Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053709_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:239664547:239667110:1 gene:Zm00001d053709 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 11
Sequence

ATGATTCCCCAGAGCCAGAGCAGCTCCCTGCAGCGCCTTCAACACGTCGAGAAGCGGATA
GTGCGGGTGCTGGAGCTTGCGGGAGCGGTGATGGAGGAGCTGGGATACTCTCAGGGCCCT
CGCACCGATGCAGTCGGCGCGCACTGCCGCGAGTTCATGATGGCTATGAAGGAAATTCAA
ACGACACTGCGTGAGGAAATCAAAAGTGCTTGCGAATACCGTCCATTTGAAAAGTGTGAT
TACAGCGCAAGGATTGCTAATGAGATATGTTGCAAGAAGCTGGAGTATGTACTCGAGAAG
TTGGATACAATGCAACAAAACCTTGAACAGAGCACTGATAATGTTTAG

Peptide Sequence

PEP ID

Zm00001d053709_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:239664547:239667110:1 gene:Zm00001d053709 transcript:Zm00001d053709_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 11
Sequence

MIPQSQSSSLQRLQHVEKRIVRVLELAGAVMEELGYSQGPRTDAVGAHCREFMMAMKEIQ
TTLREEIKSACEYRPFEKCDYSARIANEICCKKLEYVLEKLDTMQQNLEQSTDNV

Transcript Sequence

Transcript ID

Zm00001d053709_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:239664547:239667110:1 gene:Zm00001d053709 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 11
Sequence

ATTTTTTTCCAAATATTAAAAAAAAACGCCGGCTGCAACTGCAATCGGCGACGGTGAACC
ATAGAGCAGCCGGCAGCGTCGCCGTCGCGCCGCTCCCGCACTGCTCCCCTGCCCCGGCCG
CCGCCGCCGTCGTCGTCCGCCCGCTCACCGCTGATCGATGACCGCCCGCTCTGGCGCTCG
GCCTTCGCCCCGTTTCTGCCCTCGCCCCTCAGCCGCCTCGGCGCCTGTCCGAGACCGACG
TCCTCTCTCCATCCAGTCAGTTGACCAGCTCGACTGCTCTAGCTCGTGCTCTCCGTCGCG
GATTTGATTTCTTCCTTTCAGCCCAACCCAGCCCAAAGCCGCCAGATCGCGGCACTCCGT
CCAACCCTCGGCGCCACCGATCCCCTTCTCCACCCCCTCTCCTCCTCGTCGTCGGTGAAG
ATGATTCCCCAGAGCCAGAGCAGCTCCCTGCAGCGCCTTCAACACGTCGAGAAGCGGATA
GTGCGGGTGCTGGAGCTTGCGGGAGCGGTGATGGAGGAGCTGGGATACTCTCAGGGCCCT
CGCACCGATGCAGTCGGCGCGCACTGCCGCGAGTTCATGATGGCTATGAAGGAAATTCAA
ACGACACTGCGTGAGGAAATCAAAAGTGCTTGCGAATACCGTCCATTTGAAAAGTGTGAT
TACAGCGCAAGGATTGCTAATGAGATATGTTGCAAGAAGCTGGAGTATGTACTCGAGAAG
TTGGATACAATGCAACAAAACCTTGAACAGAGCACTGATAATGTTTAGCGAGCTGGCTAC
ATATTAGTTGGGAATACAACAGATATCTGATCGATCAGTATGCAGAAGGAATGTAGAAGC
ATTCTATCAACTCATGATTGGAGGAACTCTGGGATTGTAACTTGTGATTCCATGTTCTGT
GGCAGAGTTATTAGTTTTGGCTGCCTGCTGATGTCCAGTAGCATAGCAATGGGTCCTTGG
GCTTGAAGTCGTGGGATTTTGAGGCACTATTTTTACCGACGAGAATTTCCTCTTCTGTAT
TTTATCGACTTGCTTCATCCTTAAAACATGCCTTTGGTACATTGTTAACCCATTTCTTCA
CTGGTGATCTTCATATATTATGCAGTGACCGCTGTTCTGATTTTATTGCTGATGCTGGCC
CGACATCCATTGCATTAGAAGCTCATCAGGTTTTATCGGCTGCAAATGTTGTATGACTGT
TTAGTCTAGCAATCTAGTTTAGAGAGCAAGTAAGACATAAATGAGCCATTTATCTGTCAC
TAACCTTGAAGTCTATGACTTGTATAAAATGGCTGGGTATGCCGACAATATCAACCTCTT
CGGACATCTGATTTTCGGTGTATCTTCGGATCTTCCTAGTATCTTTCCTGTTTGC