Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053735_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:240040925:240048316:1 gene:Zm00001d053735 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase superfamily protein
Sequence

ATGTGGAAGGGGAAGAAGAGCGGGCCTCTGGCGCCGCGGGGCCGGAAGCGGGAGTTCCCC
ATTCGTGCGGCGGACTACGAGCTGCTCGAGCCTATCGGCGACGGCGCCACCGCCGTCGTC
CGCCGGGCGCGCTGCCTGCCGCACGGCGGCGAGATCGTCGCCGTCAAGGTCATGAACATG
GCGCACCGCACCGAGTCCGACGTGAACAATGCCTCAGAGGAAGTGAAGACCATGATCATG
ATCGACCACCCAAACCTTCTCAGCGCGTACTGCTCGTTCACGGAAGGCGAAGCCCTGTGG
ATCGTAATGCCCTACATGGCCGGAGGTTCGTGCTACCACCTGATGAAATCGTCGTACCCC
AAGGGATTCGACGACGAGAACTTCATCGCGTTCGTGCTGCGCGAAACGCTGAAAGGTCTG
GAGTACCTTCATGAGAACGGCCACATACATCGGGATGTAAAGGCTGGAAACATACTGCTT
GATCAAGATAAAGGAGTCAAACTATCGGATTTTGGAGTTACCGCCAGCCTTTATGACTCA
ATAATCAATAGACACGGCAAAAGGAAGACACTTGTTGGGACGCCTTGTTGGATGGCCCCT
GAAGTTATGGAGCAAAAGGATTACGATTTCAAGGCGGATATTTGGTCATTTGGCATTACT
GCACTTGAACTTGCTATTGGTCATGCACCATTTTCTAGCCAACCTCCAGCAAAGGTTTTT
CTCATGACGTTGCAACATGCCCCTCCATCACTTCATAACACGAAGGAGAAGAAGTTTTCA
GACTCTTTTAAAAGTATGATTGCCACTTGTCTCATTAAAGACCCAACAAAGAGGCCACCT
GCAAAAAAGCTATTAAAACACCCATTTTTCAGAAGAGCAAGGTCAGACCATAATGCCGTG
AAATGTATGCTAAATAAGTTGCCGTCATTGGCTGAGCGAATGCAATTTATAAAGGAAAAC
GAGGCGAAGTTGCAGGCAGATAAAAAACCTCTTGATAACTGCAAAGAGAAAGCATCACAG
GAAGAGTATAGAAGAGGTGTGAGTGAGTGGAATTTCGATATTGCAGATTTAAAAGCACAA
GCGGCATTGTACCCCGATGAGAACGAAGCAGAAGACTTCTTACGTTTTCTATTTGAACTG
GACATTGTTGATGAAACAACCCAGTTAAAAGATATTAGAGCAGAAAGTCACTCTATAAAT
AATGATGGAACGAATGTTGCTGATGATGGCTTAGGAAAATCAAATTCAACAAGTCCGATG
TCTTCATCCCAAAGTGTGAAACAGCTTGATAAAGGAAGTCCTAATGGCCTTGTGCGCATT
TCTACGTGCAACGATGTTGATGAATATTTAGAGAAAACAGCTTTTCAGAAGGGTCGTTTT
AAGGTGATACATGATTATAGCAAGCTTGAAGGAGCAACGCCAAGAGAGAAGGAATTATTA
GATCGTATAAGTAGTTTAGAGCAAATGCTTCTTGCTACCCAAGACGAAGTTGAGAGGCTT
AAAGCAAAGGGTAAATATGCTATAATGCTGAGTCATAAGGAGCAGAAGGATGACTGCAAC
AACAATAGTAGTGAAGTGGAAGTTAAATTCAACTGTTACCTAGAGCTTGTAATGATAGAA
AGCAGTTGTAGTACGTTTTAA

Peptide Sequence

PEP ID

Zm00001d053735_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:240040925:240048316:1 gene:Zm00001d053735 transcript:Zm00001d053735_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase superfamily protein
Sequence

MWKGKKSGPLAPRGRKREFPIRAADYELLEPIGDGATAVVRRARCLPHGGEIVAVKVMNM
AHRTESDVNNASEEVKTMIMIDHPNLLSAYCSFTEGEALWIVMPYMAGGSCYHLMKSSYP
KGFDDENFIAFVLRETLKGLEYLHENGHIHRDVKAGNILLDQDKGVKLSDFGVTASLYDS
IINRHGKRKTLVGTPCWMAPEVMEQKDYDFKADIWSFGITALELAIGHAPFSSQPPAKVF
LMTLQHAPPSLHNTKEKKFSDSFKSMIATCLIKDPTKRPPAKKLLKHPFFRRARSDHNAV
KCMLNKLPSLAERMQFIKENEAKLQADKKPLDNCKEKASQEEYRRGVSEWNFDIADLKAQ
AALYPDENEAEDFLRFLFELDIVDETTQLKDIRAESHSINNDGTNVADDGLGKSNSTSPM
SSSQSVKQLDKGSPNGLVRISTCNDVDEYLEKTAFQKGRFKVIHDYSKLEGATPREKELL
DRISSLEQMLLATQDEVERLKAKGKYAIMLSHKEQKDDCNNNSSEVEVKFNCYLELVMIE
SSCSTF

