Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053726_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:239913835:239917002:1 gene:Zm00001d053726 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myosin heavy chain-related protein
Sequence

ATGCCCCTCTCCTCCACCACCTCGCCGTCGGCGGGGGCGGCCGCCGCCGCCGCAGTGCGC
ACCGCTTCGCCGCCTCGCCGCATCGCCACCCACGTTTTGTTCAGGCAGAAGCTAGGCATT
CCGGCGGGGTTCCAGGCTCAACATGTGAAATGTTTACCTCATTTGATCAGATCTATTGTA
AGAGGTGCTAGATCAGATATCACTGACGGTGACAATGGAACAACTGAGCCCGCGAGGGAA
CTATTGGAGCGTCTGTTTGCCAAGACAAAGAGTCTAGATCCAAGCGCTTCTCAGGGTAGG
GAACTGAGCATGAGCATTGAGGTCCTGAAGACTGAGTTTGAGGCTGCCTTATCAATCCTA
AGGAAGAAAGAGAAGGATCTTCGTGATGCGGAGAAGAAAGTCTCCGTGGATAGGTCAAGG
TTGAACCAGACGAAGCAGGACCTCGATCAGAGGGAGGAGGACATCATCAAAGCATACTCG
AGGCAACATGAAATGGAGAAAGCACTGATGAAGGCGAGCAGGGATTTGACTCTACAAGTC
CGACAGATCAATAACCTGAAGGTTATGATCGAGGAACAAGACAAAAAACTTGTTAGTTCA
CAAGACGCACTTTCTAAGAAGGTTATTGAAGTGGATAAGCTTAAACAAGAGATGCTGAAG
AAGAATGATGAAGTAGCTTTGCTGCATTCAGAGATCGAGTCCAAGGAACAAGAGCTTCTT
GTAGCTAATCAGGCCATTGCACGTCAAGAAGCAACAATTAGGGAGCTTCGAAGTGAAACT
AAAAGAAAGGAAACTGAGGTTGAGAGATTAAATGAATTGGCGAAAGCTAATGAAGACAAA
CTGAAATTTGCAGAACAGGAACTTGAGAAGCAGAATTCAGGATGGATTGCAGCACAGCAA
GAGTTAAAGGAATTGGCACAAATGGCATTCAAGGATAAAGATGATATCAAGAATACAATC
AATGACTTCAAACGGGTGAGGTATTTGCTGGATGCTGTGCGTTCTGAACTAATAGCTTCA
AAAGAGGCTTTAACCTTCTCACGCAAGCAAGTAGAAGATCAAGCGGCACAGTTGAGTAAC
CAAGTGCAGGAACTCACAGACCAAAAGGCACTGATTATTTCTTATACCCGGAATCTGGAA
GCTGCCCAGCTGGAGATTCAAGGAAAGTCAAATGAGCTCAGTACTGTACAATCTCGTTGT
AGTGAACTTGAATCTCAGTTACTTGAGGAAACGGAGAAGGTTGAGTTCCTAGAGGCTATG
TTAACCAAAGAAAGGGAGATCTTGGAACAGAAAACTAAGGAAGTGGCGTTCCTTCAAGAG
GAGGTAGTTCAGAAGGAGAAGGATTACTTCAATTCACAAAAGCTTGTTGAAACAAAAGAG
ACTGAGCTGTTAGAGGCGAGGCATGAAGTCGAAGATATGAAATTGAAGGTGGATTCCATA
CAATTTGCTGTTCGAGAGAAGGATTTGGAGCTTCTGGAGGCACAAAGAAAACTTGATGAA
GTTAACAGCGAAGTTGTTGAACTTCAGCAGCTGATAAATAGCAAGGAGGATCAACTGGTC
CAAGTTAGAACTGAATTACAGGATAAAGAGCAATGCATACAATTGATGCAGGATGAATTG
GATAAGATGAGATTAGGACGCTCGCAAGCTGAATCTGTGGTTCAAAAGATAGTCGAGCTT
ACTAGCAATCTCATAGGTTCTGTCAAAGGCGAAGAATTCAACATTTATAACTTGCTGGAT
GATGAAATTTTAAGCACGAGCACAGCCCTTGAGTACAGTTTGCATAAGCATAACCAACTG
GAGGCTGACATAGACATGTTAAAAGAATCCCTGCGACAGAAGGACATGGATCTGACTGCT
GCTTATAAAGCGCTTGACGCCAAAGATCGAGAGTTGAAGGCAGTAGTTGGAAGGTTAGAT
GTTAGGGACAAGGAACTAGACAAGTTGGAAGAGCTATCCATAGACCCCTATGGCACCAGG
AAACTGTCTAGAGTTGCTGATGAGGCAACCGAAGACAACATTGCTGGTGAAGCGGAGCTC
CAAAAGCATGAGATGGAATCTGTGGAGATGGAGGCACTAGCTGCTAGCACTATGTTGAAG
AAGCTTGCGGATGTGACTAAGAAATTCTTGAGAAGTGGTAGAACTGATTCTGGTACCAAT
TTAGATTCAAACGTTAGTGAAGGTGCTTCTGAATTGGAACCACAAAGGAAACTTAATGTG
ATTCTCGAGGCTAAAAAGGAGATTGTCGGGCTATTTTCTTTGACAGAAGAGCTCGTCACT
GGTGCTCAAACGAAGGACGATGATGAGGAACCATAG

