Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053591_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:235612471:235617126:-1 gene:Zm00001d053591 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein CLP1 homolog
Sequence	ATGGCCGCCGCGACAACCGCGGGGGCCGGAGCCGCGACGCCGCAGCCGCCACGGCAGTAC AAGCTAGCTCCGCAGAGCGAGCTGCGTGTGGAGGTGCTCCCCGACGCGCCCCTCCGAGTG CGCCTCGTCACTGGCACCGCAGAGATCTTCGGCACCGAGCTGCCTCCGGAGGGCTGGGTC CCCGTCCCTCCCCGATCCAAGATCGCCATTTTCACCTGGCACGGCGCGACGGTGGAACTG GACGGGGTGAGCGAGAGCGAGTACACGTCTGACGAGACTCCAATGGTAATTTATGTCAAC ACGCACGCCATTCTGGATGCCCGCAGGGCAAGGGCGAGAACAGCCGCAGCTCAGGGGGGC GATAAGGAGGCATCACAGGGACCTAGAGTGATTGTTGTGGGGCCAACAGATTCTGGAAAA AGTACTCTCTGCAAAATGCTTCTTAGCTGGGCTGCCAAACTGGGCTGGAAGCCTACGTAT GTCGATTTAGATATTGGCCAGGGATCTATAACGATCCCTGGATGTATTTCTGCTACACCA ATTGAGAAACCTATAGATATAATTGATGGGATTCCCTTGGAGATGCCACTGGTATACTTC TATGGTCACCCAAATCCAAGTATTAATGCGGATGTTTACAAAGTTCTTATGAAGGAGCTA GCTAAAACATTGGAGAAACAGTTCTCTGGCAATGCTGAATCTAGGGCAGCAGGAATGGTT ATCAATACAATGGGGTGGGTTGAAGGCCTTGGGTATGAGTTACTTCTCAACGCAATTGAA ACCTTCAAGGCCAATGTAGTACTGGTACTGGGACAGGAGAAACTCTGGAAGATGTTGAAA GATGCAGTTCAAAGCAAGTCCAACATTGATGTTGTAAAACTTCATAAATCAGAGGGTGTT GTCCTCAGAAATTCAAAATATCGGCAAAGAACGAGAAGCTTCCGAATCAAGGAATACTTT TATGGGATTGCAAATGATCTTGCACCGCACTCAAACATTGTCAATTTCAGTGATGTCTCG GTGTATAAAATCGGTGGTGGCCATCAAGCTCCCCGTTCAGCATTACCTATCGGTGCAGAG CCTGTGGCAGATCCTACTCGACTTGTTGCTGTCAACATCAGCACGGATATGATCCATACA GTGCTTGCAATTTCCTATGCTAAGGAACCTGAAGAAATAATATCTAGCAATGTTGCCGGA TTCATTCATGTTACTGATGTTGACATCCAAAGGAAGAAGCTGACGTACATTGCACCTTGC CCGGGGGACTTGCCAAGCAGGTTGTTGATCGCGAGTTCACTTACATGGTATGAAGCGTGA

Peptide Sequence

PEP ID	Zm00001d053591_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:235612471:235617126:-1 gene:Zm00001d053591 transcript:Zm00001d053591_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein CLP1 homolog
Sequence	MAAATTAGAGAATPQPPRQYKLAPQSELRVEVLPDAPLRVRLVTGTAEIFGTELPPEGWV PVPPRSKIAIFTWHGATVELDGVSESEYTSDETPMVIYVNTHAILDARRARARTAAAQGG DKEASQGPRVIVVGPTDSGKSTLCKMLLSWAAKLGWKPTYVDLDIGQGSITIPGCISATP IEKPIDIIDGIPLEMPLVYFYGHPNPSINADVYKVLMKELAKTLEKQFSGNAESRAAGMV INTMGWVEGLGYELLLNAIETFKANVVLVLGQEKLWKMLKDAVQSKSNIDVVKLHKSEGV VLRNSKYRQRTRSFRIKEYFYGIANDLAPHSNIVNFSDVSVYKIGGGHQAPRSALPIGAE PVADPTRLVAVNISTDMIHTVLAISYAKEPEEIISSNVAGFIHVTDVDIQRKKLTYIAPC PGDLPSRLLIASSLTWYEA

