTTATGGTTGGGATCCTAGTGCCAGTGCG AATTATGAGGATGGAACACAGTATGCCGCATATGAAAGAGGGCAAAGTGCAGGGTATGTT CATGCGCATGGAGGGGAGCATGCCAGTGGATATGACCATGTTGCGGCAGTGCCATATGGA GTAGATTATACTGCTGGAGGTTATGGTCATGAGGTAGCAGCGACATTGCCACCGGTGCAT GAACCGATATTGCCACCAGAGATGGGTAGGAGTGGAGGGAAGAGAGGTAGAAATGATACG CCGGTCCAGATTTTAGAAGTAAATCAAGCAGAGCTGATGAAGAACAGACCAAAGCAGGAT AAGTCTAAGCTCACGGGGTTGGCCTTCGGTCCTAGTTATCAGCCTGCACCTTCAGCAAAA GGAAAGCCATCCAAGTTGCATAAAAGGAAACATCAGATTGGTTCTCTGTACTTTGACATG AAGTCAAAGGAGATGGAGCTTGCGGAGAGGCGTTCTAAGGGCATTCTTACGAAAGCAGAA ACTCAAGCAAAATATGGCTGGTGA

Peptide Sequence

PEP ID	Zm00001d053762_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:240649680:240653939:1 gene:Zm00001d053762 transcript:Zm00001d053762_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 /.../e: NCBI BLink).
Sequence	MDSLLASYASSDDDADEAPPAPPPAHSPAIATSSGGGAGGFFSSLPQPKSAPAPLFSSLP APKSTPTPLFSSLSAPKSSPAPNPTFSSIPPPKSSGGNPKRVVQYRPQPIRQPTGDSSDD EEDDPKKRRASNNEARLPPVSAGSGPVSSFLPPPKHSLGLGAGSGAGARRSAIDTAAPEK LNLGTALPSSSVANTGAPERPDTGATDDDDSEDSGSDGDMPAPELEEEHENQQAFNAATG EQQQSYDAGAGSTSGYETYAWDPNHYAQHGAYGWDPSASANYEDGTQYAAYERGQSAGYV HAHGGEHASGYDHVAAVPYGVDYTAGGYGHEVAATLPPVHEPILPPEMGRSGGKRGRNDT PVQILEVNQAELMKNRPKQDKSKLTGLAFGPSYQPAPSAKGKPSKLHKRKHQIGSLYFDM KSKEMELAERRSKGILTKAETQAKYGW

Transcript Sequence

Transcript ID	Zm00001d053762_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:240649680:240653939:1 gene:Zm00001d053762 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 /.../e: NCBI BLink).
Sequence	CGGCGGCCCACGCCACGACTCGGCCTCGTACGGTCGGGCCCACGACCCCGACCCGAGCTG CTCTGGCGCCGTGACGCCGTCTTCCTGTTCCCCGTTACTTTTCCTCCCCCGGCGACCGAA GCCGCCGCCCAGCCACGCCATGGACTCTCTCCTCGCCAGCTACGCCTCTTCCGACGACGA CGCTGATGAGGCCCCACCTGCTCCTCCTCCTGCTCATTCCCCCGCCATCGCCACTTCCTC CGGTGGCGGCGCAGGCGGGTTTTTCTCCTCGCTCCCGCAACCCAAGTCCGCCCCCGCACC GCTCTTCTCCTCCCTCCCGGCGCCCAAATCCACCCCCACGCCGCTCTTCTCCTCTCTCTC GGCGCCCAAATCCTCCCCCGCCCCTAACCCCACCTTCTCCTCTATCCCGCCGCCCAAGTC TTCCGGAGGAAACCCTAAGCGCGTCGTCCAGTATCGCCCGCAGCCGATCCGGCAGCCCAC AGGCGACAGCTCCGACGACGAGGAGGACGATCCCAAGAAGCGCCGCGCGAGCAACAACGA GGCGCGCTTGCCGCCCGTGTCTGCTGGCTCGGGTCCCGTGTCCTCGTTCCTCCCGCCTCC GAAGCACTCGCTCGGGCTCGGCGCCGGCTCTGGCGCGGGAGCGAGGAGGTCGGCAATCGA TACGGCTGCGCCAGAGAAGCTAAATCTCGGCACCGCTCTGCCTTCAAGCTCGGTTGCCAA CACAGGAGCCCCGGAAAGGCCTGACACCGGCGCAACCGACGACGACGATTCGGAAGATAG TGGCAGTGATGGTGACATGCCTGCGCCGGAGCTGGAGGAGGAGCATGAAAACCAGCAGGC TTTTAATGCTGCAACCGGGGAGCAGCAGCAAAGCTATGATGCTGGAGCTGGGAGCACTAG TGGATATGAAACATATGCGTGGGATCCAAACCACTATGCGCAACACGGTGCTTATGGTTG GGATCCTAGTGCCAGTGCGAATTATGAGGATGGAACACAGTATGCCGCATATGAAAGAGG GCAAAGTGCAGGGTATGTTCATGCGCATGGAGGGGAGCATGCCAGTGGATATGACCATGT TGCGGCAGTGCCATATGGAGTAGATTATACTGCTGGAGGTTATGGTCATGAGGTAGCAGC GACATTGCCACCGGTGCATGAACCGATATTGCCACCAGAGATGGGTAGGAGTGGAGGGAA GAGAGGTAGAAATGATACGCCGGTCCAGATTTTAGAAGTAAATCAAGCAGAGCTGATGAA GAACAGACCAAAGCAGGATAAGTCTAAGCTCACGGGGTTGGCCTTCGGTCCTAGTTATCA GCCTGCACCTTCAGCAAAAGGAAAGCCATCCAAGTTGCATAAAAGGAAACATCAGATTGG TTCTCTGTACTTTGACATGAAGTCAAAGGAGATGGAGCTTGCGGAGAGGCGTTCTAAGGG CATTCTTACGAAAGCAGAAACTCAAGCAAAATATGGCTGGTGAGGAGGGATGTAAAAGAA CTCAAGATACCTAATTGAGATGCGTGAATTTTTGTTGCACATTTTGTTGTAAGAGTTACG GACTTTGTAAGTTCAATCCTGAACAAATAGAGAACAAATAGTTCAATAACGAGTCAATAT TTTTAAACTTGTGTTACCCATTAAGAATCACGCTCACATTCAATTGATGTGATCTCTGCC AAGTGTATGTGAGTAGA