Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053732_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:240026737:240030496:-1 gene:Zm00001d053732 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar import/degradation Vid27-related protein
Sequence	ATGGGGGGTTCGCACAGCCGCGAGGACCTCGACCTATCCGACTCTGACTCCGAGGACGCC GAGTCCCCCCGGGCTTCCGACAACTCCTCCGACTACGGCACGCCTCCCCCGGCCTCCGTC TCCTCCAAGTTAGCCAGCGGCGCAGGGGCGGCTACCCCCGCCTCCATCGACGCCATCGAC CGCCACCTCCGCCAGCTCCACCTCAAGTACAACGAGCCCATCTCCCCGAACCCTAGCTCC GGGCCCACCCCCAGCGCTAACCCCGCCGCGCTCAACGCCGTCAAGCTCTACCTCCACATC GGCGGCTCCTCTCCCTCCGCCAAGTGGATCGTCTCCGACCGCCTCGCCGCCGCCTCCTTC GTGCGCGCCGGCGCCGGCGCCGGCGACGGCGACGACGAGGATGACGACGCCCCCGCCGCC GGCGGGCCGTGGTGCCTCGTCGTGGGCTCGAAGATCCGGGCCAGGGTCGGGCCCGAGCTG CAGCTCAAGGCCTTCCCCGCGCAGCGCCGGGTGGATTTCGTCGCCGACGGCGTATGGGCC CTCAAGTTCCTGCACTCCGACGGCTTCGGCGACTTCTGCGCGAAGCACCACAGCTGTATG TTTGAGAACAGCTACGGCGTCGCCGCCACGGACGAGGGCCGCGCCAAGGTATTCGGGAAG GACTTCGCGGCGTGGGCGCGCCCGGAGGACGGCGACGAGTCGATATGGGAGGACGCCACC GACGGCTTCTCCCCGGGCCCCAAGGGCAGCCCGATGCCCCCGCGGACACCGCTACTGAAG GCCGTGCTGGAGGATCTGCGGGAGTTTGAGGAGCCCGTCGAGGAAGGAAGTGGAATCAAG AGCCTTGCGCTTGGCGCGCTGGACAACAGTTTCCTTGTTGGAGACAAGGGCATTGAGGTC GTGAGGAATTTCGAGCATGGGATACATGGAAAGGGCATGTCCGTGAAGTTTTCTGGAGGG AGCACAAACTTCTCGACACCGAAAAAGGCTCTTCTTATGCGGGCCGAGACCAACATGCTT CTGATGAGCCCAGCCACTGATGGAAAGCCACACGCCAAGGGGGTGCATCAGTTGGACATT GAGACGGGGAAGGTGGTTTCAGAATGGAAGTTTGAGAAGGATGGAGCAGATATTAACATG AGGGATATCACCAATGATAGCAAAGGTGCTCAGCTGGATTCGTCTGAGTCCACCTTCTTG GGACTGGATGACAACCAGTTGTGCCGGTGGGATATGAGAGATCGCAGGGGCATTGTACAG AAGTTGGCAAGTGCGACTGAATCGCCAGTGTTGCAGTGGACTCAGGGGCATCAGTTCTCC CGGGGGACAAACTTTCAGTGCTTTGCTTCAACTGGTGATGGTTCAATTGTTGTTGGATCA TTAGATGGGAAAATTCGCTTGTATTCTAAGAGCTCTATGAGGATGGCAAAGACAGCCTTT CCTGGGTTGGGTTCGCCCATTACCCATGTCGACGTGACATATGATGGGAAGTGGATTCTT GGGACAACAGATGCGTACCTGATTCTTGTATGCACCATCTTCATCGACAAAGATGGAAAG GAGAAGACTGGGTTTAGTGGTAGAATGGGGAACCGTATTGCTGCTCCAAGGCTGCTGAAG CTCAACCCACTGGACTCTCATCTAGCAGGAGCAAACAACAGGTTCAGGGAGGGAAGATTC TCTTGGGTGACGGAGAACGGGAAGCAGGAGCGGCATCTAGTGGCGACGGTGGGGAAGTAC AGCGTGGTGTGGAACTTCCTGCAGGTGAAGAACAGCCACCACGAGTGCTACCAGTACCAG GAGGGGCTGAAGAGCTGCTATTGCTACAAGGTGATCCCCAAGGACGAGTCCATCGTGGCC AGCCGCTTCATGCACGACAAGTACTCGGTCAGCGACTCCCCGGAGGCTCCACTGGTGGTG GCCACGCCCATGAAGGTCACCTCCTTCAGCATATCCAGCAGGCACTAA

