Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053664_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:238418653:238426106:1 gene:Zm00001d053664 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer envelope protein 80 chloroplastic
Sequence

ATGGGCTGCAGTCGCCATGTCCGTTTTGTCTCCTCCGGCGTCAAGCTACCGTCCGCGTCC
GCGCCATCCCCGTTCCCGGCGCCCGCTCCCGCGCTCCTCTCTGCGGCGCTCCCGTTCGCG
CACATCGGCCGCGCCATCGACGCCGCCGCGCGCCGCCTGGGCGCATGCCTGCCCCGCGTC
CCGGTTGCACGGGCCGACACGGCTCCGCCCCCGCCGCGGAGGCACGGGAAGGACGGCGGA
GGGGCCGAGGAGCGGGTGCTGATCAGCGAGGTTGCGGTGCGGGGAAAGGACGGGGAGCCA
CTGGAGCGGCCCGAGCTGGAGGCCGAGGCCGCGGCGGCGCTGCGCGCGTGCCGCCCCAAT
GCCGCGCTCACCGTGCGGGAGGTGCAGGAGGACGTGCACCGCATCGTCGAGAGCGGACTC
TTCCGATCGTGTATGCCCGTCGCTGTCGACACCCGTGATGGCATTCGCCTCGTCTTCGAG
GTGGAGCCGAACCAAGACTTCCATGGGCTGGTATGCGAGGGTGCCAACTTGCTACCGTCC
AAGTTCCTGGAAGATGCATTTTGTGTTCGCCATGGAAAAATTATTAACATTAGGCATCTG
GATCAAGTGATCAAGTCCGTCAATGGATGGTATCAGGAGCGTGGCCTAACTGGGTTGGTC
TCATATGCTGAGATACTTTCTGGAGGGATTCTGAGGCTGGAGGTTTCAGAAGCTGAGGTT
AATAACATTAGCATTCGCTTTCTAGACAGGAAGACTGGTGAACCAACACTTGGAAAAACA
CAGCCGGAAACCATCCTTCGGCAGCTTACCACCAGGAAAGGGCAGGCTTACAATAGGGCA
CAAGTGAAAAGGGATGTAGAAACAATACTTACTATGGGAATAATGGAGGATGTTACGATA
ATTCCACAACCAGTTGGAGATTCTAGTAAAGTGGACCTTGTCATGAATCTTGTTGAACGC
CCTTCGGGTGGTTTCTCTGCTGGTGGCGGAATTTCAAGTGGGATAACAAATGGACCCCTT
TCTGGACTTATTGGCAGCTTTGCGTATTCACATCGGAATGTTTTTGGGAGGAACAAGAAA
TTAAATCTCTCTTTGGAAAGGGGGCAAATCGATTCAATATTTAGATTGAACTTTACTGAC
CCTTGGATTGATGGTGACAACAAGAGAACCTCCAGAACTGTTATGGTTCAGAACTCTAGG
ACTCCTGGAACACTTGTCCATGGTGGTGATCATCCTGACCATGGGCCTATAACAATTGGA
CGTGTTACTGCTGGCTTGGAATATAGTCGACCATTCAGACCCAAGTGGAGTGGGACACTT
GGCTTAATTTTTCAGCATGCTGGCGCTCGTGATGATAAAGGGAATCCCGCCATCAGGGAT
TTCTATAACAGCCAATTAACTGCCAGTGGACATGATTATGATGATACATTGCTAGCTAAA
TTTGAAAGTATCTACACAGATTCTGGGGACCATAGCTCTGCAATGTTTGTTTTCAGCGTT
GAGCAAGGTCTCCCTGTTCTTCCTGAGTGGCTAAGCTTCAACAGAGTGACAACACGTTTG
AGGCAGGGCTATGAAATTGGTCCTGCTAGGCTTCTTCTAAGTGCCTCTGGAGGTCACGTG
GAGGGAAATTTTCCACCTCATGAAGCATTTGCAATTGGTGGGACAAATAGTGTAAGGGGA
TACGAAGAAGGTGCTGTTGGCTCTGGGCGTTCTTATGCTGTAGGTAGTGGTGAAGTGTCA
TGCCGCATGTTTGGGCCACTGGAAGGCGTGGTCTTTGGCGACTATGGTAGCGATCTTGGT
TCTGGTCCTAAAGTTCCTGGTGACCCAGCCGGAGCTCGTGGAAAGCCAGGTAGTGGCTAT
GGCTACGGTGTTGGCGTCCGCGTGGACTCCCCTCTGGGACCTCTGCGGCTTGAGTACGCC
TTCAATGATAGGCAAGCAAGGAGATTTCACTTTGGTGTTGGCTACAGAAATTGA

