Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053688_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:4:239045005:239054055:1 gene:Zm00001d053688 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brefeldin A-inhibited guanine nucleotide-exchange protein 1
Sequence	ATGCCACTCGGCGGGGCGTCTCCGTCGGGCCGCGTTCTGGGTCCGGCGCTGGACCGGATC ATAAAAAACGCCGCATGGCGGAAGCACTCAGCGCTCGTGGCCGCGGCAAAGGCGGCACTC GACCTCCTCTCTTCATCGCCGGCATACCCGTCTTCGGACCCTATCTCGCCGCAATCCTCG CTGCTGCTCGGCCTGCCCTCCGCCGCCGCCGACGCGGCCCTCCACGCGCTGCTGCTCGCT CTCGAGTCAGCTTCGCCCAAGGTCGTCGACCCCGCTCTCGATTGCGTCACCAAACTTCTT TACCACCGCCTCCTCTTTGGCGACCTCGGCTGCGCCGGGGACGATGCCTCTTCCCCCACC TCCAGGCTCTTCACCGCCGTCCTTACCTGTGGCGCTCTCTCTGATGATGCAATGGAGCTT GCCACCCTCCGTGTTATCATCGCCGCCGCGCGGTGCCCCACTGTCGCCATCCGCGGGGAG GGCCTCGGCCAGGTGCTCAAGACCTGCTACAACATATACCTCAGCAGCAACAGTGGGGCC AATCAGCTCTGCGCCAAGCTTGCGCTGGCGCAGGTCCTGCTGATTGTGTTTGCACGCGTG GAGGTGGATTCGATGGACGTGCGCATTCGGACGGTGTCGATCACGGAGATGATGGACGTG TCTGATCGCAACCTGAACGACTCCAGCATCGTGCAGGTGGCTCAGGGGTTTATAAACGAG ACAATGGAGGGGAGTGTTGCACCAGAGCCAGGGTCACATTTGGAGCCAACCGAGGTGGAT GGAAAGGAGGATACTGGGATGAGCAAGATTAGAGAGGATGGGCTTGCACTCTTGAAGAAC CTGTGTAAGCTGTCAATGAAGTTCTCGACGCCAGATAACCCTGAGGATCAGATGTTGCTG CGCGGCAAGGTGTTGTCACTTGAGTTGCTGAAAATGGTTATCGACAATGCTGGCCCTTTC TGGAGAACAAATGAAAAGTACATTGGAGCAATCAAGCAGTATCTTTGTTTGTCCTTATTG AAGAACAGTGCTTTGTCAGCAATGAGTATTTTCCAGTTGTTGTGCTCCATATTTGTGGGC TTACTGTCAAGGTTTAGATCTGGACTGAAAGAGGAAATTGGAATATTCTTTCCAATGCTT GTTCTAAGGGTTCTTGAGAATGTCCATCAACCTAGCTTTCTACAAAAAATGACAGTTCTA AACTTGTTGGAGAAGATCTGTAAAGAATCTCAGGTTCTTATTGATATCTTTGTGAACTAT GATTGTGATGTAGATGCACCAAATATTTTTGAAAGGGTTGTCAATGGACTTCTAAAGACT GCTTTAGGTGTTCCTCCAGGATCTACAACAACATTAACTATAGCCCAAGACCAAACATTT CGTATTGAGTCAGTGAAGTGCCTTGCAACCATAATCAAGTCAATGGGTTCATGGATGGAC CAACAGCTGAGAATTGGTGATTTTTCACCAAAAATATCTGAAGCTTCTTTAAGTTCTTTA AGTTCAATAGATAACCCCAACATCCTTATTGGAGAAGATGGTAGTGGAATTGATTATGAA CTGCAATCTGACTCTGGTAGCCCAGATGTATCTGGTGCTCCCTCCCTTGAGCAGCGTCGT GCTTTTAAAATAGAACTTCAGAAAGGAATATCCTTGTTTAACCGAAAACCTTCCAAGGGA