Peptide Sequence

PEP ID	Zm00001d053732_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:240026737:240030496:-1 gene:Zm00001d053732 transcript:Zm00001d053732_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar import/degradation Vid27-related protein
Sequence	MGGSHSREDLDLSDSDSEDAESPRASDNSSDYGTPPPASVSSKLASGAGAATPASIDAID RHLRQLHLKYNEPISPNPSSGPTPSANPAALNAVKLYLHIGGSSPSAKWIVSDRLAAASF VRAGAGAGDGDDEDDDAPAAGGPWCLVVGSKIRARVGPELQLKAFPAQRRVDFVADGVWA LKFLHSDGFGDFCAKHHSCMFENSYGVAATDEGRAKVFGKDFAAWARPEDGDESIWEDAT DGFSPGPKGSPMPPRTPLLKAVLEDLREFEEPVEEGSGIKSLALGALDNSFLVGDKGIEV VRNFEHGIHGKGMSVKFSGGSTNFSTPKKALLMRAETNMLLMSPATDGKPHAKGVHQLDI ETGKVVSEWKFEKDGADINMRDITNDSKGAQLDSSESTFLGLDDNQLCRWDMRDRRGIVQ KLASATESPVLQWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKSSMRMAKTAF PGLGSPITHVDVTYDGKWILGTTDAYLILVCTIFIDKDGKEKTGFSGRMGNRIAAPRLLK LNPLDSHLAGANNRFREGRFSWVTENGKQERHLVATVGKYSVVWNFLQVKNSHHECYQYQ EGLKSCYCYKVIPKDESIVASRFMHDKYSVSDSPEAPLVVATPMKVTSFSISSRH

Transcript Sequence

Transcript ID	Zm00001d053732_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:240026737:240030496:-1 gene:Zm00001d053732 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar import/degradation Vid27-related protein
Sequence	AAGTTGCAAACTTGCAGTCGCAGCAGCGCAAAACGGCCAAGGGGGCCCCCATCTCTTCCA TCACCGCCCCCAAATTTCAATTTCCCGCACGCTCCTCCTCCGCTCCTCCATCCTCACCTT CTCGCCGAAACCAACCGCCGCAGCCGCCGCCGCCATGGGGGGTTCGCACAGCCGCGAGGA CCTCGACCTATCCGACTCTGACTCCGAGGACGCCGAGTCCCCCCGGGCTTCCGACAACTC CTCCGACTACGGCACGCCTCCCCCGGCCTCCGTCTCCTCCAAGTTAGCCAGCGGCGCAGG GGCGGCTACCCCCGCCTCCATCGACGCCATCGACCGCCACCTCCGCCAGCTCCACCTCAA GTACAACGAGCCCATCTCCCCGAACCCTAGCTCCGGGCCCACCCCCAGCGCTAACCCCGC CGCGCTCAACGCCGTCAAGCTCTACCTCCACATCGGCGGCTCCTCTCCCTCCGCCAAGTG