Peptide Sequence

PEP ID

Zm00001d053664_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:238418653:238426106:1 gene:Zm00001d053664 transcript:Zm00001d053664_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer envelope protein 80 chloroplastic
Sequence

MGCSRHVRFVSSGVKLPSASAPSPFPAPAPALLSAALPFAHIGRAIDAAARRLGACLPRV
PVARADTAPPPPRRHGKDGGGAEERVLISEVAVRGKDGEPLERPELEAEAAAALRACRPN
AALTVREVQEDVHRIVESGLFRSCMPVAVDTRDGIRLVFEVEPNQDFHGLVCEGANLLPS
KFLEDAFCVRHGKIINIRHLDQVIKSVNGWYQERGLTGLVSYAEILSGGILRLEVSEAEV
NNISIRFLDRKTGEPTLGKTQPETILRQLTTRKGQAYNRAQVKRDVETILTMGIMEDVTI
IPQPVGDSSKVDLVMNLVERPSGGFSAGGGISSGITNGPLSGLIGSFAYSHRNVFGRNKK
LNLSLERGQIDSIFRLNFTDPWIDGDNKRTSRTVMVQNSRTPGTLVHGGDHPDHGPITIG
RVTAGLEYSRPFRPKWSGTLGLIFQHAGARDDKGNPAIRDFYNSQLTASGHDYDDTLLAK
FESIYTDSGDHSSAMFVFSVEQGLPVLPEWLSFNRVTTRLRQGYEIGPARLLLSASGGHV
EGNFPPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGVVFGDYGSDLG
SGPKVPGDPAGARGKPGSGYGYGVGVRVDSPLGPLRLEYAFNDRQARRFHFGVGYRN

Transcript Sequence

Transcript ID

Zm00001d053664_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:238418653:238426106:1 gene:Zm00001d053664 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer envelope protein 80 chloroplastic
Sequence