Peptide Sequence

PEP ID

Zm00001d053726_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:239913835:239917002:1 gene:Zm00001d053726 transcript:Zm00001d053726_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myosin heavy chain-related protein
Sequence

MPLSSTTSPSAGAAAAAAVRTASPPRRIATHVLFRQKLGIPAGFQAQHVKCLPHLIRSIV
RGARSDITDGDNGTTEPARELLERLFAKTKSLDPSASQGRELSMSIEVLKTEFEAALSIL
RKKEKDLRDAEKKVSVDRSRLNQTKQDLDQREEDIIKAYSRQHEMEKALMKASRDLTLQV
RQINNLKVMIEEQDKKLVSSQDALSKKVIEVDKLKQEMLKKNDEVALLHSEIESKEQELL
VANQAIARQEATIRELRSETKRKETEVERLNELAKANEDKLKFAEQELEKQNSGWIAAQQ
ELKELAQMAFKDKDDIKNTINDFKRVRYLLDAVRSELIASKEALTFSRKQVEDQAAQLSN
QVQELTDQKALIISYTRNLEAAQLEIQGKSNELSTVQSRCSELESQLLEETEKVEFLEAM
LTKEREILEQKTKEVAFLQEEVVQKEKDYFNSQKLVETKETELLEARHEVEDMKLKVDSI
QFAVREKDLELLEAQRKLDEVNSEVVELQQLINSKEDQLVQVRTELQDKEQCIQLMQDEL
DKMRLGRSQAESVVQKIVELTSNLIGSVKGEEFNIYNLLDDEILSTSTALEYSLHKHNQL
EADIDMLKESLRQKDMDLTAAYKALDAKDRELKAVVGRLDVRDKELDKLEELSIDPYGTR
KLSRVADEATEDNIAGEAELQKHEMESVEMEALAASTMLKKLADVTKKFLRSGRTDSGTN
LDSNVSEGASELEPQRKLNVILEAKKEIVGLFSLTEELVTGAQTKDDDEEP

Transcript Sequence

Transcript ID

Zm00001d053726_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:239913835:239917002:1 gene:Zm00001d053726 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myosin heavy chain-related protein
Sequence

