Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053684_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:4:238979504:238988970:1 gene:Zm00001d053684 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative citrate synthase family protein

Sequence

ATGACACAATTTACCGCAGGAATAATGGCTCTTCAGGTTGAGAGCGAATTTCAAAAAGCT
TACGGCAATGGATTGCCAAAATCAAAGCTTTGGGAGCCTACTTATGAAGACTGCTTAAAT
TTGATTGCTCGGCTTCCACCAGTGGCTTCTTATGTTTACCGGAGAATTTTCAAGGATGGG
AAATCAATAGAAGCTGATGATTCTCTGGATTATGCGGCAAATTTATCACATATGCTTGGT
TTTGACGACCCCAGGATGCTGGAGCTGATGCGGCTCCATGTAACAATTCACGCTGATCAT
GAAGGCGGGAATATCAGTTCTCATACTGGTCATCTGGTTGGAAGTGCTCTGTCAGATCCT
TATCTTTCTTTCGCATCATCTGTGAATGGGTTAGCTGGGCCACTACATGGCCTTGCAAAT
CAGGAAGCGCTTCTATGGCTCAAGTCTATAATTCAGGAAACAGGGAGCGACGTTACGACA
GACCAACTCAAAGACTATGTCTGGAAGACACTGAAGAGTGGAAAGGTTGTTCATGGATTT
GGTCATGGAGTTCTGCGTAGGACGGACCCACGGTATCTATGCCAAAGGGAGTTTGCCCTG
AAGTATTTGCCAGAGGATCCGCTTTTCCAACTGCTGTCCAAGTTATATGAGGTCGTGCCT
CCGATCCTCACTGAGCTGGGAAAGGTCAAGAACCCATGGCCCAATGTTGACGCTCACAGT
GGACTCTTGCTGAACCACTTTGGACTATCTGAAACACGGTATCACACTGTCTTGTTCGGT
GTTTCGAGAAGCATGGGGGTAGGATCCCAGCTCATCTGGGACCGTGCCCTTGGCCTGCCA
CTCGAGAGGCCCAAGAGCGTTACCATGGAGTGGCTGGAGAACTACTGCAAGAACAAGGCT
GCCTGA

Peptide Sequence

PEP ID

Zm00001d053684_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:4:238979504:238988970:1 gene:Zm00001d053684 transcript:Zm00001d053684_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative citrate synthase family protein

Sequence

MTQFTAGIMALQVESEFQKAYGNGLPKSKLWEPTYEDCLNLIARLPPVASYVYRRIFKDG
KSIEADDSLDYAANLSHMLGFDDPRMLELMRLHVTIHADHEGGNISSHTGHLVGSALSDP
YLSFASSVNGLAGPLHGLANQEALLWLKSIIQETGSDVTTDQLKDYVWKTLKSGKVVHGF
GHGVLRRTDPRYLCQREFALKYLPEDPLFQLLSKLYEVVPPILTELGKVKNPWPNVDAHS
GLLLNHFGLSETRYHTVLFGVSRSMGVGSQLIWDRALGLPLERPKSVTMEWLENYCKNKA
A

Transcript Sequence

Transcript ID

Zm00001d053684_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:238979504:238988970:1 gene:Zm00001d053684 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative citrate synthase family protein

Sequence

AGGGTGGTGAACCTTTGCCTGAGGGTCTCCTCTGGCTTCTTTTGACAGGGAAGGTATATG
CCTGCCTATATTCATTTAATTTCGAATGTGCCAAAAGTGTTCCATAAAACTAGGAAAATA
TTTATTGTTGATTAAGAATGGGGAGTGGGGACACGATTTTGCTTATCTTTCTATTGCCAT
TCCTTTAATATTTTTCAGTGTTCGCCAATTCTTCCCCTCTTTCTGTAAGTTTTAAGCATG
TGGGGTTTTTCTTGTTCTAGGTCCCAACCAAAGATCAAGTTGATGCTCTATCAAAAGAAT
TGCTTGCGCGCTCAACTGTCCCAGCTCATGTCTATAAGGTAATAGATGCTCTCCCAGTAA
CTGCACATCCTATGACACAATTTACCGCAGGAATAATGGCTCTTCAGGTTGAGAGCGAAT
TTCAAAAAGCTTACGGCAATGGATTGCCAAAATCAAAGCTTTGGGAGCCTACTTATGAAG
ACTGCTTAAATTTGATTGCTCGGCTTCCACCAGTGGCTTCTTATGTTTACCGGAGAATTT
TCAAGGATGGGAAATCAATAGAAGCTGATGATTCTCTGGATTATGCGGCAAATTTATCAC
ATATGCTTGGTTTTGACGACCCCAGGATGCTGGAGCTGATGCGGCTCCATGTAACAATTC
ACGCTGATCATGAAGGCGGGAATATCAGTTCTCATACTGGTCATCTGGTTGGAAGTGCTC
TGTCAGATCCTTATCTTTCTTTCGCATCATCTGTGAATGGGTTAGCTGGGCCACTACATG
GCCTTGCAAATCAGGAAGCGCTTCTATGGCTCAAGTCTATAATTCAGGAAACAGGGAGCG
ACGTTACGACAGACCAACTCAAAGACTATGTCTGGAAGACACTGAAGAGTGGAAAGGTTG
TTCATGGATTTGGTCATGGAGTTCTGCGTAGGACGGACCCACGGTATCTATGCCAAAGGG
AGTTTGCCCTGAAGTATTTGCCAGAGGATCCGCTTTTCCAACTGCTGTCCAAGTTATATG
AGGTCGTGCCTCCGATCCTCACTGAGCTGGGAAAGGTCAAGAACCCATGGCCCAATGTTG
ACGCTCACAGTGGACTCTTGCTGAACCACTTTGGACTATCTGAAACACGGTATCACACTG
TCTTGTTCGGTGTTTCGAGAAGCATGGGGGTAGGATCCCAGCTCATCTGGGACCGTGCCC
TTGGCCTGCCACTCGAGAGGCCCAAGAGCGTTACCATGGAGTGGCTGGAGAACTACTGCA
AGAACAAGGCTGCCTGAAGCTTTTCACAAATGCTGCTGCTTTTTTTCCCCCCAGCCTTGG
CTGTTAATGATTAAACATGAGTTGTAGAACTATTCTTTTTCCCCCCATTGGCCGTTGAAT
AACGCAATAGCAGCGTGCTCTCGGGCGCTAGAATTCTGTATCTCTCCGTCACTTGGTGGA
CGTCCAGATAGACAGTTCATCTGCGGCAACACTGTGCAGAAGAGATTAGGACATTTCACT
TGGTTTATGTTTGGCAGAGTTAATCGGTAATTACAGATTTGGGCTATGGC