ATTAATTTTCTCGTTAAAAGCAAGAAGATAGGGCATACACCAGAAGATGTTGCTTGTTTC TTGAGAAATACTGCTGGTTTAAATGCAACAATGATTGGAGACTATTTGGGTGAAAGAGAT GAATTCCCTATCAAAGTTATGCATGCATATGTTGATGCACTAAACTTTGAAGGTATGGAC TTCGGTGAAGCTATTAGGTATTATTTGCGAGGCTTCAGGTTGCCTGGGGAAGCACAGAAA ATTGATCGGATCATGGAAAAGTTTGCTGAACGATACTGCAAATGCAATCCAAACTCCTTT ACCAGTGCAGATACTGCATATGTTCTTGCTTATTCTGTAATCATGCTCAACACTGATGCT CACAATACTATGGTCAAGGATAAGATGTCTAAATCTGACTTCATTCGCAATAACCGAGGA ATAGATGATGGAAAGGATTTGCCAGAAACTTATCTGGGTACACTATATGACCAAATTGTC AAAAATGAGATCAAAATGAGTGCTGGTTCATCAGTTCCACAAAACAAGCAACCTAGTAGT GTGATGAAGCTACTAGGATTGGACAATATTATTAGCTTTGTTAACTGGAAACAGGCTGAT GACAGGGTAGTTGGAGCAAACGACCTGCTCATCAAAACCATACAAGAGAAATTTAAACTA AAGAGTGGAAAGTCGGAGTAA

Peptide Sequence

PEP ID	Zm00001d053688_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:4:239045005:239054055:1 gene:Zm00001d053688 transcript:Zm00001d053688_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brefeldin A-inhibited guanine nucleotide-exchange protein 1
Sequence	MPLGGASPSGRVLGPALDRIIKNAAWRKHSALVAAAKAALDLLSSSPAYPSSDPISPQSS LLLGLPSAAADAALHALLLALESASPKVVDPALDCVTKLLYHRLLFGDLGCAGDDASSPT SRLFTAVLTCGALSDDAMELATLRVIIAAARCPTVAIRGEGLGQVLKTCYNIYLSSNSGA NQLCAKLALAQVLLIVFARVEVDSMDVRIRTVSITEMMDVSDRNLNDSSIVQVAQGFINE TMEGSVAPEPGSHLEPTEVDGKEDTGMSKIREDGLALLKNLCKLSMKFSTPDNPEDQMLL RGKVLSLELLKMVIDNAGPFWRTNEKYIGAIKQYLCLSLLKNSALSAMSIFQLLCSIFVG LLSRFRSGLKEEIGIFFPMLVLRVLENVHQPSFLQKMTVLNLLEKICKESQVLIDIFVNY DCDVDAPNIFERVVNGLLKTALGVPPGSTTTLTIAQDQTFRIESVKCLATIIKSMGSWMD QQLRIGDFSPKISEASLSSLSSIDNPNILIGEDGSGIDYELQSDSGSPDVSGAPSLEQRR AFKIELQKGISLFNRKPSKGINFLVKSKKIGHTPEDVACFLRNTAGLNATMIGDYLGERD EFPIKVMHAYVDALNFEGMDFGEAIRYYLRGFRLPGEAQKIDRIMEKFAERYCKCNPNSF TSADTAYVLAYSVIMLNTDAHNTMVKDKMSKSDFIRNNRGIDDGKDLPETYLGTLYDQIV KNEIKMSAGSSVPQNKQPSSVMKLLGLDNIISFVNWKQADDRVVGANDLLIKTIQEKFKL KSGKSE

Transcript Sequence

Transcript ID	Zm00001d053688_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:239045005:239054055:1 gene:Zm00001d053688 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brefeldin A-inhibited guanine nucleotide-exchange protein 1
