Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053727_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:4:239927374:239929510:1 gene:Zm00001d053727 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyrophosphate-energized vacuolar membrane proton pump 1
Sequence

ATGATGGTAGCATTCCTTTGTTTGCTTCCAATGTATGACGTATTTGTTGTTTTGTGTTCC
AGCCCTGTACAAGTTGTTGCTGATTCCTGCAGAACTGGAGCTGCCACTAATGTCATTTTT
GGGCTTGCTCTGGGTTACAAATCAGTCATTATCCCAATTTTTGCTATTGCGTTTAGTATC
TTCCTTAGCTTCAGCCTTGCTGCCATGTATGGTGTTGCTGTGGCTGCTCTTGGAATGCTG
AGTACCATTGCCACAGGCCTTGCTATTGATGCCTATGGCCCTATCAGTGATAATGCTGGA
GGCATAGCTGAAATGGCTGGGATGAGCCATAGGATTCGTGAGAGAACTGATGCTCTAGAT
GCTGCAGGAAACACCACTGCTGCAATTGGAAAGGGTTTTGCTATTGGCTCTGCAGCCTTG
GTATCCCTTGCACTCTTCGGTGCCTTTGTAAGCCGGGCTGCTATCTCCACTGTTGATGTT
CTGACTCCTAAAGTGTTCATTGGGCTTATTGTTGGTGCTATGCTCCCATACTGGTTCTCG
GCAATGACCATGAAAAGTGTAGGCAGTGCTGCACTCAAGATGGTGGAGGAAGTCCGCCGG
CAGTTCAACACCATCCCTGGGCTCATGGAGGGCACCACAAAGCCTGACTACGCAACTTGT
GTCAAGATCTCAACGGATGCATCCATCAAGGAGATGATCCCCCCAGGTGCTCTTGTTATG
CTGACACCACTGATCGTTGGGATTTTGTTTGGGGTTGAGACCCTCGCTGGGGTCCTTGCT
GGTGCCCTTGTCTCTGGTGTTCAGATTGCCATTTCTGCATCCAACACTGGTGGTGCCTGG
GACAACGCCAAGAAGTACATTGAGGCTGGAGCTTCAGAGCATGCCAGGACCCTTGGCCCA
AAAGGTTCTGACCCTCACAAGGCGGCTGTCATTGGTGACACCATTGGAGATCCTCTCAAG
GACACGTCTGGCCCCTCCCTCAACATTCTCATCAAGCTTATGGCGGTTGAATCCCTTGTC
TTCGCCCCCTTCTTCGCCGCCCATGGTGGCATTATCTTCAAATGGCTCTAA

Peptide Sequence

PEP ID

Zm00001d053727_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:4:239927374:239929510:1 gene:Zm00001d053727 transcript:Zm00001d053727_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyrophosphate-energized vacuolar membrane proton pump 1
Sequence

MMVAFLCLLPMYDVFVVLCSSPVQVVADSCRTGAATNVIFGLALGYKSVIIPIFAIAFSI
FLSFSLAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALD
AAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFS
AMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVM
LTPLIVGILFGVETLAGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGP
KGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGIIFKWL

Transcript Sequence

Transcript ID

Zm00001d053727_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:239927374:239929510:1 gene:Zm00001d053727 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyrophosphate-energized vacuolar membrane proton pump 1
Sequence

ATGATGGTAGCATTCCTTTGTTTGCTTCCAATGTATGACGTATTTGTTGTTTTGTGTTCC
AGCCCTGTACAAGTTGTTGCTGATTCCTGCAGAACTGGAGCTGCCACTAATGTCATTTTT
GGGCTTGCTCTGGGTTACAAATCAGTCATTATCCCAATTTTTGCTATTGCGTTTAGTATC
TTCCTTAGCTTCAGCCTTGCTGCCATGTATGGTGTTGCTGTGGCTGCTCTTGGAATGCTG
AGTACCATTGCCACAGGCCTTGCTATTGATGCCTATGGCCCTATCAGTGATAATGCTGGA
GGCATAGCTGAAATGGCTGGGATGAGCCATAGGATTCGTGAGAGAACTGATGCTCTAGAT
GCTGCAGGAAACACCACTGCTGCAATTGGAAAGGGTTTTGCTATTGGCTCTGCAGCCTTG
GTATCCCTTGCACTCTTCGGTGCCTTTGTAAGCCGGGCTGCTATCTCCACTGTTGATGTT
CTGACTCCTAAAGTGTTCATTGGGCTTATTGTTGGTGCTATGCTCCCATACTGGTTCTCG
GCAATGACCATGAAAAGTGTAGGCAGTGCTGCACTCAAGATGGTGGAGGAAGTCCGCCGG
CAGTTCAACACCATCCCTGGGCTCATGGAGGGCACCACAAAGCCTGACTACGCAACTTGT
GTCAAGATCTCAACGGATGCATCCATCAAGGAGATGATCCCCCCAGGTGCTCTTGTTATG
CTGACACCACTGATCGTTGGGATTTTGTTTGGGGTTGAGACCCTCGCTGGGGTCCTTGCT
GGTGCCCTTGTCTCTGGTGTTCAGATTGCCATTTCTGCATCCAACACTGGTGGTGCCTGG
GACAACGCCAAGAAGTACATTGAGGCTGGAGCTTCAGAGCATGCCAGGACCCTTGGCCCA
AAAGGTTCTGACCCTCACAAGGCGGCTGTCATTGGTGACACCATTGGAGATCCTCTCAAG
GACACGTCTGGCCCCTCCCTCAACATTCTCATCAAGCTTATGGCGGTTGAATCCCTTGTC
TTCGCCCCCTTCTTCGCCGCCCATGGTGGCATTATCTTCAAATGGCTCTAAAGATAGCGA
CAACGTTAGTTAGTCGCAAGAGAAAGGCCGCAGTTCTGCGGCTGCGAGGGGAATAGAGCA
GTATGTCAGCTATACAACATCTATGGCATGTGCTTTGCTCCTCCACTTGATTATAGCCCC
CGTTGTGTGTTTCGGTTTCTGTTTTCCTGGAGTTTTTGGTTCCAGGCTTCCGACCATGTT
TTGATCCCATAAATTCTCCTCCAGCCTTCGAGCAACTGAGTCCATCTTCGTAAGTCATCA
GCCCTAGCCAGACATTGAAGCATCGGAAAACTTTAAGGGCTTGTTCAGATATGGTGATGA
TTATGATGATGATTAATCTCAGTTTTTTTCCTTTGAAAGTAATTAGCATGGTCTTTGCTT
GAGATTTTGTTCTCTTTTCAAAACGATATGCATGCGAAATGGAGGTGATGTTTTTTTTTG
AACGGTTGTTTCAAAGCAATATGAAAACATAAAGGTAGTGATGTTCTTCAAAA