Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053548_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:233637162:233640804:-1 gene:Zm00001d053548 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	ATGATTGAAGGGAGTGATCCGGTCACAGGCCATATAATCTCGACAACCATTGGAGGGAAG AATGGAGAGCCTAAAAGGACTATCAGCTACATGGCAGAGAGAGTTGTGGGAACTGGATCA TTTGGAATCGTCTTCCAGGCAAAATGTCTGGAGACTGGTGAGACTGTTGCGATTAAGAAG GTTTTGCAGGACAAGCGCTACAAGAACAGGGAGCTACAAATCATGCGATCCATGGATCAC TGCAATGTTGTTTCCTTGAAGCATTGCTTCTTCTCTACCACAAGCAGAGATGAACTTTTC CTTAACTTAGTGATGGAGTTTGTTCCCGAGTCATTATATCGGGTGTTGAAACATTACAGC AATATGAACCAGAGGATGCCACTCATTTATGTCAAATTATATACCTACCAGATATTTCGA GGCTTAGCCTATATTCACACAGTACCTGGAGTTTGCCACAGGGATGTGAAACCACAAAAT CTTTTGGTTGATCCACTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTGCCAAAATG TTGGTCAAAGGTGAAGCAAACATATCATATATATGTTCACGTTATTACCGTGCTCCAGAG CTCATATTTGGGGCAACTGAGTACACAACATCAATTGATATTTGGTCAGCTGGATGTGTT CTTGCTGAGCTGCTTCTTGGCCAGCCTCTCTTCCCTGGTGAAAGTGCTGTGGATCAGCTT GTTGAGATAATAAAGGTTCTTGGTACCCCAACGCGCGAGGAAATCCGATGTATGAATCCA AACTACACCGAGTTTAGATTTCCTCAGATCAAAGCTCACCCATGGCACAAGATTTTCCAC AAGCGGATGCCTCCAGAAGCTATAGATCTCGCTTCACGCTTGCTCCAGTATTCACCAAAT CTAAGATGCACTGCTCTTGAAGCGTGTGCACATCCATTCTTTGACGATTTGCGAGAACCA CATGCGAGGTTGCCAAATGGACGGCCATTTCCTCCACTGTTCAACTTTAAACAGGAACTA GCAAATGCCTCCCCAGAGCTCATCAACAGGTTGATCCCAGACCATGCTAGGCGGCATCTT GGGCTCACATTATTGCCCGCTACTGGACCATAG

Peptide Sequence

PEP ID	Zm00001d053548_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:233637162:233640804:-1 gene:Zm00001d053548 transcript:Zm00001d053548_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	MIEGSDPVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETVAIKK VLQDKRYKNRELQIMRSMDHCNVVSLKHCFFSTTSRDELFLNLVMEFVPESLYRVLKHYS NMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKICDFGSAKM LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGESAVDQL VEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKIFHKRMPPEAIDLASRLLQYSPN LRCTALEACAHPFFDDLREPHARLPNGRPFPPLFNFKQELANASPELINRLIPDHARRHL GLTLLPATGP

Transcript Sequence

Transcript ID	Zm00001d053548_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:233637162:233640804:-1 gene:Zm00001d053548 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	AGGTTTGTGATGTATGTTTTGTCTTGTTGCGATTTCAGTTCTGTTTGTGGATAAGGATTT TCTGAATTGTTGAGTTTTCATTTCTAGCAAGCCTAGTTTGTGTGAATTAGCAATAGTTAG ATGGCTGTAATTCCCCAATTCTACTACCTTGTGCCGCAGTCCTCGGCATTTTAAGAAGGG TACCATGTCTCGGCTATGTGCTGCCACCTTTTTTTATGGATTTTACTTTGTGACAGCATG CTGGTTCTATGATTGAAGGGAGTGATCCGGTCACAGGCCATATAATCTCGACAACCATTG GAGGGAAGAATGGAGAGCCTAAAAGGACTATCAGCTACATGGCAGAGAGAGTTGTGGGAA CTGGATCATTTGGAATCGTCTTCCAGGCAAAATGTCTGGAGACTGGTGAGACTGTTGCGA TTAAGAAGGTTTTGCAGGACAAGCGCTACAAGAACAGGGAGCTACAAATCATGCGATCCA TGGATCACTGCAATGTTGTTTCCTTGAAGCATTGCTTCTTCTCTACCACAAGCAGAGATG AACTTTTCCTTAACTTAGTGATGGAGTTTGTTCCCGAGTCATTATATCGGGTGTTGAAAC ATTACAGCAATATGAACCAGAGGATGCCACTCATTTATGTCAAATTATATACCTACCAGA TATTTCGAGGCTTAGCCTATATTCACACAGTACCTGGAGTTTGCCACAGGGATGTGAAAC CACAAAATCTTTTGGTTGATCCACTGACTCACCAAGTGAAGATATGTGATTTTGGGAGTG CCAAAATGTTGGTCAAAGGTGAAGCAAACATATCATATATATGTTCACGTTATTACCGTG CTCCAGAGCTCATATTTGGGGCAACTGAGTACACAACATCAATTGATATTTGGTCAGCTG GATGTGTTCTTGCTGAGCTGCTTCTTGGCCAGCCTCTCTTCCCTGGTGAAAGTGCTGTGG ATCAGCTTGTTGAGATAATAAAGGTTCTTGGTACCCCAACGCGCGAGGAAATCCGATGTA TGAATCCAAACTACACCGAGTTTAGATTTCCTCAGATCAAAGCTCACCCATGGCACAAGA TTTTCCACAAGCGGATGCCTCCAGAAGCTATAGATCTCGCTTCACGCTTGCTCCAGTATT CACCAAATCTAAGATGCACTGCTCTTGAAGCGTGTGCACATCCATTCTTTGACGATTTGC GAGAACCACATGCGAGGTTGCCAAATGGACGGCCATTTCCTCCACTGTTCAACTTTAAAC AGGAACTAGCAAATGCCTCCCCAGAGCTCATCAACAGGTTGATCCCAGACCATGCTAGGC GGCATCTTGGGCTCACATTATTGCCCGCTACTGGACCATAGGCGAAGGCTCTATGGTGGT GCTTCGTTGTGCGGAAGGCAACCTGCATTCAAGGTGTAGAATCTGACAATTATTGGAAGG TCAAACATGAGCTGGCGCGTAAGGAGAGGTGGTATGTTCTCGTGCAGCCAGCCTTAATTT GTCGCATGTCTTAATGCAAAAATCTGATTTTTGCCCAAGTAGTGAGAGGAGGGAAGGGGG TGGTCGGTGTATTGTTAAGCTATTGAAGGAATTCGATCCCTGCTATTGTGTTACTTTCTC CAACGTTTAAACGTTGTAGTGCGCCTGTAAGTGTTCCATATATCCCCTGTTGTCAGTCAG TGTAATTCTGTAAATGTTATTAATGGGAAATTATTTCGTGCTTTTCC