Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053595_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:235825807:235832647:-1 gene:Zm00001d053595 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPD3 histone deacetylase homolog description: RPD3 histone deacetylase homolog
Sequence	ATGGACCCGTCATCGGCGGGCTCCGGCGGCAACTCCCTCCCGTCCGTCGGCCCCGACGGG CAGAAGCGGCGCGTGTGCTACTTCTACGACCCGGATGTGGGCAACTACTACTACGGGCAG GGCCATCCGATGAAGCCGCACCGCATCCGGATGACGCACTCGCTGCTGGCGCGCTACGGC CTCCTCAACCAGATGCAGGTGTACCGCCCCAACCCGGCCCGCGACCGCGACCTCTGCCGC TTCCACGCCGACGACTACATCAACTTCCTGCGCTCCGTCACGCCGGAAACGCAGCAGGAC CAGATCCGCCTGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTC TACAGCTTCTGCCAGACCTATGCGGGCGCCTCCGTCGGCGGGGCCGTCAAGCTCAACCAC GGCCATGACATCGCAATCAACTGGTCGGGGGGCCTGCACCACGCCAAGAAGTGCGAGGCG TCGGGCTTCTGCTACGTCAATGACATCGTGCTCGCCATACTCGAGCTGCTCAAGCATCAC GAGAGAGTTCTGTATGTCGATATCGATATCCACCATGGTGATGGAGTGGAGGAGGCTTTC TACACAACAGATAGGGTTATGACTGTCTCGTTCCACAAGTTTGGTGATTATTTCCCAGGA ACAGGGGATATCCGTGACATTGGGCACTCAAAAGGGAAGTACTACTCCCTGAATGTCCCT CTAGATGATGGGATTGATGATGAAAGCTACCAGTCCCTTTTTAAGCCAATCATGGGCAAA GTTATGGAGGTTTTCCGCCCTGGTGCAGTTGTGCTTCAGTGTGGTGCTGATTCCTTGTCT GGGGATAGGTTGGGCTGCTTCAACCTCTCAATCAAAGGTCATGCGGAATGTGTTAGGTAT ATGAGGTCTTTCAACGTTCCATTGTTGCTCCTTGGTGGTGGTGGATATACCATAAGAAAT GTTGCACGCTGTTGGTGTTATGAGGTATGA

Peptide Sequence

PEP ID	Zm00001d053595_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:235825807:235832647:-1 gene:Zm00001d053595 transcript:Zm00001d053595_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPD3 histone deacetylase homolog description: RPD3 histone deacetylase homolog
Sequence	MDPSSAGSGGNSLPSVGPDGQKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYG LLNQMQVYRPNPARDRDLCRFHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFDGL YSFCQTYAGASVGGAVKLNHGHDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHH ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVP LDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRY MRSFNVPLLLLGGGGYTIRNVARCWCYEV

Transcript Sequence

Transcript ID	Zm00001d053595_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:235825807:235832647:-1 gene:Zm00001d053595 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPD3 histone deacetylase homolog description: RPD3 histone deacetylase homolog