Sequence	GGCTACGTCCACGATGCCACTCGGCGGGGCGTCTCCGTCGGGCCGCGTTCTGGGTCCGGC GCTGGACCGGATCATAAAAAACGCCGCATGGCGGAAGCACTCAGCGCTCGTGGCCGCGGC AAAGGCGGCACTCGACCTCCTCTCTTCATCGCCGGCATACCCGTCTTCGGACCCTATCTC GCCGCAATCCTCGCTGCTGCTCGGCCTGCCCTCCGCCGCCGCCGACGCGGCCCTCCACGC GCTGCTGCTCGCTCTCGAGTCAGCTTCGCCCAAGGTCGTCGACCCCGCTCTCGATTGCGT CACCAAACTTCTTTACCACCGCCTCCTCTTTGGCGACCTCGGCTGCGCCGGGGACGATGC CTCTTCCCCCACCTCCAGGCTCTTCACCGCCGTCCTTACCTGTGGCGCTCTCTCTGATGA TGCAATGGAGCTTGCCACCCTCCGTGTTATCATCGCCGCCGCGCGGTGCCCCACTGTCGC CATCCGCGGGGAGGGCCTCGGCCAGGTGCTCAAGACCTGCTACAACATATACCTCAGCAG CAACAGTGGGGCCAATCAGCTCTGCGCCAAGCTTGCGCTGGCGCAGGTCCTGCTGATTGT GTTTGCACGCGTGGAGGTGGATTCGATGGACGTGCGCATTCGGACGGTGTCGATCACGGA GATGATGGACGTGTCTGATCGCAACCTGAACGACTCCAGCATCGTGCAGGTGGCTCAGGG GTTTATAAACGAGACAATGGAGGGGAGTGTTGCACCAGAGCCAGGGTCACATTTGGAGCC AACCGAGGTGGATGGAAAGGAGGATACTGGGATGAGCAAGATTAGAGAGGATGGGCTTGC ACTCTTGAAGAACCTGTGTAAGCTGTCAATGAAGTTCTCGACGCCAGATAACCCTGAGGA TCAGATGTTGCTGCGCGGCAAGGTGTTGTCACTTGAGTTGCTGAAAATGGTTATCGACAA TGCTGGCCCTTTCTGGAGAACAAATGAAAAGTACATTGGAGCAATCAAGCAGTATCTTTG TTTGTCCTTATTGAAGAACAGTGCTTTGTCAGCAATGAGTATTTTCCAGTTGTTGTGCTC CATATTTGTGGGCTTACTGTCAAGGTTTAGATCTGGACTGAAAGAGGAAATTGGAATATT CTTTCCAATGCTTGTTCTAAGGGTTCTTGAGAATGTCCATCAACCTAGCTTTCTACAAAA AATGACAGTTCTAAACTTGTTGGAGAAGATCTGTAAAGAATCTCAGGTTCTTATTGATAT CTTTGTGAACTATGATTGTGATGTAGATGCACCAAATATTTTTGAAAGGGTTGTCAATGG ACTTCTAAAGACTGCTTTAGGTGTTCCTCCAGGATCTACAACAACATTAACTATAGCCCA AGACCAAACATTTCGTATTGAGTCAGTGAAGTGCCTTGCAACCATAATCAAGTCAATGGG TTCATGGATGGACCAACAGCTGAGAATTGGTGATTTTTCACCAAAAATATCTGAAGCTTC TTTAAGTTCTTTAAGTTCAATAGATAACCCCAACATCCTTATTGGAGAAGATGGTAGTGG AATTGATTATGAACTGCAATCTGACTCTGGTAGCCCAGATGTATCTGGTGCTCCCTCCCT TGAGCAGCGTCGTGCTTTTAAAATAGAACTTCAGAAAGGAATATCCTTGTTTAACCGAAA ACCTTCCAAGGGAATTAATTTTCTCGTTAAAAGCAAGAAGATAGGGCATACACCAGAAGA TGTTGCTTGTTTCTTGAGAAATACTGCTGGTTTAAATGCAACAATGATTGGAGACTATTT GGGTGAAAGAGATGAATTCCCTATCAAAGTTATGCATGCATATGTTGATGCACTAAACTT