Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053548_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:4:233637509:233640570:-1 gene:Zm00001d053548 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	ATGATTGAAGGGAGTGATCCGGTCACAGGCCATATAATCTCGACAACCATTGGAGGGAAG AATGGAGAGCCTAAAAGGACTATCAGCTACATGGCAGAGAGAGTTGTGGGAACTGGATCA TTTGGAATCGTCTTCCAGGCAAAATGTCTGGAGACTGGTGAGACTGTTGCGATTAAGAAG GTTTTGCAGGACAAGCGCTACAAGAACAGGGAGCTACAAATCATGCGATCCATGGATCAC TGCAATGTTGTTTCCTTGAAGCATTGCTTCTTCTCTACCACAAGCAGAGATGAACTTTTC CTTAACTTAGTGATGGAGTTTGTTCCCGAGTCATTATATCGGGTGTTGAAACATTACAGC AATATGAACCAGAGGATGCCACTCATTTATGTCAAATTATATACCTACCAGATATTTCGA GGCTTAGCCTATATTCACACAGTACCTGGAGTTTGCCACAGGGATGTGAAACCACAAAAT CTTTTGGTTGATCCACTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATG TTGGTCAAAGGTGAAGCAAACATATCATATATATGTTCACGTTATTACCGTGCTCCAGAG CTCATATTTGGGGCAACTGAGTACACAACATCAATTGATATTTGGTCAGCTGGATGTGTT CTTGCTGAGCTGCTTCTTGGCCAGCCTCTCTTCCCTGGTGAAAGTGCTGTGGATCAGCTT GTTGAGATAATAAAGGTTCTTGGTACCCCAACGCGCGAGGAAATCCGATGTATGAATCCA AACTACACCGAGTTTAGATTTCCTCAGATCAAAGCTCACCCATGGCACAAGGTATGTGAA ATTTATTTATCATGTTATATCATTGAATGGTAG

Peptide Sequence

PEP ID	Zm00001d053548_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:4:233637509:233640570:-1 gene:Zm00001d053548 transcript:Zm00001d053548_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	MIEGSDPVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETVAIKK VLQDKRYKNRELQIMRSMDHCNVVSLKHCFFSTTSRDELFLNLVMEFVPESLYRVLKHYS NMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKICDFGSAKM LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGESAVDQL VEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVCEIYLSCYIIEW

Transcript Sequence

Transcript ID	Zm00001d053548_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:233637509:233640570:-1 gene:Zm00001d053548 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	AGCATGCTGGTTCTATGATTGAAGGGAGTGATCCGGTCACAGGCCATATAATCTCGACAA CCATTGGAGGGAAGAATGGAGAGCCTAAAAGGACTATCAGCTACATGGCAGAGAGAGTTG TGGGAACTGGATCATTTGGAATCGTCTTCCAGGCAAAATGTCTGGAGACTGGTGAGACTG TTGCGATTAAGAAGGTTTTGCAGGACAAGCGCTACAAGAACAGGGAGCTACAAATCATGC GATCCATGGATCACTGCAATGTTGTTTCCTTGAAGCATTGCTTCTTCTCTACCACAAGCA GAGATGAACTTTTCCTTAACTTAGTGATGGAGTTTGTTCCCGAGTCATTATATCGGGTGT TGAAACATTACAGCAATATGAACCAGAGGATGCCACTCATTTATGTCAAATTATATACCT ACCAGATATTTCGAGGCTTAGCCTATATTCACACAGTACCTGGAGTTTGCCACAGGGATG TGAAACCACAAAATCTTTTGGTTGATCCACTGACTCACCAAGTGAAGATATGTGATTTTG GGAGTGCCAAAATGTTGGTCAAAGGTGAAGCAAACATATCATATATATGTTCACGTTATT ACCGTGCTCCAGAGCTCATATTTGGGGCAACTGAGTACACAACATCAATTGATATTTGGT CAGCTGGATGTGTTCTTGCTGAGCTGCTTCTTGGCCAGCCTCTCTTCCCTGGTGAAAGTG CTGTGGATCAGCTTGTTGAGATAATAAAGGTTCTTGGTACCCCAACGCGCGAGGAAATCC GATGTATGAATCCAAACTACACCGAGTTTAGATTTCCTCAGATCAAAGCTCACCCATGGC ACAAGGTATGTGAAATTTATTTATCATGTTATATCATTGAATGGTAGAAAACTTAAACTA AAATACCTTTGCTCTTGCAGATTTTCCACAAGCGGATGCCTCCAGAAGCTATAGATCTCG CTTCACGCTTGCTCCAGTATTCACCAAATCTAAGATGCACTGCTCTTGAAGCGTGTGCAC ATCCATTCTTTGACGATTTGCGAGAACCACATGCGAGGTTGCCAAATGGACGGCCATTTC CTCCACTGTTCAACTTTAAACAGGAACTAGCAAATGCCTCCCCAGAGCTCATCAACAGGT TGATCCCAGACCATGCTAGGCGGCATCTTGGGCTCACATTATTGCCCGCTACTGGACCAT AGGCGAAGGCTCTATGGTGGT