GATCGTCTCCGACCGCCTCGCCGCCGCCTCCTTCGTGCGCGCCGGCGCCGGCGCCGGCGA CGGCGACGACGAGGATGACGACGCCCCCGCCGCCGGCGGGCCGTGGTGCCTCGTCGTGGG CTCGAAGATCCGGGCCAGGGTCGGGCCCGAGCTGCAGCTCAAGGCCTTCCCCGCGCAGCG CCGGGTGGATTTCGTCGCCGACGGCGTATGGGCCCTCAAGTTCCTGCACTCCGACGGCTT CGGCGACTTCTGCGCGAAGCACCACAGCTGTATGTTTGAGAACAGCTACGGCGTCGCCGC CACGGACGAGGGCCGCGCCAAGGTATTCGGGAAGGACTTCGCGGCGTGGGCGCGCCCGGA GGACGGCGACGAGTCGATATGGGAGGACGCCACCGACGGCTTCTCCCCGGGCCCCAAGGG CAGCCCGATGCCCCCGCGGACACCGCTACTGAAGGCCGTGCTGGAGGATCTGCGGGAGTT TGAGGAGCCCGTCGAGGAAGGAAGTGGAATCAAGAGCCTTGCGCTTGGCGCGCTGGACAA CAGTTTCCTTGTTGGAGACAAGGGCATTGAGGTCGTGAGGAATTTCGAGCATGGGATACA TGGAAAGGGCATGTCCGTGAAGTTTTCTGGAGGGAGCACAAACTTCTCGACACCGAAAAA GGCTCTTCTTATGCGGGCCGAGACCAACATGCTTCTGATGAGCCCAGCCACTGATGGAAA GCCACACGCCAAGGGGGTGCATCAGTTGGACATTGAGACGGGGAAGGTGGTTTCAGAATG GAAGTTTGAGAAGGATGGAGCAGATATTAACATGAGGGATATCACCAATGATAGCAAAGG TGCTCAGCTGGATTCGTCTGAGTCCACCTTCTTGGGACTGGATGACAACCAGTTGTGCCG GTGGGATATGAGAGATCGCAGGGGCATTGTACAGAAGTTGGCAAGTGCGACTGAATCGCC AGTGTTGCAGTGGACTCAGGGGCATCAGTTCTCCCGGGGGACAAACTTTCAGTGCTTTGC TTCAACTGGTGATGGTTCAATTGTTGTTGGATCATTAGATGGGAAAATTCGCTTGTATTC TAAGAGCTCTATGAGGATGGCAAAGACAGCCTTTCCTGGGTTGGGTTCGCCCATTACCCA TGTCGACGTGACATATGATGGGAAGTGGATTCTTGGGACAACAGATGCGTACCTGATTCT TGTATGCACCATCTTCATCGACAAAGATGGAAAGGAGAAGACTGGGTTTAGTGGTAGAAT GGGGAACCGTATTGCTGCTCCAAGGCTGCTGAAGCTCAACCCACTGGACTCTCATCTAGC AGGAGCAAACAACAGGTTCAGGGAGGGAAGATTCTCTTGGGTGACGGAGAACGGGAAGCA GGAGCGGCATCTAGTGGCGACGGTGGGGAAGTACAGCGTGGTGTGGAACTTCCTGCAGGT GAAGAACAGCCACCACGAGTGCTACCAGTACCAGGAGGGGCTGAAGAGCTGCTATTGCTA CAAGGTGATCCCCAAGGACGAGTCCATCGTGGCCAGCCGCTTCATGCACGACAAGTACTC GGTCAGCGACTCCCCGGAGGCTCCACTGGTGGTGGCCACGCCCATGAAGGTCACCTCCTT CAGCATATCCAGCAGGCACTAACTAGCCTCCTTGCTCCGCCCCGCAACTTCGCTGCCGGC CGACGCGTTCCCCTTGGCTCCTCGGCCTCCGGTGATCTGGTAACATTTTGTTAAGCAATT GTTTGTGCGACGGTTGCCTGTTCCATTGCCTTCTAAGTTGGTTCAAATTAATTAGTGATT TGCTGTGTTGAGTCGATACGCAACGTTGAAGAGGGGATGGTAGTGTCTGTTGGGTTAGCT ACATATTGCTGAACAATCTGATTTAGCTGTGAGGAAGTGGCTAATGGTTGTAAGAAAGCT GAAAGTTGTTTGATTAAAATAATTGTTAACTATGGATTATGTCAGACTACGATGGTGGTC