TGAAGGTATGGACTTCGGTGAAGCTATTAGGTATTATTTGCGAGGCTTCAGGTTGCCTGG GGAAGCACAGAAAATTGATCGGATCATGGAAAAGTTTGCTGAACGATACTGCAAATGCAA TCCAAACTCCTTTACCAGTGCAGATACTGCATATGTTCTTGCTTATTCTGTAATCATGCT CAACACTGATGCTCACAATACTATGGTCAAGGATAAGATGTCTAAATCTGACTTCATTCG CAATAACCGAGGAATAGATGATGGAAAGGATTTGCCAGAAACTTATCTGGGTACACTATA TGACCAAATTGTCAAAAATGAGATCAAAATGAGTGCTGGTTCATCAGTTCCACAAAACAA GCAACCTAGTAGTGTGATGAAGCTACTAGGATTGGACAATATTATTAGCTTTGTTAACTG GAAACAGGCTGATGACAGGGTAGTTGGAGCAAACGACCTGCTCATCAAAACCATACAAGA GAAATTTAAACTAAAGAGTGGAAAGTCGGAGTAAGACCAACACAAACCATTGTTATACCA TAGCTTTGTATCTGCTGATGATTTGGATGTAACTCAAGCTTTTGCTTTATGCAGGTCTGT GTTTTCTGTTATCACTGATACAACAATTTTAAGATTCATGATGGAGGTTTGTTGGGCCCC TATGATGGCTGCATTCAGTGTGACACTTGATCAGAGTGATGATAAGGCGGCCACGTCGCA GTGTTTGCAGGGATTCAGATCTGCTGTGCATGTTACCTCTGTTATGTGCATGGAGACACA GAGAGATGCCTTTGTGACATCTGTAGCCAAATTCACATATCTGCATTGTGCTGCTGACAT GAAACAAAAGAATGTGGATGCTGTGAAGGCTATTATATCCATTGCAATCGAAGATGGTGA TTATTTGCAGGAAGCTTGGGAGCATGTACTAACATGCCTTTCACGGTTTGAGCATTTACA CCTTCTTGGAGAGGGGGCACCTACTGATGCTTCATTTCTCACAGTACCACTGGTTGACTC AGAAGAAAAAACACAGAAGTCTACCTCTATGTCATCAAAGAGAACTAATGCACTTCAGAA TCCAGCTGTAATGGCTGCTGTTAGAGGAGGTTCTTATGACAGCACAACAGCAAAAAATAA AGCATCACCGTTGGTTACTCCTGAACAGATTAATAATTTCATATCAAACATAAACCTGCT AGACCAGATTGGCATTTTTGAGTTAAATCACATATTTGCTCATAGCCCAAGATTAAATAG TGATGCTATTGTTGCTTTTGTGAAAGCTCTTTGCAAAGTTTCAATGACAGAGTTGCAGTC TCCTACAGATCCTCGTATTTTCTGCCTAACAAAGATTGTTGAGATTGCGTAAGCTTATAA TCTATGACCTATGTCAAGCTACATGAAATTATGAATATGTTTGTAGACAATATTTTCCAA AACGACCTAATTCGAAGTTTCATTGCACAGGCATTACAATATGAACCGCATTCGTTTGGT TTGGTCCCGTATTTGGAAAGTTCTGTCAGATTTTTTTGTTTCTGTTGGGTTGTCAGAGAA CCTTTCAGTTGCAATATTTGTTATGGACTCTTTAAGGCAGCTAGCTATGAAGTTTCTGGA AAGAGAAGAACTGGCAAATTATAATTTCCAAAATGAATTCCTGCAACCTTTTGCGGTTGT TATGCAGAAGAGCAATGCTTCAGAAGTTCGTGAACTTATAGTTCGATGTGTCTCCCAAAT GGTTCTGAGTCGTGTCAACAATATAAAATCTGGTTGGAAAAGTGTTTTTACGGTTTTTAC TGCAGCTGCTGCTGATGATCGAAAAAATATTGTTTTGTTGGCATTTGAAACCATGGAAAA GATTGTTCGGGACTATTTCCCTTACATAACTGAAACTGAAACAACAACGTTTACTGATTG