Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053575_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:4:234972689:234980630:1 gene:Zm00001d053575 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase domain superfamily protein

Sequence

ATGGAATATATTATTGATTTGATGGGAGCTCCAGGCACCTTAATCCCTTCAGACATTTCT
GGGAGTCAGTTTCAGGACTCCAACAATAGCCAATTGAGCAGTGATGCCATTGAAGAGAGT
GTAGCAGAATTGTGCTTAGCCCTTGAGCAGATTAATGGTGGATATGAGAACAAAAATACT
ATTGGAGGATGCTCATCTGGTCACAGTTCTATTTTAGCGCTCACGAGTTCACACCTGGGA
GATTTATCTCAGACAGAACTTAAACAAAATGTTGTTTCTGAGAAAAAAAATGATGGGGAT
ATTTCTGAGCATGTTAAGGTCGATGATGTTTCCAAGTATATTGTGCCTGAAGTAGTGGAC
CCACAGTTTGCACAAAATTTGCATGACTTACTTTTGGAGAGTGGTGCATTGCTACCCTCG
GATTTATTATCTGATCAAAATAATCATGACATTCACGAGAAAGAGAGTACAGGATGGTTA
TTAGTTGCTCAAACAACACAAAATTTGCCAAATGCTTTTGTAGCTAAAGATTCGTCATCG
CCTGATGAAGATGAACAACCCCGTGCAGAAAATACAGAAGCAGCCATCAGAGATTTGGAT
TTGCATGGTCATACTGCTAGTGTTATTTCCAATGAGGATCAAATGGTTGCTGGTTCTTTG
GTGAACATGTCAGGAAGTAGCAATGGAAATTTGGACACGTTGAGTTGGTCTAGTGTAAAA
ACGATCAGCTCTGTTATAGATGATATCGCTGAATACGAAATACCATGGGAAGATCTTGAT
ATTGGAGAACGTATTGGTTTAGGATCATTTGGGGAAGTTTATCGTGCAGACTGGAATGGC
ACGGAGGTTGCAGTGAAGAAATTTCTTGACCAGGATTTATCAGGTGTTTCACTAGAGCAA
TTTAAATGTGAAGTGAGAATCATGTCAAGGCTAAGGCATCCCAATGTTGTTCTTTTCTTG
GGATATGTGACACAATCGCCTAATCTCTCTATATTAACTGAGTACCTCCCAAGGGGGAGC
CTATATCGTCTGTTGCATAGGCCAAATAGTCGAATTGATGAAGTACGGAGGCTAAAAATG
GCATTCGATGTGGCAAAAGGGATGAACTACCTGCACTCTAGCCATCCTACCATTGTTCAC
CGTGACCTGAAATCCCCCAATCTTTTAGTGGATAAAAATTGGGTTGTTAAGGTGTCTGAC
TTTGGCATGTCCAGGTTGAAACATCATACTTTTCTTTCCTCTAAGTCAACTGCTGGAACA
GTAATACCCCTCACCCGTTAA

Peptide Sequence

PEP ID

Zm00001d053575_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:4:234972689:234980630:1 gene:Zm00001d053575 transcript:Zm00001d053575_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase domain superfamily protein

Sequence

MEYIIDLMGAPGTLIPSDISGSQFQDSNNSQLSSDAIEESVAELCLALEQINGGYENKNT
IGGCSSGHSSILALTSSHLGDLSQTELKQNVVSEKKNDGDISEHVKVDDVSKYIVPEVVD
PQFAQNLHDLLLESGALLPSDLLSDQNNHDIHEKESTGWLLVAQTTQNLPNAFVAKDSSS
PDEDEQPRAENTEAAIRDLDLHGHTASVISNEDQMVAGSLVNMSGSSNGNLDTLSWSSVK
TISSVIDDIAEYEIPWEDLDIGERIGLGSFGEVYRADWNGTEVAVKKFLDQDLSGVSLEQ
FKCEVRIMSRLRHPNVVLFLGYVTQSPNLSILTEYLPRGSLYRLLHRPNSRIDEVRRLKM
AFDVAKGMNYLHSSHPTIVHRDLKSPNLLVDKNWVVKVSDFGMSRLKHHTFLSSKSTAGT
VIPLTR

Transcript Sequence

Transcript ID

Zm00001d053575_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:234972689:234980630:1 gene:Zm00001d053575 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase domain superfamily protein

