Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053561_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:234194672:234201038:1 gene:Zm00001d053561 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGCCCCGCCGCCTAGCTACGACCTACGCCGGCCGCATCGCCGCCGCGACGCCGTCCCCC TCGGGCCCTTCCATCACCGTCACCGTCTCGCCGACACCGGCCCCCACCCCTCTTGACACG CGCGGATATTCCCTACCGCGCCGCCACCTCATCTGCGCCGTTGCCCGAATCCTCCGCTCC CCGGTGTCACACACCCCGCTGCTTGACCTCGATGACTACCTCCGCTCTCTCCGCCTCACT CTCACCACCGCGGAGGCTTCTGAGGTCATGAAGGCGCTCGCCCCCGACACCTCTCTCGCG CTCAGCTTCTTCCGCTTCGCCGCCACCTCCCTCCCCGGCTTCCGGCACGATGCCTTCTCC TATAACCGCATCCTGGTCCTCCTCTTCAGCAACCGCGCCGATCCCGCCGAGGCCATGCGG CTCATCGCGGAGATGGAGCGCGACGGCGTGCCCGGCAACATCTCCACCGTGAATTTGCTG GTCGGGATGGGCGTGGAGGTGGGGAGGTGCCTGGACCTGGCAAGTAAGTGGGGGCTCAGG CTGAACGGGTACACCTACAAGTGCCTTGTGCAGGCGCATCTGAGGAGTCGGGAGGTGTGG AAGGGGTTCGAGGTATATGAGAAGATGCGGAGGAAGGGCTACAAGCTGGACATATTTGCA TATAACATGCTGCTTAATGCGCTTGCCAAGGCTGGAATGGTTGACCAAGCTTACCAAGTC TTTGAAGATATGAAACAAAACTACTGTGATCCAGATGCATACACATACACTATACTAATT AGAATGTCTGGAAAGGCTGGGAAGACCACTAAATTTGTCTCATTGTTGGAGGAAATGGTG TCCGAAGGATGTGTTCTTAATCTGATTGCTTATAATACTGTTATTGAGGCTCTTGGTAAG AACAAGATGGTTGACGAGGCGATTTTTATGCTTTCTAAAATGATTGAGAGTGACTGTCGG CCCAATCAATTCACATATAGCATTATGCTGGATGTTTTATCAACAGGGGGACAACTCCAC AGGTTGAATGAGATTCTAGATATTTGTAGTGGATGTCTGAATAGGCCAGTTTATTCTTAT TTGATCAAGGCACTCTGCAAATCTGGTCATGCAAGTGAGGCTCATAGTGTATTCTGCCGT ATGTGGAATTCCCATGAAAAAGGAGACCGGTATGCTTTTGTATCAATGCTTGAGGCACTA TGCAATGCAGAAAAGACAACAGAGGCTATTGATCTACTGCATATGATGCCTGAAAAGGGG ATTACTACAGATGTTGGAATGTATAATATGATATTTTCTGCTCTTGGGAAGCTGAAGCAG GTGTCTTTCATGAGCAGCCTCTATGATACGATGAGAGCCAATGGTGTTGTTCCTGATGTT TTCACGTACAATATTATGATTTCAAGTTTTGGTAGGGTTGGCTTAGTTGATAAGGCATCT GAACTTTTTGAGGAAATGGAGGATGGCAGTTGCAAGCCTGATGTCGTCACCTATAATTCT ATGATAAATTGTCTTGGGAAAAATGGAGATCTCGATGAAGCCCACATGCTTTTCAAAGAT ATGCAAGAGAAAGGATATGATCCTGATGTCTTCACTTACAGCATATTGATTGAGTGCTTT GGGAAATCCAATAAGGTTGATATGGCATGCAGCTTGTTTGATGAGATGGTTGCACAGGGG TGCATTCCTAATATTGTAACCTATAACATTTTACTAGACTGTTTAGAGAGACGAGGGAAG ACAACAGAAGCTCATAAATTTTATGAAACTCTGAAGCAACAGGGATTGACTCCAGACTCG ATAACTTACTCAATACTTGAGAGATTGGAAAGTAGATCTCAACGAACAGTAAGAATACGT AAACCAAGCCGGAATACAGGCTGGGTTATAAGTCCAGTGTGA

Peptide Sequence

PEP ID	Zm00001d053561_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:234194672:234201038:1 gene:Zm00001d053561 transcript:Zm00001d053561_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MPRRLATTYAGRIAAATPSPSGPSITVTVSPTPAPTPLDTRGYSLPRRHLICAVARILRS PVSHTPLLDLDDYLRSLRLTLTTAEASEVMKALAPDTSLALSFFRFAATSLPGFRHDAFS YNRILVLLFSNRADPAEAMRLIAEMERDGVPGNISTVNLLVGMGVEVGRCLDLASKWGLR LNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQV FEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGK NKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVYSY LIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKG ITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKAS ELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECF GKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDS ITYSILERLESRSQRTVRIRKPSRNTGWVISPV

Transcript Sequence

Transcript ID	Zm00001d053561_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:234194672:234201038:1 gene:Zm00001d053561 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	AGTTCAGTTCAGCTTCAGTCGCCCCTAAACCCCAATCCACGCCGGCCCAAAATGCCCCGC CGCCTAGCTACGACCTACGCCGGCCGCATCGCCGCCGCGACGCCGTCCCCCTCGGGCCCT TCCATCACCGTCACCGTCTCGCCGACACCGGCCCCCACCCCTCTTGACACGCGCGGATAT TCCCTACCGCGCCGCCACCTCATCTGCGCCGTTGCCCGAATCCTCCGCTCCCCGGTGTCA CACACCCCGCTGCTTGACCTCGATGACTACCTCCGCTCTCTCCGCCTCACTCTCACCACC GCGGAGGCTTCTGAGGTCATGAAGGCGCTCGCCCCCGACACCTCTCTCGCGCTCAGCTTC TTCCGCTTCGCCGCCACCTCCCTCCCCGGCTTCCGGCACGATGCCTTCTCCTATAACCGC ATCCTGGTCCTCCTCTTCAGCAACCGCGCCGATCCCGCCGAGGCCATGCGGCTCATCGCG GAGATGGAGCGCGACGGCGTGCCCGGCAACATCTCCACCGTGAATTTGCTGGTCGGGATG GGCGTGGAGGTGGGGAGGTGCCTGGACCTGGCAAGTAAGTGGGGGCTCAGGCTGAACGGG TACACCTACAAGTGCCTTGTGCAGGCGCATCTGAGGAGTCGGGAGGTGTGGAAGGGGTTC GAGGTATATGAGAAGATGCGGAGGAAGGGCTACAAGCTGGACATATTTGCATATAACATG CTGCTTAATGCGCTTGCCAAGGCTGGAATGGTTGACCAAGCTTACCAAGTCTTTGAAGAT ATGAAACAAAACTACTGTGATCCAGATGCATACACATACACTATACTAATTAGAATGTCT GGAAAGGCTGGGAAGACCACTAAATTTGTCTCATTGTTGGAGGAAATGGTGTCCGAAGGA TGTGTTCTTAATCTGATTGCTTATAATACTGTTATTGAGGCTCTTGGTAAGAACAAGATG GTTGACGAGGCGATTTTTATGCTTTCTAAAATGATTGAGAGTGACTGTCGGCCCAATCAA TTCACATATAGCATTATGCTGGATGTTTTATCAACAGGGGGACAACTCCACAGGTTGAAT GAGATTCTAGATATTTGTAGTGGATGTCTGAATAGGCCAGTTTATTCTTATTTGATCAAG GCACTCTGCAAATCTGGTCATGCAAGTGAGGCTCATAGTGTATTCTGCCGTATGTGGAAT TCCCATGAAAAAGGAGACCGGTATGCTTTTGTATCAATGCTTGAGGCACTATGCAATGCA GAAAAGACAACAGAGGCTATTGATCTACTGCATATGATGCCTGAAAAGGGGATTACTACA GATGTTGGAATGTATAATATGATATTTTCTGCTCTTGGGAAGCTGAAGCAGGTGTCTTTC ATGAGCAGCCTCTATGATACGATGAGAGCCAATGGTGTTGTTCCTGATGTTTTCACGTAC AATATTATGATTTCAAGTTTTGGTAGGGTTGGCTTAGTTGATAAGGCATCTGAACTTTTT GAGGAAATGGAGGATGGCAGTTGCAAGCCTGATGTCGTCACCTATAATTCTATGATAAAT TGTCTTGGGAAAAATGGAGATCTCGATGAAGCCCACATGCTTTTCAAAGATATGCAAGAG AAAGGATATGATCCTGATGTCTTCACTTACAGCATATTGATTGAGTGCTTTGGGAAATCC AATAAGGTTGATATGGCATGCAGCTTGTTTGATGAGATGGTTGCACAGGGGTGCATTCCT AATATTGTAACCTATAACATTTTACTAGACTGTTTAGAGAGACGAGGGAAGACAACAGAA GCTCATAAATTTTATGAAACTCTGAAGCAACAGGGATTGACTCCAGACTCGATAACTTAC TCAATACTTGAGAGATTGGAAAGTAGATCTCAACGAACAGTAAGAATACGTAAACCAAGC