Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053609_T078
CDS Infomation	cds chromosome:B73_RefGen_v4:4:236280574:236286855:1 gene:Zm00001d053609 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative coatomer beta subunit family protein
Sequence	ATGTGTACAAATGACTTCATTTGCTTCTATGATTGGGCAGAATGCAGATTGATACGTCGA ATCGATGTCAATGTGAAGAATCTTTACTGGGCTGACAGTGGTGATTTAGTAACAATTGCA AGTGATACGTCATTCTACATTTTGAAATATAATAGGGATGTAGTTTCATCTCATTTGGAT AGAGGGGGTTCAGCTGGTGAGGAAGGTGTGGAAGATGCCTTTGAACTGCTTCATGAGATC AACGAACGTGTCCGGACTGGGCTATGGGTTGGCGATTGTTTCATCTACAATAATTCTTCA TGGCGTCTTAATTACTGTGTAGGAGGAGAGGTCACAACTTTGTTTCACTTGGATCGGCCA ATGTATTTATTAGGATATCTTGCAAACCAAAGCCGTGTCTATCTTATTGATAAGCAATTT AATGTTGTGGGGTATACTTTACTCCTTAGTTTGATCGAATATAAAACACTTGTAATGCGT GGGGATTTCGATCGCGCGAATGATGTTTTATCATCTATACCAAAGGAACAATATGACAGT GTGGCGCGTTTCTTGGAATCACGGGGAATGTTGGAGGAAGCCCTCGAGATAGCAACTGAC ACTAATTACAGATTTGACCTGGCTGTGCAACTTGGTCGACTTGAAATTGCGAAGGCGATT GCTACCGAGGTGCAAAGTGAGTCCAAGTGGAAGATATTAGGGGAGTTAGCTATGTCAAGT GGAAAGCTTGAGATGGCAGAGGAGTGTCTTCTACATGCTATGGACCTCAGTGGTTTGTTG CTTTTGTATTCTTCCCTTGGGGATGCTGAAGGCATTAACAAATTGGCATCTGTAGCCAAA GAACAAGGAAAGAACAATGTTGCTTTCCTTTGTTTCTTCATGCTAGGAAAGCTGGAAGAG TGTCTTCAATTGCTAATAGAAAGCAATCGTATTCCGGAAGCAGCATTGATGGCAAGATCT TATCTTCCCAGCAAAGTCCCTGAGATTGTAGCATTGTGGAAAAAGGATCTCCAGAAGGTA AACTCAAAAGCAGCAGAGTCGCTGGCTGATCCTAATGAGTACCCAAACTTATTTGAAGAC TGGCAGATTGCTCTCAACGTAGAAGCTGCTGTTGCCTCTAAAAGGAGTATCTATCCATCG GCCGAGGAGTACATGATTCATGCTGAAAGGTCAAATGAGAGTTTAGTGGAAGCTTTTAAA AATATGCATGTACATGAAGAGATGGTACCAGATGATAATGAAGATACTGTTCACGAGGTT ATTGAGGATGGTGGAGTAGAGAGTCAAGAAGATGCTGTTGAGGTCGATGCAGAGGATGAC GGAGTAGAAGAAAGTCAAGATGAAGCTGTTGAGGTTGAGGCTGAGGGTTCAAGTGATGGT GCTGTCCTTGTGAATGGAAACAGTAGCGAGGAACAGTGGGTGCTGACTGAGCAATAG

Peptide Sequence

PEP ID	Zm00001d053609_P078
PEP Infomation	pep chromosome:B73_RefGen_v4:4:236280574:236286855:1 gene:Zm00001d053609 transcript:Zm00001d053609_T078 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative coatomer beta subunit family protein
Sequence	MCTNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDVVSSHLD RGGSAGEEGVEDAFELLHEINERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTLFHLDRP MYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEYKTLVMRGDFDRANDVLSSIPKEQYDS VARFLESRGMLEEALEIATDTNYRFDLAVQLGRLEIAKAIATEVQSESKWKILGELAMSS GKLEMAEECLLHAMDLSGLLLLYSSLGDAEGINKLASVAKEQGKNNVAFLCFFMLGKLEE CLQLLIESNRIPEAALMARSYLPSKVPEIVALWKKDLQKVNSKAAESLADPNEYPNLFED WQIALNVEAAVASKRSIYPSAEEYMIHAERSNESLVEAFKNMHVHEEMVPDDNEDTVHEV IEDGGVESQEDAVEVDAEDDGVEESQDEAVEVEAEGSSDGAVLVNGNSSEEQWVLTEQ