GCGTGATCGCATCCACGCTTCGCTGCACTCCATACGCGGCCGGGAGCTCCCCCGGTTCCA
CCACCTCCTCACCTCATCCGTCTGAAGCCGCCGCTTTTGCCTCGACCTCGCCCGCAGTCC
GCGATAGCGCGGGTTGCCACCCGTCCGATCGCGCCCGGACGACCGCGACCCCCTCCCCTC
ATGTTCCGCGGCCATGCCCCTCTCCTCCACCACCTCGCCGTCGGCGGGGGCGGCCGCCGC
CGCCGCAGTGCGCACCGCTTCGCCGCCTCGCCGCATCGCCACCCACGTTTTGTTCAGGCA
GAAGCTAGGCATTCCGGCGGGGTTCCAGGCTCAACATGTGAAATGTTTACCTCATTTGAT
CAGATCTATTGTAAGAGGTGCTAGATCAGATATCACTGACGGTGACAATGGAACAACTGA
GCCCGCGAGGGAACTATTGGAGCGTCTGTTTGCCAAGACAAAGAGTCTAGATCCAAGCGC
TTCTCAGGGTAGGGAACTGAGCATGAGCATTGAGGTCCTGAAGACTGAGTTTGAGGCTGC
CTTATCAATCCTAAGGAAGAAAGAGAAGGATCTTCGTGATGCGGAGAAGAAAGTCTCCGT
GGATAGGTCAAGGTTGAACCAGACGAAGCAGGACCTCGATCAGAGGGAGGAGGACATCAT
CAAAGCATACTCGAGGCAACATGAAATGGAGAAAGCACTGATGAAGGCGAGCAGGGATTT
GACTCTACAAGTCCGACAGATCAATAACCTGAAGGTTATGATCGAGGAACAAGACAAAAA
ACTTGTTAGTTCACAAGACGCACTTTCTAAGAAGGTTATTGAAGTGGATAAGCTTAAACA
AGAGATGCTGAAGAAGAATGATGAAGTAGCTTTGCTGCATTCAGAGATCGAGTCCAAGGA
ACAAGAGCTTCTTGTAGCTAATCAGGCCATTGCACGTCAAGAAGCAACAATTAGGGAGCT
TCGAAGTGAAACTAAAAGAAAGGAAACTGAGGTTGAGAGATTAAATGAATTGGCGAAAGC
TAATGAAGACAAACTGAAATTTGCAGAACAGGAACTTGAGAAGCAGAATTCAGGATGGAT
TGCAGCACAGCAAGAGTTAAAGGAATTGGCACAAATGGCATTCAAGGATAAAGATGATAT
CAAGAATACAATCAATGACTTCAAACGGGTGAGGTATTTGCTGGATGCTGTGCGTTCTGA
ACTAATAGCTTCAAAAGAGGCTTTAACCTTCTCACGCAAGCAAGTAGAAGATCAAGCGGC
ACAGTTGAGTAACCAAGTGCAGGAACTCACAGACCAAAAGGCACTGATTATTTCTTATAC
CCGGAATCTGGAAGCTGCCCAGCTGGAGATTCAAGGAAAGTCAAATGAGCTCAGTACTGT
ACAATCTCGTTGTAGTGAACTTGAATCTCAGTTACTTGAGGAAACGGAGAAGGTTGAGTT
CCTAGAGGCTATGTTAACCAAAGAAAGGGAGATCTTGGAACAGAAAACTAAGGAAGTGGC
GTTCCTTCAAGAGGAGGTAGTTCAGAAGGAGAAGGATTACTTCAATTCACAAAAGCTTGT
TGAAACAAAAGAGACTGAGCTGTTAGAGGCGAGGCATGAAGTCGAAGATATGAAATTGAA
GGTGGATTCCATACAATTTGCTGTTCGAGAGAAGGATTTGGAGCTTCTGGAGGCACAAAG
AAAACTTGATGAAGTTAACAGCGAAGTTGTTGAACTTCAGCAGCTGATAAATAGCAAGGA
GGATCAACTGGTCCAAGTTAGAACTGAATTACAGGATAAAGAGCAATGCATACAATTGAT
GCAGGATGAATTGGATAAGATGAGATTAGGACGCTCGCAAGCTGAATCTGTGGTTCAAAA
GATAGTCGAGCTTACTAGCAATCTCATAGGTTCTGTCAAAGGCGAAGAATTCAACATTTA
TAACTTGCTGGATGATGAAATTTTAAGCACGAGCACAGCCCTTGAGTACAGTTTGCATAA
GCATAACCAACTGGAGGCTGACATAGACATGTTAAAAGAATCCCTGCGACAGAAGGACAT
GGATCTGACTGCTGCTTATAAAGCGCTTGACGCCAAAGATCGAGAGTTGAAGGCAGTAGT
TGGAAGGTTAGATGTTAGGGACAAGGAACTAGACAAGTTGGAAGAGCTATCCATAGACCC
CTATGGCACCAGGAAACTGTCTAGAGTTGCTGATGAGGCAACCGAAGACAACATTGCTGG
TGAAGCGGAGCTCCAAAAGCATGAGATGGAATCTGTGGAGATGGAGGCACTAGCTGCTAG
CACTATGTTGAAGAAGCTTGCGGATGTGACTAAGAAATTCTTGAGAAGTGGTAGAACTGA
TTCTGGTACCAATTTAGATTCAAACGTTAGTGAAGGTGCTTCTGAATTGGAACCACAAAG
GAAACTTAATGTGATTCTCGAGGCTAAAAAGGAGATTGTCGGGCTATTTTCTTTGACAGA
AGAGCTCGTCACTGGTGCTCAAACGAAGGACGATGATGAGGAACCATAGCATCATAAGTT
CATAACTGAACATATAACTGCATCATGAATGTTATGCATGTCAACTGGAATGACGCAGCT
GAAATTGTTACCATCGTTTCCTTTCCTTTTGGGGCTCAGGATTTCTTTATGTTCTTTTGG
TTCATGGATGGCATCGCAAAATGAAAAAAAAAGATTGTTTAGATTTTGGTTAAAAGGATG
ATGATTGTGCACTTGTGCTGCTGGATCTCGGGTGTTTACATCATATTTCAGCAAATACAT
TAG