TCCTCTCCGCGACGGGCGCCCATGGCCATGGCAGACGAAACCCTTGCGCCCTCGTCGTCG
TCGGCAAAGCCCTAAACTTTAGTCCACCTCCATTTCGGAACCTTAGCCGGGCGTTCCTGC
GCCGCTGCCATGGGCTGCAGTCGCCATGTCCGTTTTGTCTCCTCCGGCGTCAAGCTACCG
TCCGCGTCCGCGCCATCCCCGTTCCCGGCGCCCGCTCCCGCGCTCCTCTCTGCGGCGCTC
CCGTTCGCGCACATCGGCCGCGCCATCGACGCCGCCGCGCGCCGCCTGGGCGCATGCCTG
CCCCGCGTCCCGGTTGCACGGGCCGACACGGCTCCGCCCCCGCCGCGGAGGCACGGGAAG
GACGGCGGAGGGGCCGAGGAGCGGGTGCTGATCAGCGAGGTTGCGGTGCGGGGAAAGGAC
GGGGAGCCACTGGAGCGGCCCGAGCTGGAGGCCGAGGCCGCGGCGGCGCTGCGCGCGTGC
CGCCCCAATGCCGCGCTCACCGTGCGGGAGGTGCAGGAGGACGTGCACCGCATCGTCGAG
AGCGGACTCTTCCGATCGTGTATGCCCGTCGCTGTCGACACCCGTGATGGCATTCGCCTC
GTCTTCGAGGTGGAGCCGAACCAAGACTTCCATGGGCTGGTATGCGAGGGTGCCAACTTG
CTACCGTCCAAGTTCCTGGAAGATGCATTTTGTGTTCGCCATGGAAAAATTATTAACATT
AGGCATCTGGATCAAGTGATCAAGTCCGTCAATGGATGGTATCAGGAGCGTGGCCTAACT
GGGTTGGTCTCATATGCTGAGATACTTTCTGGAGGGATTCTGAGGCTGGAGGTTTCAGAA
GCTGAGGTTAATAACATTAGCATTCGCTTTCTAGACAGGAAGACTGGTGAACCAACACTT
GGAAAAACACAGCCGGAAACCATCCTTCGGCAGCTTACCACCAGGAAAGGGCAGGCTTAC
AATAGGGCACAAGTGAAAAGGGATGTAGAAACAATACTTACTATGGGAATAATGGAGGAT
GTTACGATAATTCCACAACCAGTTGGAGATTCTAGTAAAGTGGACCTTGTCATGAATCTT
GTTGAACGCCCTTCGGGTGGTTTCTCTGCTGGTGGCGGAATTTCAAGTGGGATAACAAAT
GGACCCCTTTCTGGACTTATTGGCAGCTTTGCGTATTCACATCGGAATGTTTTTGGGAGG
AACAAGAAATTAAATCTCTCTTTGGAAAGGGGGCAAATCGATTCAATATTTAGATTGAAC
TTTACTGACCCTTGGATTGATGGTGACAACAAGAGAACCTCCAGAACTGTTATGGTTCAG
AACTCTAGGACTCCTGGAACACTTGTCCATGGTGGTGATCATCCTGACCATGGGCCTATA
ACAATTGGACGTGTTACTGCTGGCTTGGAATATAGTCGACCATTCAGACCCAAGTGGAGT
GGGACACTTGGCTTAATTTTTCAGCATGCTGGCGCTCGTGATGATAAAGGGAATCCCGCC
ATCAGGGATTTCTATAACAGCCAATTAACTGCCAGTGGACATGATTATGATGATACATTG
CTAGCTAAATTTGAAAGTATCTACACAGATTCTGGGGACCATAGCTCTGCAATGTTTGTT
TTCAGCGTTGAGCAAGGTCTCCCTGTTCTTCCTGAGTGGCTAAGCTTCAACAGAGTGACA
ACACGTTTGAGGCAGGGCTATGAAATTGGTCCTGCTAGGCTTCTTCTAAGTGCCTCTGGA
GGTCACGTGGAGGGAAATTTTCCACCTCATGAAGCATTTGCAATTGGTGGGACAAATAGT
GTAAGGGGATACGAAGAAGGTGCTGTTGGCTCTGGGCGTTCTTATGCTGTAGGTAGTGGT
GAAGTGTCATGCCGCATGTTTGGGCCACTGGAAGGCGTGGTCTTTGGCGACTATGGTAGC
GATCTTGGTTCTGGTCCTAAAGTTCCTGGTGACCCAGCCGGAGCTCGTGGAAAGCCAGGT
AGTGGCTATGGCTACGGTGTTGGCGTCCGCGTGGACTCCCCTCTGGGACCTCTGCGGCTT
GAGTACGCCTTCAATGATAGGCAAGCAAGGAGATTTCACTTTGGTGTTGGCTACAGAAAT
TGACATGTATATTGATTACATTCAGATTCAGCCTTGTTCTTCTTAGCATTTTGGGCTGGT
AGAAGATAGTGCCATGCCTTCCAATTTTTGGCGTTTATCAAAGCAAATTTTGTTTAGATC
AGATTTCTTTTTTTCTGTAACATATAGTTTCCTTCTCCACTTCTGTCGAGTGTTCTCCAG
CTAGAGAAATTAGATGGCCCCCTGTAACGCCCTGAATTTGGGGTAAGATTTTTTCTTCTT
TTCTCTCACCAAATTCGGGTGTTACTCTCTTTTCTCTTTCCCCGTTTGCTCCTTCTCCCC
AATTTCAAACTAGTATAGCGACAGGTGTCCGTGTCATGTATAAACCAAAACCTAAGTGTC
ATGGGTGTTGCATCATGCCGAAGCACATTTCTTTGTCTG