Transcript Sequence

Transcript ID	Zm00001d053591_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:235612471:235617126:-1 gene:Zm00001d053591 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein CLP1 homolog
Sequence	ATAGCATTTCGATCCCGACACCCCAAAATCCCTCAGCCCTCTGGCCTCGGCGGCGCTCAA ACCTTCGCCGTCCCGCCGTCTCCAAAACCCTCTTACCATGGCCGCCGCGACAACCGCGGG GGCCGGAGCCGCGACGCCGCAGCCGCCACGGCAGTACAAGCTAGCTCCGCAGAGCGAGCT GCGTGTGGAGGTGCTCCCCGACGCGCCCCTCCGAGTGCGCCTCGTCACTGGCACCGCAGA GATCTTCGGCACCGAGCTGCCTCCGGAGGGCTGGGTCCCCGTCCCTCCCCGATCCAAGAT CGCCATTTTCACCTGGCACGGCGCGACGGTGGAACTGGACGGGGTGAGCGAGAGCGAGTA CACGTCTGACGAGACTCCAATGGTAATTTATGTCAACACGCACGCCATTCTGGATGCCCG CAGGGCAAGGGCGAGAACAGCCGCAGCTCAGGGGGGCGATAAGGAGGCATCACAGGGACC TAGAGTGATTGTTGTGGGGCCAACAGATTCTGGAAAAAGTACTCTCTGCAAAATGCTTCT TAGCTGGGCTGCCAAACTGGGCTGGAAGCCTACGTATGTCGATTTAGATATTGGCCAGGG ATCTATAACGATCCCTGGATGTATTTCTGCTACACCAATTGAGAAACCTATAGATATAAT TGATGGGATTCCCTTGGAGATGCCACTGGTATACTTCTATGGTCACCCAAATCCAAGTAT TAATGCGGATGTTTACAAAGTTCTTATGAAGGAGCTAGCTAAAACATTGGAGAAACAGTT CTCTGGCAATGCTGAATCTAGGGCAGCAGGAATGGTTATCAATACAATGGGGTGGGTTGA AGGCCTTGGGTATGAGTTACTTCTCAACGCAATTGAAACCTTCAAGGCCAATGTAGTACT GGTACTGGGACAGGAGAAACTCTGGAAGATGTTGAAAGATGCAGTTCAAAGCAAGTCCAA CATTGATGTTGTAAAACTTCATAAATCAGAGGGTGTTGTCCTCAGAAATTCAAAATATCG GCAAAGAACGAGAAGCTTCCGAATCAAGGAATACTTTTATGGGATTGCAAATGATCTTGC ACCGCACTCAAACATTGTCAATTTCAGTGATGTCTCGGTGTATAAAATCGGTGGTGGCCA TCAAGCTCCCCGTTCAGCATTACCTATCGGTGCAGAGCCTGTGGCAGATCCTACTCGACT TGTTGCTGTCAACATCAGCACGGATATGATCCATACAGTGCTTGCAATTTCCTATGCTAA GGAACCTGAAGAAATAATATCTAGCAATGTTGCCGGATTCATTCATGTTACTGATGTTGA CATCCAAAGGAAGAAGCTGACGTACATTGCACCTTGCCCGGGGGACTTGCCAAGCAGGTT GTTGATCGCGAGTTCACTTACATGGTATGAAGCGTGATCAGTCTAAGTTAGATGGGCCAT ATGCCCATACGCATGTTGTAAAGCCAGGACATGTGACGTTGGGACTGAGCGTTCGATGTC TACTGCTAACCAAGAGAAACGATGCAAGGACAAATATCCTGTTCCCTCGTGATTTACTGT GTTCTCGTTTCTTCTCTTATTATACGCCAACATCTACGGTGCGGTTGAGATAACAAATGG CGTGGTTTG