TGTTAAATGCCTTATCACATTCACAAGTAGTAAATTCAGCAGTGATGCCAGTCTTAATGC CATTGCATTTCTTCGGTTTTGTGCTGTCAAACTCGCTGAGGAAGGATTTATTAGTCATGA GAAGGATACTGAACAGCAACCAAGTAAAATAGATTCATCAGATGGGAACAGCATGGTGCA TAAGGACGATCATGTTTACTTCTGGGTTCCTTTGCTTGCTGGTCTAGCTAGATTGACAAC GGACTCAAGACCAACTATCAGAAAAGGTTCTGCAGAAGTGCTCTTTGACATCTTGGCAGA TCATGGGCACCTCTTTTCTCAGTCCTTCTGGGCTAATATCTTCGAATCAGTTATCTATCC TCTTTTTAGCAGTGAAAGTTTTGCACCAAATGGCCAGATCTCAAGTGTAAATAGTACTGA GGATGATTCTTGGAATTTTGAAACTAAAACGGTGGCTCTAAAATGTTTAGCAGATTTGTA TATTATGTTTTTTGAAGTGATGCGTCCAGAACTTTCTAGAGTTACTTCTGTTATTACGAA TTTCATCAGAAGCCCTTATAAACAATCAGCTAGCACGGGTATATCAGTTTTTCAGCGTTT AACAGAAGGACTCGCGAGCAAGCTCTCCAATGATGAGTGGGGAACGGTCCTGTTGTGCTT CAAAGAATCAGCATCACATACATTTGTTGTGTTTGACAAAATAGTTAAAATGATGAAAGT CATTGAAATTCCAGATAGAAATGAATCTTACTCTGAAGCTGAGCAATATTCAGATCATGA CATATACAATGATGAAGAAGAGGAAGCCAATATGGAAACGGCGTCTTATGCTATTGTCAG AATGAAGAATCATATGGCTTTGCAACTCTTAATCGTTGAGGGCATCATCAAATTGTATGA GGTTCACAGGAGCTTTCTTGGTGCTGAGCATATAGTCATAATGTTGGAGATTCTATCTGC CATTGCATCACATGCAAGTGAAGTGAACTCTGAATCTAACTTGCACAGGAAACTACATAA AGCATGCTCTATTTTGGAGGTACCTGAGCCAGCGGTTATCCATTTCGAGAGCGAGTCCTA CCAGAGCTACCTCAAACTTCTCCAAGCTCTTCTTCATGATAACCCATCTTTGTCAGAAAC TATGAATGTGGAGTCACAAATTATGCTCGTCTGTGAGAAAATACTGCGAATGTATCTGAC CTGCGCAGAGCATGAACTGTCTAATGGTGTTTCTGGTAGGGGTCCAGCTTTACAACGGAT GCCTCTGGGTACTTCTAAAAAGGAGGAGCTGGGTGCTAGAACTCCATTTGTCCTTCATGT GATGGGGTTATTGGGCAGTTTAGAGAAGAACTGCTTTAGGAGAAACTTGCCCCGCTTTTT CCCCTTATTAGCTAATCTTATTCGCTGCGAGCATAACTCTGGAGAAGTTCAAGTTGCACT GTATGATATCTTCCAATCATCAATAGGCCCCATAATATCAGCATAGCGTATATTGTTTCC TCGCCAGTTGTACAATTTTGTCAGATTGTGGTATAAGAAAAGGGTACAGCTTTACAGTAC TGTAAATGATTCATGGTTGAGGCATTTCTGGTGTTGAAGCTACATGGAACATCGACCCAG ATGTCTAAACAAGGTTTTTGCTGCGCACATTTGCCATTCTTTTTTCTAACATTCACTGGG TAATCATTGACACGTTAAAGAGGATGGACATTGGAATAAGTCCCTAATTCCTGTTTTGGT GTCATTTCCCCCCTTTCATCTTGGCTCTGTATAGTGTCGTCTCCCGAACCTCAGCTACCA GTGAAGAGGGACTTCTGTCATATGTTACTGTTCAACATATTCGTCTGTCGAATACCATTT TAACAGTATCTACATTGTAGTTAGTATATATATACTTTCATTCTAACAGCAATGGATATC CCAATGGATGTCTATTAAAGAAAGGTGAGCAATATAGTTCAATACCTTTTC