Transcript Sequence

Transcript ID

Zm00001d053735_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:240040925:240048316:1 gene:Zm00001d053735 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase superfamily protein
Sequence

ACCGCTTCCTCGTCCTCCTCCTCCTCGTTTCGCTCACGAGAAAGCACGCAAACGCGGTCC
TCGCTCGAGATCCCCCACCGCCCGCCCCCTAAAGCCTCGCGGCGCCGACCCCGACCCCCC
GTGGATCCACCCTGCGCGCGGCCTCTAGAGCTAGTCCAGATCCGCGGGGCGCGCGCCCTC
ACCATCATCACATCGCGCGCCCAGCTAGCCGCGCCTTGGAGGCAAGGCATCGTGCGTGCC
ACCGTACGTCCACCGATCGGTCTCGATCTCGGGCCCTCCCGCTGACGCCTTCGGCTGGCC
TAATAGGGGCGCCGCCGGGGGATCGGAGGGGGGCGCCGCCGTCATGTGGAAGGGGAAGAA
GAGCGGGCCTCTGGCGCCGCGGGGCCGGAAGCGGGAGTTCCCCATTCGTGCGGCGGACTA
CGAGCTGCTCGAGCCTATCGGCGACGGCGCCACCGCCGTCGTCCGCCGGGCGCGCTGCCT
GCCGCACGGCGGCGAGATCGTCGCCGTCAAGGTCATGAACATGGCGCACCGCACCGAGTC
CGACGTGAACAATGCCTCAGAGGAAGTGAAGACCATGATCATGATCGACCACCCAAACCT
TCTCAGCGCGTACTGCTCGTTCACGGAAGGCGAAGCCCTGTGGATCGTAATGCCCTACAT
GGCCGGAGGTTCGTGCTACCACCTGATGAAATCGTCGTACCCCAAGGGATTCGACGACGA
GAACTTCATCGCGTTCGTGCTGCGCGAAACGCTGAAAGGTCTGGAGTACCTTCATGAGAA
CGGCCACATACATCGGGATGTAAAGGCTGGAAACATACTGCTTGATCAAGATAAAGGAGT
CAAACTATCGGATTTTGGAGTTACCGCCAGCCTTTATGACTCAATAATCAATAGACACGG
CAAAAGGAAGACACTTGTTGGGACGCCTTGTTGGATGGCCCCTGAAGTTATGGAGCAAAA
GGATTACGATTTCAAGGCGGATATTTGGTCATTTGGCATTACTGCACTTGAACTTGCTAT
TGGTCATGCACCATTTTCTAGCCAACCTCCAGCAAAGGTTTTTCTCATGACGTTGCAACA
TGCCCCTCCATCACTTCATAACACGAAGGAGAAGAAGTTTTCAGACTCTTTTAAAAGTAT
GATTGCCACTTGTCTCATTAAAGACCCAACAAAGAGGCCACCTGCAAAAAAGCTATTAAA
ACACCCATTTTTCAGAAGAGCAAGGTCAGACCATAATGCCGTGAAATGTATGCTAAATAA
GTTGCCGTCATTGGCTGAGCGAATGCAATTTATAAAGGAAAACGAGGCGAAGTTGCAGGC
AGATAAAAAACCTCTTGATAACTGCAAAGAGAAAGCATCACAGGAAGAGTATAGAAGAGG
TGTGAGTGAGTGGAATTTCGATATTGCAGATTTAAAAGCACAAGCGGCATTGTACCCCGA
TGAGAACGAAGCAGAAGACTTCTTACGTTTTCTATTTGAACTGGACATTGTTGATGAAAC
AACCCAGTTAAAAGATATTAGAGCAGAAAGTCACTCTATAAATAATGATGGAACGAATGT
TGCTGATGATGGCTTAGGAAAATCAAATTCAACAAGTCCGATGTCTTCATCCCAAAGTGT
GAAACAGCTTGATAAAGGAAGTCCTAATGGCCTTGTGCGCATTTCTACGTGCAACGATGT
TGATGAATATTTAGAGAAAACAGCTTTTCAGAAGGGTCGTTTTAAGGTGATACATGATTA
TAGCAAGCTTGAAGGAGCAACGCCAAGAGAGAAGGAATTATTAGATCGTATAAGTAGTTT
AGAGCAAATGCTTCTTGCTACCCAAGACGAAGTTGAGAGGCTTAAAGCAAAGGGTAAATA
TGCTATAATGCTGAGTCATAAGGAGCAGAAGGATGACTGCAACAACAATAGTAGTGAAGT
GGAAGTTAAATTCAACTGTTACCTAGAGCTTGTAATGATAGAAAGCAGTTGTAGTACGTT
TTAACCATAAAAGAGTACACTAAGTTGATCCGATGGATTATCTATTAGAAATCATTTGCG
CATTATGTATTATTTTCAAATATTTCTTAGATATTTCCTTTCTTATTAGATGGATTTAAA
AATGAGATTTGTTATATATGATGGTCTAGTGTTATGATG