Sequence

GGACAGATGAAGGAGCTGTTAACTTGGTCAAAGTTGATTTTGACAGCATGGAATATATTA
TTGATTTGATGGGAGCTCCAGGCACCTTAATCCCTTCAGACATTTCTGGGAGTCAGTTTC
AGGACTCCAACAATAGCCAATTGAGCAGTGATGCCATTGAAGAGAGTGTAGCAGAATTGT
GCTTAGCCCTTGAGCAGATTAATGGTGGATATGAGAACAAAAATACTATTGGAGGATGCT
CATCTGGTCACAGTTCTATTTTAGCGCTCACGAGTTCACACCTGGGAGATTTATCTCAGA
CAGAACTTAAACAAAATGTTGTTTCTGAGAAAAAAAATGATGGGGATATTTCTGAGCATG
TTAAGGTCGATGATGTTTCCAAGTATATTGTGCCTGAAGTAGTGGACCCACAGTTTGCAC
AAAATTTGCATGACTTACTTTTGGAGAGTGGTGCATTGCTACCCTCGGATTTATTATCTG
ATCAAAATAATCATGACATTCACGAGAAAGAGAGTACAGGATGGTTATTAGTTGCTCAAA
CAACACAAAATTTGCCAAATGCTTTTGTAGCTAAAGATTCGTCATCGCCTGATGAAGATG
AACAACCCCGTGCAGAAAATACAGAAGCAGCCATCAGAGATTTGGATTTGCATGGTCATA
CTGCTAGTGTTATTTCCAATGAGGATCAAATGGTTGCTGGTTCTTTGGTGAACATGTCAG
GAAGTAGCAATGGAAATTTGGACACGTTGAGTTGGTCTAGTGTAAAAACGATCAGCTCTG
TTATAGATGATATCGCTGAATACGAAATACCATGGGAAGATCTTGATATTGGAGAACGTA
TTGGTTTAGGATCATTTGGGGAAGTTTATCGTGCAGACTGGAATGGCACGGAGGTTGCAG
TGAAGAAATTTCTTGACCAGGATTTATCAGGTGTTTCACTAGAGCAATTTAAATGTGAAG
TGAGAATCATGTCAAGGCTAAGGCATCCCAATGTTGTTCTTTTCTTGGGATATGTGACAC
AATCGCCTAATCTCTCTATATTAACTGAGTACCTCCCAAGGGGGAGCCTATATCGTCTGT
TGCATAGGCCAAATAGTCGAATTGATGAAGTACGGAGGCTAAAAATGGCATTCGATGTGG
CAAAAGGGATGAACTACCTGCACTCTAGCCATCCTACCATTGTTCACCGTGACCTGAAAT
CCCCCAATCTTTTAGTGGATAAAAATTGGGTTGTTAAGGTGTCTGACTTTGGCATGTCCA
GGTTGAAACATCATACTTTTCTTTCCTCTAAGTCAACTGCTGGAACAGTAATACCCCTCA
CCCGTTAATGTTTTTATTTGTTCATATTGATTGTTTTATTGTTTGAAATGCCAGTCCTAA
TCACAAATAAGTGGTACTCTGGAACTTTGAAGAACAACTTTGATTATTACTATTTTGTTG
CAAAGTAGTTATAAAGCTTAGCAAAAATGTACTTTAATAAAACTCTTCTGAGACAAATCT
GCTTGTGTCATTTTCAAATATCCAAACCCAATACATAAAAGTTCATTTATCCAAATCCAA
AACTTCACTTATTTATGAGTAGAGGGAGGATAAACATAGAATATACTACAGCTAACAGCT
AGAACACTGACCTCGTACACGTTCACCAAATGAAAGAGGTGTTAAGCGATACAGGATAGA
ATAACACAAACGCAACCCACTTAGATAAACTTAAGAAAAAAGATGAGAGAGTGTAGTTGG
CATTCATGATGGTGGATCCTGGTTATACTATACTCTTGTCCGCTAAATTGCCAACTGAAA
CATGACACATGTTCTACATAAAAGTACATCTTTGTTTTGAAGATCATTAGAGTACGTATT
TTGGAATTGGCTAGGAAGGGATACTGAATTCTTTTGTAGAGCATTAGAGTACTTGTCTTG
AGATAGGCTGGGAAGGGAGACATCATTATTTTGTAGAGCATTGGAGTACTCATTTTGGAA
TAGGTTTGGAATGGCAATATAGTGCTAGTTCAAAACACATCATTTCAGCATGCAATCTAA