Sequence	CTACCATCGCCTGACCGACGCGCCCGTTTTCTCCTGAAAACAGAAGGCTCCGGCCTCCGG CATCCGCCAAAAAGGGGAAAAAAGGAGAGATAACACACACACACACAAACCCCAATCCCC TGCGGCGGCGATGGACCCGTCATCGGCGGGCTCCGGCGGCAACTCCCTCCCGTCCGTCGG CCCCGACGGGCAGAAGCGGCGCGTGTGCTACTTCTACGACCCGGATGTGGGCAACTACTA CTACGGGCAGGGCCATCCGATGAAGCCGCACCGCATCCGGATGACGCACTCGCTGCTGGC GCGCTACGGCCTCCTCAACCAGATGCAGGTGTACCGCCCCAACCCGGCCCGCGACCGCGA CCTCTGCCGCTTCCACGCCGACGACTACATCAACTTCCTGCGCTCCGTCACGCCGGAAAC GCAGCAGGACCAGATCCGCCTGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTT CGACGGCCTCTACAGCTTCTGCCAGACCTATGCGGGCGCCTCCGTCGGCGGGGCCGTCAA GCTCAACCACGGCCATGACATCGCAATCAACTGGTCGGGGGGCCTGCACCACGCCAAGAA GTGCGAGGCGTCGGGCTTCTGCTACGTCAATGACATCGTGCTCGCCATACTCGAGCTGCT CAAGCATCACGAGAGAGTTCTGTATGTCGATATCGATATCCACCATGGTGATGGAGTGGA GGAGGCTTTCTACACAACAGATAGGGTTATGACTGTCTCGTTCCACAAGTTTGGTGATTA TTTCCCAGGAACAGGGGATATCCGTGACATTGGGCACTCAAAAGGGAAGTACTACTCCCT GAATGTCCCTCTAGATGATGGGATTGATGATGAAAGCTACCAGTCCCTTTTTAAGCCAAT CATGGGCAAAGTTATGGAGGTTTTCCGCCCTGGTGCAGTTGTGCTTCAGTGTGGTGCTGA TTCCTTGTCTGGGGATAGGTTGGGCTGCTTCAACCTCTCAATCAAAGGTCATGCGGAATG TGTTAGGTATATGAGGTCTTTCAACGTTCCATTGTTGCTCCTTGGTGGTGGTGGATATAC CATAAGAAATGTTGCACGCTGTTGGTGTTATGAGGTATGATGATCTAAGTAGAAGTTAAC TTTCTTGAATCCTTATGACTTGTACTGCAGTTGTCAACATGAGTTGGTTAAGCTAACTGT CAGGGCCTAAGGAGGCCCACGAAGGGGCTGCGACATCAGCAACCATGGGCCCTCCATGGA AGATTAGATAAGGATAGTTAGAGATAAGATTAGAATATTAGTTGAGATTATTTAGATTAT CTAGAAATGTTATCAGTTAGTTTGTTGAGAGTTTTTAGGAGAGTTTTAAGGAGATAAGGA TCTCTAGCTAGACAGGGGCGGTCACCCGGCCTATTTATATAATCAATGGATGAGAAATAA AGTAGGCAAGAGTTAGAAGGGAGAAACCCTCTTGCTCGACCGTGGGCAGAGGCCCCCGAC CGATGTTCTTGTCCATCGATACCCCTCTCCAATCCCTCACTGATCTTGCGACCATAACAT CTGGTATCAGATAGCTTGGGTTTCGATCCGATCCCATGGCTTCTGCTGCCAATTTCGCGG CGGCGTCCTGGCAACCGGCGTCTCTATCTCCATGGGCTGCACCGCATGCCACCTTTGTCA CGCCATCCTGGCAACCAACGTCCCCATCTCTATGGGCAGCATCGCCTGCCAATTTTGTCA ACACATCCTGGACGTCGGTGCGCCCATCTTCACGGACAATGCCAAATTTCGTCACATCAT CTTCGTTGACGGTGTCTCCGTCCCCATGGACGGCGCCACTTGGGGCAGCCATGGCTCAAC AATCACCAGCTCCATCGATGGGGGACTTGTGGACTAACATAAGGGCTGATCTCGCAAAAA TGCAAGACTCGCTCCGGATGGTTGAGCAGGGGCTGCTGCAAATCAAGGCAGCAGTGCAAC ATGAACAACAATAGCTGGCGTTGTCCGCACGACTCCAGACGTCGGCGGCTGTGGGCATAC ATGCTGTTGCTCGTGGCTTCCTTGCACGACGGAGAGTGCGAGAGATGCGCCGGTAGATGC TCGAGGCAGCCATGGTGACGGTTGATCGCGGCACACGAGGGCGCGACCTCACCCTGTTGG CTGGCCATCAGCAGCGGCACCAAGCTGCTATCTCCAAGTGCGAGCATGATACGTGTCTCG TGGGCGACGAACTTCAACTCTACGACAACGACAGTAGGGAAGGCACTCCCCTCGTTATCG GTAAGGGACAGGGTACACTGTTTAGCGCCACCACATTCCGCTACCGACCGCCACGAGGGC GCCTCCGCTGGTTATTGTTGCGACCTATTCCAGGTGCCCGTCCATGTGCTCCCCACTCCC CTTTCGTCCAGATGGCGTCCATGGGATCTAGGTGGTTGCACACGTGCAAGTCAAATGCGC GGAGGGTGTCTGACTTATGGGGTAAAAAAAAATCAGATTCGGAATAATAAAATAAGCCGA GATGTAAAAGGTTTGTCTTCTAGGTGTCTGGTTTTGGGTCAAGTAGACTCGGTGTTTGAG CACCTGTCATGCTGCAGCTCGAGGACGAGTTGCTTGTCCAGGAGGGGTGTAGTGTCAGGG CCTAAGAGGCCCACGGAGGGGCTGCGACAGCAGCAACCATGGGCCCTCCAAGGAAGATTA GATAAGGATAGTTAGGGATAAGATTAGAAGATTAGTTGAGATTATTTAGGAGATTAGTTG AGATTATCTAGGAAGGTTATGAGTTAGTTTGTTGAGAGTTTTTAGGAGAGTTTTAAGGAG ATAAAGATCTCTAGCTAGATAGGACCGGCCAGCCGGCCTATTTATATAATCAATGGATGA