CGGAATACAGGCTGGGTTATAAGTCCAGTGTGATAACCTACCCTGGATCTTTCAGTTGCA TACCTCCGGTGTAGTGGGGCTGAGGACAAATAGTCTGTATGCATTATGCAAACTTGCAAG TATATTGCTGGTCAATAATGTCAGCAAGTGACTACTCAATTACCGTGAAAACAATATAGT AGTCCTGACTCATCAGAATTATATGTATATAATAGTATTGCATGGCTGCTGATATTTGAT ATCTTGGTTCTGAACAATTCGTGGAAGATGGACATCTTGAGAACAGGTAAAAACATCTCT ACTTTGTCATCGTATTAGAGGAATGATTTCAAGATGTGAGGATCTATCTTTGGAAGCTCA GAGTTAGTACCTAGATTCATATTTGTTAAAACCAGATCAGGCCAGCAGTTTAGCTCGGAA AAGATGGAACCAGAGAACCAGTTAGTTCTGGCTGCAGTTTTGGTCTTTGGATCATTTTTT ATGCATCTAAAAAACTAAGGCTGGTGTGGGTCATAGATGGAAGGTTGTGTACTTATGTGC ACCGCGGAAGGGAATTATGAAGAAGACACGTTCCATTTTCTCTTTGTGCAACATCGCTGT AGCCTTGGCAGTTCCTTTACTTATGTGAATGTGAATGTATGTGAGAACTGTTCCTGTTCA GATGAAACATAACCTTCTCCTTAATCTGCCAACAAGCTTTAGCATAGCAAAGTACTCTTT TATTAAATCTTTTGATGTATACAATTGTACATTAGCCTAGGAAAAAGTTCTCCTTGAATA GTGGAAAGGAGTTGTGCGATCAGCAAGCGTATTCGTAACACTGTTCGATTTGCTTTCATA TGATTTGTTGTTAAGTAAGGTGTTATGAGAAATGACTTTGCCCTCAGTGCACTATTTGTT CAACTACCTAGCATGGCAGTATCCATTATTTTTGTGAGGTGCCGCCGTCTATGTCACCAA TGAGGTGTCGATCTAGAGTAATCAAATCATATTCCTTCGACAGAATTTTTTGTTTGCAAA GACAAAGATATGCTTCAAGTTTTGAGAAGTTGTGAATAATTTTCTAGTCCATCATGCTAT GGATGAATTTTTCTTGGGTTATGATCTGTTGCTGTCAATGTTTAGAAGCAACACAAGAAC ATTAGAGACTGCTCAAACCTGTTAGACAACCCGAACATCTCTGGAACCATGTGAAGTGAA ATATTCTTCTTTTATTTTAACCAATTCCTAGAATGATTATCATAGTTCATCTTCATGTCA TTTTTCTAGAAGCTAAACATGTTATTTTTCTTGCACCAATTCAGTGTTTCAATGCTTCAT TGTGATGGTTTGTATATATCCCTAGATGCACCAGTGTACAGTGGGATTCTAAAGTAAATA ATAATGGAAAAAGTGAGGAGAATGTCGGAGTTGATACAGTAAGAGATGATAAAAGTAGAT TTAAAAATGAAATACACAAAGGTTTTGTCTTGAATAAGAGAATAGAAATCAGTTATCCAC GTGTATGAACCTTAATTTATGCTTTTGAGTAAAATAGGTAAGGACTATATGAGGTCTATA AATGTATTTCTGAGCCATTAATGTTATCTTTTGCTAAATTACAGGTCTGTACCCCTTCAG TCTACTCTAAAATCTGACGTGGTGTCGACCTAGATAGTCCACTACGGCAAGAGTTGGTCA TGTTAGGTTGGAATATGCATATAACTCATGTTGAGTTTGCATGCAATGGGCAAAACAAGG AATTACCCCACAGTGAAACAAGACCACACTTAGGGGTGGTAATGAATCACCATCCAAATT GAATGTTTCTTCACAATTCATTTGATACCTTAATTAATTTTTAGTTAGAAAATAAATAAA AATAGAGCATGATTCTAATATGATCTGATCCTTAAATTTTATAGTGTAAAACTTATAGCC ATTACTAAAACTGTCTCTTCAGGTTAATCAGCATCATCATCTGTATTCTACACTTGAGTC CCTTCCAATGCTTGAAAACAAGTACTGGTCAGCAGGAGGATAATTAATGTACGACGTGTT TGATGCTGGCCTGCGCCAGGGGAAGGATGCACGGTGATGCCGTCCAGTGTTCGGTGACGT GGTCGGTTCTAGGGTCAAGACCGACGAGAGCGCGCATTCATCATGCCATCACAATCCCAG GGTTGTGCAAGCTACGTGATGCAGACCGGGCACTCAAGGTGCTAGGGACGAAGAGAGGAT GGAGGCAGGGTTGGAGCCGTGCGAGCTAACGTACAATTCTGTGGTGGATGTGCTTGTGAA GGTGGGGCAAATGGGTGAGGCAACTAGACTCATTCAAGCTGATTGATGGGGTGACACAAG AACAGATCAAGGTGTGGCTGGGTTCTAACAAAAGTATTTAACAGAAGGTGGTCAGTGCCT TACATGATCGGGCACTTGGATGTCAAATCTATCGGTGTGTCAAATCTACTTTCAGCTGGC CTGGAAGGGAAGAACAGATCAAAGCATATGTGCAGTCCTGCTACCATA