Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053659_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:238361212:238365340:-1 gene:Zm00001d053659 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium ion binding protein

Sequence

ATGGGAGGTGTAATTAGTGGTGACTCACCAAGGCACACCTCGCCGGCATCTAAGTTAGAG
AAGAAGATGGTTGAAGCCATGCAGCAGAGAGCATTAAAAGGAACCTCAGTGAAATCATTG
AACAGTGTCATCATGAAATTTCCTAAGATCGACGAGAGTTTGAGAAAATGCAGGACTATC
TTTCAGCAATTTGATGAAGATTCCAATGGTGAAATAGATCAGCTGGAACTTAAGCATTGT
TTCCAAAATTTGGGCATTGAATCGACTGACCAGGAGATAAAAGATCTGTTTCAGGCATGT
GACATTTATGAGAACATGGGCATGAAGTTCAATGAGTTCATTGTCTTCCTGTGCCTTGTT
TATCTTCTAGATGATCCTGCAGTGTCTGAAGTTAGAAAAAGAATGGGGTTAGGTAGCCTT
GAACCAACATTTGAAACATTGGTCGAGTCTTTTGTCTTCTTGGACAAGAACAAAGATGGA
TATGTCAGCAAGAGCGAGATGATACAAGCAATAAATGAGACTATTGGAGGAGAGCGCTCT
TCTGGGCGCATAGGCATGAAAAGATTCGAGGAGATGGACTGGGACAAGAATGGAACGGTG
ACCTTCAAGGAATTCCTTTTCGCTTTCACTCACTGGGTGGGGATCAATAATGAAGAAGAC
GAGGACGAAGAAGAATGA

Peptide Sequence

PEP ID

Zm00001d053659_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:238361212:238365340:-1 gene:Zm00001d053659 transcript:Zm00001d053659_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium ion binding protein

Sequence

MGGVISGDSPRHTSPASKLEKKMVEAMQQRALKGTSVKSLNSVIMKFPKIDESLRKCRTI
FQQFDEDSNGEIDQLELKHCFQNLGIESTDQEIKDLFQACDIYENMGMKFNEFIVFLCLV
YLLDDPAVSEVRKRMGLGSLEPTFETLVESFVFLDKNKDGYVSKSEMIQAINETIGGERS
SGRIGMKRFEEMDWDKNGTVTFKEFLFAFTHWVGINNEEDEDEEE

Transcript Sequence

Transcript ID

Zm00001d053659_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:238361212:238365340:-1 gene:Zm00001d053659 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium ion binding protein

Sequence

GCGCATGCGTTTCACCGGGGCATCTGCTCTCGTAGGCTGCCCACCGCCCTCGGCGCCGGA
CGCGCCTCTGCTTCTCCTTCTCTCCATCCCATCCCATCCCCTCCCCTCCCACCGTATGCG
CAACCCGCGCCTCCCTTCCCGGTCCCCTCCCTCCACCACCCGCCCGCAGGCGCAGGCGTC
CCCCGTGACCCCGTCGATCGCCCCTCGGCCCTGCCGGTGGAGTTAGTGCTGGAGATCCAT
CCGGACTTGGATTTCTCCTCGGTCCAAGCAAGGAGGTTTTGGCACCATACAAGATCGTCG
AAATTGCGGAAATGGGAGGTGTAATTAGTGGTGACTCACCAAGGCACACCTCGCCGGCAT
CTAAGTTAGAGAAGAAGATGGTTGAAGCCATGCAGCAGAGAGCATTAAAAGGAACCTCAG
TGAAATCATTGAACAGTGTCATCATGAAATTTCCTAAGATCGACGAGAGTTTGAGAAAAT
GCAGGACTATCTTTCAGCAATTTGATGAAGATTCCAATGGTGAAATAGATCAGCTGGAAC
TTAAGCATTGTTTCCAAAATTTGGGCATTGAATCGACTGACCAGGAGATAAAAGATCTGT
TTCAGGCATGTGACATTTATGAGAACATGGGCATGAAGTTCAATGAGTTCATTGTCTTCC
TGTGCCTTGTTTATCTTCTAGATGATCCTGCAGTGTCTGAAGTTAGAAAAAGAATGGGGT
TAGGTAGCCTTGAACCAACATTTGAAACATTGGTCGAGTCTTTTGTCTTCTTGGACAAGA
ACAAAGATGGATATGTCAGCAAGAGCGAGATGATACAAGCAATAAATGAGACTATTGGAG
GAGAGCGCTCTTCTGGGCGCATAGGCATGAAAAGATTCGAGGAGATGGACTGGGACAAGA
ATGGAACGGTGACCTTCAAGGAATTCCTTTTCGCTTTCACTCACTGGGTGGGGATCAATA
ATGAAGAAGACGAGGACGAAGAAGAATGAGCGTGTCGGCTGAAGGAGATTCCTTTCCGAA
TCGACCGAGCCAGCCAGCCAGCCCCCCTCAGGGGAGGCCTCCAGCAGCTCCCTCCTGCCG
TGGATCAGAAGCGGTAGAGCTCATGTGTTCTCTGTGTGTGCCGAGCTGATGGTAGATGTT
CATGTTCGTATAAATAGAATGAAACACTAGCCGTGTCAAGGGATTTGCTGATAAAAAAAA
AGGTTACGCTGGTCAGACGCTGCTCAGTTAATTAGGTTACCTTGTCATTAATAAAGTATT
TGCAGTGTGTTTGGAAAATGTAAAACTGCGAATGGTACTACTAATCCTCTTTACTTCGAA
GTTGGTTGGTTG