Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053613_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:4:236483112:236493130:-1 gene:Zm00001d053613 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

ATGGCGGTGGACGAGGTGAATTCGGTCTACGTCGGCAGCCTTCCCTACGAGGCCAACGAG
GAGATGCTTCGCGACGCCTTCGGGTACTACGGCACCATCGTCTCCGTCAAGGTGATTAAT
GATCATACTATCAAAGGCAAGTGTTATGGTTTTGTTACTTTCACTCACCCCAGAGCTGCT
GAGCAAGCAATTGCAGGCATGGACGGCAAGAAATTAGGCAATCGTATTATTCGAGTAAAT
GAAGTGCGTACAAGAGGTCCCCGAGATTTTGGTCGAGATGGTTTTAGACGAGATCCAAGA
AGGTATGGTAGAGATCCATACTGGGACAGAAGGGATAGGGAACAGAGCTATGATCGTGAA
AGAGATCCCTACCATGACAGGGATAGTGATAGATCCCGCGAGCATGATAGAGAAAGAGAT
TATGAGCATGGTGGCTTTAATAGAGAAGTTGACTATCCCATGGATCGAGATCATGAAGTA
GACGACATACATCCTAGAGAACATGATCGTGCAGCAGAAACACATAATATGGATTCAGAT
AATGACAAATATAAGGAACATGGATCAAGAAAAAGCCACCCAAAAGGTCGTGATAGCAAA
GATTTATCGAGTTCCAGTGATCTTCAAAATGATGTAAGTGCATATTCGTTCTGTGCTATT
GTGAATGGGTTAGCCAGATTAAGGATAAAATCTCTGCGAAAGGTAAAAAAAAAAAACAAT
TTCCGCATCAAACTGCAGAAATTAGAGGACGAACTGGCTGCTGCACGGAAAGTCTCTTCA
GAACGACAATTAGCTGTTACAGACCTGTACAAACATTTTCTTCAACTCCAAGACTACAAC
GATAGGGTCAAAACAGCTGAACATAGGCTGCAGTCTCTTGTTGACGCTGCCATGGCCGAG
CTTGACATGGCCGAAGATGCTACTACCAGAGATGGCTCGATGTATGAGAACGGCGTGGTT
TGA

Peptide Sequence

PEP ID

Zm00001d053613_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:4:236483112:236493130:-1 gene:Zm00001d053613 transcript:Zm00001d053613_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

MAVDEVNSVYVGSLPYEANEEMLRDAFGYYGTIVSVKVINDHTIKGKCYGFVTFTHPRAA
EQAIAGMDGKKLGNRIIRVNEVRTRGPRDFGRDGFRRDPRRYGRDPYWDRRDREQSYDRE
RDPYHDRDSDRSREHDRERDYEHGGFNREVDYPMDRDHEVDDIHPREHDRAAETHNMDSD
NDKYKEHGSRKSHPKGRDSKDLSSSSDLQNDVSAYSFCAIVNGLARLRIKSLRKVKKKNN
FRIKLQKLEDELAAARKVSSERQLAVTDLYKHFLQLQDYNDRVKTAEHRLQSLVDAAMAE
LDMAEDATTRDGSMYENGVV

Transcript Sequence

Transcript ID

Zm00001d053613_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:236483112:236493130:-1 gene:Zm00001d053613 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

CCGAGTATCCGACAGTTCGCCTTCCCGTCTTTCCCTCTCCCCCCACACCCGGTCGTCGTC
GTCGCGGCGTGAGCGTCTGAGCGAGCGTGCGAGAGCGAGAGGGGGGAACACAAAACCCTA
GCACCGTCGCCGACGGACGCCAGAGTAGAGAGATGGCGGTGGACGAGGTGAATTCGGTCT
ACGTCGGCAGCCTTCCCTACGAGGCCAACGAGGAGATGCTTCGCGACGCCTTCGGGTACT
ACGGCACCATCGTCTCCGTCAAGGTGATTAATGATCATACTATCAAAGGCAAGTGTTATG
GTTTTGTTACTTTCACTCACCCCAGAGCTGCTGAGCAAGCAATTGCAGGCATGGACGGCA
AGAAATTAGGCAATCGTATTATTCGAGTAAATGAAGTGCGTACAAGAGGTCCCCGAGATT
TTGGTCGAGATGGTTTTAGACGAGATCCAAGAAGGTATGGTAGAGATCCATACTGGGACA
GAAGGGATAGGGAACAGAGCTATGATCGTGAAAGAGATCCCTACCATGACAGGGATAGTG
ATAGATCCCGCGAGCATGATAGAGAAAGAGATTATGAGCATGGTGGCTTTAATAGAGAAG
TTGACTATCCCATGGATCGAGATCATGAAGTAGACGACATACATCCTAGAGAACATGATC
GTGCAGCAGAAACACATAATATGGATTCAGATAATGACAAATATAAGGAACATGGATCAA
GAAAAAGCCACCCAAAAGGTCGTGATAGCAAAGATTTATCGAGTTCCAGTGATCTTCAAA
ATGATGTAAGTGCATATTCGTTCTGTGCTATTGTGAATGGGTTAGCCAGATTAAGGATAA
AATCTCTGCGAAAGGTAAAAAAAAAAAACAATTTCCGCATCAAACTGCAGAAATTAGAGG
ACGAACTGGCTGCTGCACGGAAAGTCTCTTCAGAACGACAATTAGCTGTTACAGACCTGT
ACAAACATTTTCTTCAACTCCAAGACTACAACGATAGGGTCAAAACAGCTGAACATAGGC
TGCAGTCTCTTGTTGACGCTGCCATGGCCGAGCTTGACATGGCCGAAGATGCTACTACCA
GAGATGGCTCGATGTATGAGAACGGCGTGGTTTGAACACCCAAAGGGGGCTGCCAGCTGT
CATGTCACGGCTTGTGAGGTTTACTAATTTGTTAGATTTGTAGTTTGGATTTGCCATGTA
TAATAGAACTGTACTGTAACTAGAAACGGGAAAATGTTGTGTAAGGATCAGGGAATGAAT
GGCTGCACAGTGCACATTT