AATGCACTTGATCTAGGTCTAATGCATGACTACAAAAAATGACCATCTTTTGCAAATAGC
AAAGCTATCTTGAGATTAAATTGATTTCTGGTTGCATAGGGACACAGATCCGCACAAGTA
AAATATTTCCCATAGTTCCATTTCTTAGGTAGCTGCATAATGCACTATGTAGACCCTGTT
TGGATCAGCTAGAGTTTGTGTATTGTGGCTTTAAAAGCTCTAGCTGGTCCTGTTAGACAT
ATATGTGTTTATATATGCGTGTATATAGCTGGACTGGGCCCTGGGCCGTGCGCCTCCTGC
CCTCCTATAGCCTGCTGACCTTCTCTGTTGGTTATCGATAGGAATAGGGGAGATCTTGAT
TGGTTATGTTTCTATATACCATGATTAAATAATCTACTATTTCCGTGCAACACCTATTGC
TTTCATGGTATCATGAGTTTTGGGTTAATATATATGTGTGTACATAGCGTGGCTGGGCCT
GTGCTGTGCACCTCCTATTTCTTGTTGGGTTATGTTTCTATCAGCAGAGGCCTTCTCCTC
TGTTGCTGTTGATTATGGATAGGAATAAGGGAGGAGATCTTGTTGGGTTATGTTTCTATA
AACCCAAGATCTGCTCCGGACTATGTATACATGTACGCCTGTACCTTGATTAATCAATCT
ACTATTTCCACGCATTACACAATCCCTATTACTTTCAGGTTCAAACGGGCCAGCTTGTGG
AAGCAGCTTTTAATCCACGAGCCATAGTTATCCAAGCAGCTTTTAACAGTTTTAGTCCAG
ACTGTGACAATCCCAGAATCCATCTTCTCCTAACTTCTTTCAGCTTTTAACAATCCACAA
TTTACTAGCCAGATTTTTGAAGTCTTCAGCTTGTCCAACGGGACTTAAATGTTAGCATAA
TTATTTCATGCATCTATGTTTAACTTCAAACCCCTGCTTTTGTTTGATGGAAAAACAGGC
ATATGCATAGACATTGGTTCCAGATTTTGTTGGTGGTGCCCTATGTTTTTTTTTCTCGAA
AGCGCAGGGGAACTGCGCATTTAATTATATTAAGAAGAGGAGAAACATAATACATAGTAC
ATGGTGGTGCCCTATGTTGTACAAGAATACTGCCTTCTGTTCTTTTTCTCGTTCTGCATT
GCATTTTTCTATAAATATACCTATTATCACATCTTTACGAAACATTTCTTGTTGCTTGCA
GCCAGAGTGGATGGCACCTGAGGTACTACGAAATGAACCATCTAATGAGAAGTGAGTTGT
TGAGTTGCACGGACATGTTGCTTTTTTTTTATTGCTGTTGTTTCGGCGAAAGCTGAATGT
TTTGTGCCATTAGGTGTGATGTCTACAGCTTTGGAGTAATCCTGTGGGAACTAGCAACTA
TGCGTGTGCCATGGAGTGGGTTGAATCCAATGCAAGTTGTAGGAGCAGTTGGATTCCAGA
ACAGGCGACTAGAGATCCCCAAGGATGTGGATCCACAGGTGGCTAGCATAATATCTTCAT
GTTGGGATAGCGATCCGAGCAAAAGGCCGTCGTTCTCCCAGCTCTTGTCCCCTCTAAAGC
AACTACAACATTTAGTTGTTACAGAAAGCTGCTGACATGCGTTTCCTGGGACAAATCTCA
GGATACATATATTCAAGTATTTAAGCTCTGTTACAGGGCTAAAATTTTCTTTTTTGAAGC
TCGTGGAGGAGTCTCTGCGGTATAGATGTGTTTGGGCGAAGGTTCTGCACATCAGTAATC
ATCACCTTGTGAAAATGCGAGTCTCTGAAGCCGTGCAAAGGCGCTGCTGGAGAAAGCGTA
GTGTGTAGTCTCAAGTGAAGAAAAGTGGTGCGACACAAAGTGTTCTGTGCCATGGTAAAT
AATTGTTCAGTTCTGGATTTGAACGGGTGATAAATTCACCACAAAGATAGGATCTTGAAG
TTTTTTCCCCTTGCCTTACAAAAGATGGAAAGTGAAGTGAAAAAAAATTCACGGTGTCTG
CAAAAAGTCGCAGCCCGATGCCACGTGAAAATGTATATGATGTAATACAGTTGCTTTGGA
AAGGCAAACATAAAGTTCACAGTTTTGT