GAAATAAAGTCGGCAAGAATTAGAAGGGAGAAACCCTCCTCTTGCTCGACCGTGGGCAGA AGCCCCCGGCCGACGTTCTTGCCCGTCGAATCGTCGATACCCCTCTCCAATCCCTCACCG ATCTAGCGACCATAACACTAATACTTGTTTATTGATGATTTGAAATGTGAGCTAGAACGT GCTAGAACCTGATGGGATTGTATGTTTTACTTCAGTCTGCACTTACTGTTAACAATTTCG TTCATAGAATACCAATGGCCCTGGTTTTGACTTTTGAGCTATACATGTAATACATGATTT AGGATGTTAGCGTATTCTCTTGCTGGAATGCATATGTTAAAGAGTATAGATGTGTATGAG CATACTGAATAACATAACTCCTTGTGTTCCTCAAATTATATTGGGGATTAGCAGAAGTGC TTTGTTAGTCGAACTTAAGTAGATTATTAGTAGATACAGAAAACAAATTAACTGACAGAT CACTTTCCTGGTGTACCAAGGGCACTATCTTAAAAAAATTAGATTGCAGATGTTAGAATG GAATATATTTGCCCTTCTGAGTTTTATGCTGCCTGTTTTTTGCTTCATCCATTTCATCCC TAAAAAAATATATTGTCCAGACTGGAGTTGCTCTTGGCCAAGAGCCTGAAGACAAGATGC CTGTTAATGAGTACTATGAATACTTCGGTCCAGATTACACTCTTCATGTTGCACCAAGTA ACATGGAGAACAAAAATACACGACAACAACTGGATGATATACGATCTAAACTTCTGGATA ATCTTTCAAAACTTCGACATGCTCCTAGTGTCCACTTTCAAGAGAGAGTTCCTGACACAG AAATACCTGAGGTGAGCAACTGAGCATCCTGTTATAACCAGTAAGACAATCGTGTGTCCC TTCACTAGTGCTAGCTGTGTTTTCCATTTATTTTAAAATTCTCGGTAGCTTTATCTCTAC CTGATGCAGATTCGGAAAAGCAAATTGGTAGTGATTCCTATATTTAGACATTATACTAGT TCTTGTATGCTTTAAATATCAGTAGCCGGAATTAGATCCTAACTGCCTAGTACTGATTGG ACAGCCTTCAGTACCTGGTAAAACTGTGGTGAGCACCTGTTCCTTGTATTACGTCTTATA GATCTGCTTTTAGAACATTGTTCTTTTCTTGTCAACCAAGGCTGGGAGGATGGTAGAAGC TTGTGCCTTTTTTGTACTACAAATACAAATGAACTAGTGTCCATTGTCGTTTAACATTGC CTTGCTCTATGTAGTAAATTTACCTGTTGATACAATGGACATGTTATGTGTTTCAACGCT GTGATATACATGCATGTGCTATACTTCTCAGCAGAGGTGGCATGGCAAGATAGTACACAC GTTCCATCCCCCCCCCCCCCCCCCCCCAATTTTTCATGGATTTCATCTTGTTTGATATTC AGTTACATTTGAATTATTCGTGTACCAGACACTGTTATAGTTTTCCACAGAATATTCATT AGTTTGAAGCACTTTTTGATGCTATTATTCTTCAAGCTTTCTATTGTGCTCCATGGCCTT AATCAGTCTGAATATTAGGTCAATAAAATGTTATCATGCTGAATTGATCATATATAATTT ATGCCAACATGAACAAAAACCGGATGAGATCGTTATGTTATCATGCTGAACTAAACATAT ATCATTTATGCCAACATGAACAAAAACTGGATGAGATCATTTATTTTAGTTCGTTTTATC TTCCAAGTCTTCAACTATCTACATAAAGTGATTGGAAGCTATCAGAAATGTAACTTCACA AATGATCTTTAGTGTCGGTTGAATTTGCCCTGGTATTCTATTGGAAATGATTAGTCAAAA CCTGATTGTTTTTTGGACATGTTTGGTGTACAGCAAGATGAAGATCAAGATGATCCAGAT GAACGACATGATCCTGACTCTGATATGGAAGTGGATGACCACAAGGCTGTGGAAGAGTCA TCGAGGAGGAGCATTCTAGGTATAAAAATCAAGAGAGAATTTGGTGAAAATGCGACCAGA GTACAGGATGGTGGCAGGGTTGCATCTGAACATAGAGGACTGGAACCCATGGCAGAAGAC ATTGGTTCCTCCAAGCAAGCTCCTCAGGCAGATGCCAGTGCAATGGCCATCGATGAACCA AGCAATGTCAAGAATGAACCTGAGAGCTCAACTAAATTGCAAGGCCAAGCAGCTGCGTAC CACAAGCCATAGCTGCGACCATCAAGAGTTGCTGGGTTTCTGCTAGGCAACTTCCTGCTT GATTTGGACAGTCCAGAAAACAGAAGTGAATCCGCAATACGTCCCTGCCATTTCAAATTT GACTTGGTTACACCTATCTGTGACAATGTTAATGTAATGAGATCCCATGGCACTAGTGAA GTTCCCAGGTGTCCACCTGGGATTGCTTGCGGTTGAGAGAGACGATAGTCTGATGACCCA TGTATACATGAAGCCCATGATCTCAGTTGTACAGTCATTAGCCAATACAAATATGCAGTG GACTAAAGGGTGA