Transcript Sequence

Transcript ID	Zm00001d053609_T078
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:236280574:236286855:1 gene:Zm00001d053609 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative coatomer beta subunit family protein
Sequence	TTAGATCGCAGATGGTGATCGGTTACCGTTGGCCGTGAAGGAGTTGGGAAGCTGTGACCT TTATCCACAAAGTTTAAGGCACAATCCGAATGGGAGATTTGTAGTTGTATGTGGAGATGG AGAATACATAATATACACAGCCTTAGCATGGAGAAACAGATCATTTGGGTCTGCACTTGA ATTTGTTTGGTCAACTGATGGAGAATATGCCATCAGAGAAAGCACCTCGAGGATAAAGAT ATACAGTAAAAATTTCCAGGAGAAGAAAAGTATAAGGCCATCCTTTTCCGCTGAACGGAT ATTTGGTGGAGTGTTACTTGCTATGTGTACAAATGACTTCATTTGCTTCTATGATTGGGC AGAATGCAGATTGATACGTCGAATCGATGTCAATGTGAAGAATCTTTACTGGGCTGACAG TGGTGATTTAGTAACAATTGCAAGTGATACGTCATTCTACATTTTGAAATATAATAGGGA TGTAGTTTCATCTCATTTGGATAGAGGGGGTTCAGCTGGTGAGGAAGGTGTGGAAGATGC CTTTGAACTGCTTCATGAGATCAACGAACGTGTCCGGACTGGGCTATGGGTTGGCGATTG TTTCATCTACAATAATTCTTCATGGCGTCTTAATTACTGTGTAGGAGGAGAGGTCACAAC TTTGTTTCACTTGGATCGGCCAATGTATTTATTAGGATATCTTGCAAACCAAAGCCGTGT CTATCTTATTGATAAGCAATTTAATGTTGTGGGGTATACTTTACTCCTTAGTTTGATCGA ATATAAAACACTTGTAATGCGTGGGGATTTCGATCGCGCGAATGATGTTTTATCATCTAT ACCAAAGGAACAATATGACAGTGTGGCGCGTTTCTTGGAATCACGGGGAATGTTGGAGGA AGCCCTCGAGATAGCAACTGACACTAATTACAGATTTGACCTGGCTGTGCAACTTGGTCG ACTTGAAATTGCGAAGGCGATTGCTACCGAGGTGCAAAGTGAGTCCAAGTGGAAGATATT AGGGGAGTTAGCTATGTCAAGTGGAAAGCTTGAGATGGCAGAGGAGTGTCTTCTACATGC TATGGACCTCAGTGGTTTGTTGCTTTTGTATTCTTCCCTTGGGGATGCTGAAGGCATTAA CAAATTGGCATCTGTAGCCAAAGAACAAGGAAAGAACAATGTTGCTTTCCTTTGTTTCTT CATGCTAGGAAAGCTGGAAGAGTGTCTTCAATTGCTAATAGAAAGCAATCGTATTCCGGA AGCAGCATTGATGGCAAGATCTTATCTTCCCAGCAAAGTCCCTGAGATTGTAGCATTGTG GAAAAAGGATCTCCAGAAGGTAAACTCAAAAGCAGCAGAGTCGCTGGCTGATCCTAATGA GTACCCAAACTTATTTGAAGACTGGCAGATTGCTCTCAACGTAGAAGCTGCTGTTGCCTC TAAAAGGAGTATCTATCCATCGGCCGAGGAGTACATGATTCATGCTGAAAGGTCAAATGA GAGTTTAGTGGAAGCTTTTAAAAATATGCATGTACATGAAGAGATGGTACCAGATGATAA TGAAGATACTGTTCACGAGGTTATTGAGGATGGTGGAGTAGAGAGTCAAGAAGATGCTGT TGAGGTCGATGCAGAGGATGACGGAGTAGAAGAAAGTCAAGATGAAGCTGTTGAGGTTGA GGCTGAGGGTTCAAGTGATGGTGCTGTCCTTGTGAATGGAAACAGTAGCGAGGAACAGTG GGTGCTGACTGAGCAATAGTGGATTAACGGATCAGCAACTTCGCTTCAGCGGTGTAGTTT GTAAAGGTGAAATGCTATTCCAAGTGAACAATGACTCATACACCACCTTTGCAGTCGTAT TAAAGGTTGCTGACTGCTATAGAGTACATGATATCCATTTTTTCCCCAACGGTATTAATC AACACTTCCATCTTTGTGCCCGATAGGAAATTTTGTGCTTCCCTTTCTACATGTAGATCA GGCCTTAGGCGTCGAAGACATTTTATAGCCTACCATGAGGTACTCGTTTCACGGAGATGG TATATGATATAGGTGATCGGAGTGATATTTTACATGGTGCATATAGTAGCTTGTCGAACT GAGAATGTTTTACCTGTGATGTACATCGGACTTGGGAGCTTTGTATCA