Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053686_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:239029245:239032219:-1 gene:Zm00001d053686 gene_biotype:protein_coding transcript_biotype:protein_coding description:Integral membrane HRF1 family protein
Sequence	ATGACGTGGTTCTCTGTGGGATTAGAGGGGATGCCAAGGATCGTCACTGCCACCAATGAA CCCTTGAATATTGCATGGCATGTGCTAGGATGCTGTGGCAATGCCAAGGAGCCTGGATTG CATGGAGTCATTGGTGTAAAAGGACCAACGTCAGCGATTGGGAAGTGCTGCTGGGGGCTA GTTACCATGGCAGCGATGAATACTGGTATGGGAGGTTTAGGTGGCAGGCCGATACATCCA CAAGCAAATCCTTTTGGAACTGCCTTGCAGGGTGCTGGACCAGGATTGATCCGTACTGGG CTAGAAACATATGGCGGAAGGATTTTAGATTCAAGTTCTGAGTTTATGCAGAGCAATATA ACACAATATTTGTCCGACCCTCAGTACTACTTTCAAGTCAACAGCCAGTATGTGAGGAAC AAACTGAAGGTCATCTTGTTCCCTTTCTTGCACAGGGGTCACTGGACAAGAATAACTGAA CCAGTAGGAGGAAGGCTATCCTACAAACCTCCAGTCCAGGATATCAATGCACCGGACTTG TACATCCCTTTGATGGCATTTGGCACCTACATTGTAGCTGCTGGGTATGCCTTGGGTGTT CTTGGAAGGTTTACCCCTGAGGCACTGACCCTACAGTTTTCTAAAGGGATACTTGGGTGG TTTCTGCAAGTCGTCCTCATCAAAGGTCTGCTGTACTCCCTGGGAAGCGGCGAAGCTCCC TTGCTGGACATCGTGGCGTATGCTGGATATTGCTTCGCTGGCACTTCCCTTGCAATGGTG GCCCGCATCTTCTGGAGCTACCTGTATTACTTCATCATGCCATGGTTCTGCCTCTGCACG GGAGTCTTCCTTGTGAAGACCATGAAGAGGGTTCTTCTGGGCGGGCCAAGGAGCTACGAG AGACACCCCGGCCGGAACCACTACTTCCTGATCTTCTTGGCGGTCGTGCAATTCCCCATG CTGTTCTGGCTCGGCAACATATGTGGCTGA

Peptide Sequence

PEP ID	Zm00001d053686_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:239029245:239032219:-1 gene:Zm00001d053686 transcript:Zm00001d053686_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Integral membrane HRF1 family protein
Sequence	MTWFSVGLEGMPRIVTATNEPLNIAWHVLGCCGNAKEPGLHGVIGVKGPTSAIGKCCWGL VTMAAMNTGMGGLGGRPIHPQANPFGTALQGAGPGLIRTGLETYGGRILDSSSEFMQSNI TQYLSDPQYYFQVNSQYVRNKLKVILFPFLHRGHWTRITEPVGGRLSYKPPVQDINAPDL YIPLMAFGTYIVAAGYALGVLGRFTPEALTLQFSKGILGWFLQVVLIKGLLYSLGSGEAP LLDIVAYAGYCFAGTSLAMVARIFWSYLYYFIMPWFCLCTGVFLVKTMKRVLLGGPRSYE RHPGRNHYFLIFLAVVQFPMLFWLGNICG

Transcript Sequence

Transcript ID	Zm00001d053686_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:239029245:239032219:-1 gene:Zm00001d053686 gene_biotype:protein_coding transcript_biotype:protein_coding description:Integral membrane HRF1 family protein
Sequence	ATGACGTGGTTCTCTGTGGGATTAGAGGGGATGCCAAGGATCGTCACTGCCACCAATGAA CCCTTGAATATTGCATGGCATGTGCTAGGATGCTGTGGCAATGCCAAGGAGCCTGGATTG CATGGAGTCATTGGTGTAAAAGGACCAACGTCAGCGATTGGGAAGTGCTGCTGGGGGCTA GTTACCATGGCAGCGATGAATACTGGTATGGGAGGTTTAGGTGGCAGGCCGATACATCCA CAAGCAAATCCTTTTGGAACTGCCTTGCAGGGTGCTGGACCAGGATTGATCCGTACTGGG CTAGAAACATATGGCGGAAGGATTTTAGATTCAAGTTCTGAGTTTATGCAGAGCAATATA ACACAATATTTGTCCGACCCTCAGTACTACTTTCAAGTCAACAGCCAGTATGTGAGGAAC AAACTGAAGGTCATCTTGTTCCCTTTCTTGCACAGGGGTCACTGGACAAGAATAACTGAA CCAGTAGGAGGAAGGCTATCCTACAAACCTCCAGTCCAGGATATCAATGCACCGGACTTG TACATCCCTTTGATGGCATTTGGCACCTACATTGTAGCTGCTGGGTATGCCTTGGGTGTT CTTGGAAGGTTTACCCCTGAGGCACTGACCCTACAGTTTTCTAAAGGGATACTTGGGTGG TTTCTGCAAGTCGTCCTCATCAAAGGTCTGCTGTACTCCCTGGGAAGCGGCGAAGCTCCC TTGCTGGACATCGTGGCGTATGCTGGATATTGCTTCGCTGGCACTTCCCTTGCAATGGTG GCCCGCATCTTCTGGAGCTACCTGTATTACTTCATCATGCCATGGTTCTGCCTCTGCACG GGAGTCTTCCTTGTGAAGACCATGAAGAGGGTTCTTCTGGGCGGGCCAAGGAGCTACGAG AGACACCCCGGCCGGAACCACTACTTCCTGATCTTCTTGGCGGTCGTGCAATTCCCCATG CTGTTCTGGCTCGGCAACATATGTGGCTGACCTTTGATCCTATTGGTCGGGCCACAGACC TGTTTCTTCTTCTTCTTCAGAATAGGCATGTGCTACTTCTGGCTTGCTGATGAATCTTAG GTTTATCGTGGAGATGGTACAGAACTATTAGCTATAGATATCTGGGCAATCGAATTATAA ACTGTTTTTGTTTCTGTTAGCTATAGAGGCGAAAAGTAAAAACGATCGTTTGGGATAGGA TAAAGATGAACTGCTTCGTGTGTACCCTTTTGTGTCACGAGCGGCTAGCCACGACCCTGC AATCTGACTTGTTTTTTAATGATCACTGCTACTTGATCTTTCAGCTTTGGGTCGATATTT TCACTGCCGGTTTATTTAGTGGCCAG