Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053452_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:232176363:232182440:1 gene:Zm00001d053452 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyadenylate-binding protein-interacting protein 9
Sequence	ATGGTGGCAGTGGAGGTTGTGCCGGCGTCCGCGGAGTCCCCGATTCCGATCGAGGCTAAG GCCGCGGTGACGTCGGAGGCGGAGGCGGAGGCCGAGGGCGAAGTGGAGGCGGAGATGAAG GGTGATGCGGCAGCTACGGCGGGAGAAACGGAGGAGGAGGAGGAGGAGGAGGAGAAGGTG TACAAGAGCGACCTGAAGAAGCTGGAGAACCTCATGTCCAAGCTTAACCCCTGCGCGCAG GAGTTCGTGCCGTCGTCGCGCCGCACGGCCCCAGCCGCCGTGGCGGCGGCGAAGCCGGCG GGAGGAAGGGTGCTCTCAGCCGACGCGCCCGTGTTCGTGTCCGCCGCCGAGTACTACGGC GCTGCCGGCGGGCACCTGGAGATAGGCGGCGGCGGCGGCGGCGGCAAAGTCGTCGTTGGC GGCGGGGGCAGGGACTCCAGCAGCGACGGATCCAGCAACGGCGGCGGCGGCGGCAGTCGC CACCAACCGAATCGCCGGAGGAGGAACAGCTTCAACCACGGGAGGCGGAGGGGGGCCGGA GGCCGGCCCCGGCGGGGTGATAGGGAGGACAGCGTGCGGCGGACCGTCTACGTGTCCGAC ATTGATCAACATGTGACCGAGCAGAAGCTCGCTGAAGTGTTCTCCAACTGCGGGCGAGTG GTAGATTGCCGTATCTGTGGCGACCCCCACTCTGTCCTACGCTTTGCGTTCATCGAGTTT TCTGACGATGGTGGCGCAAGAGCGGCGCTAACACTCGCGGGAACCATACTTGGCTGCTAT CCTGTCAGAGTTTTGCCTTCTAAAACAGCAATTCTACCTGTCAACCCGAAATTTCTTCCT CAGACTGATGATGAGAAAGAAATGGTATCAAGGACTGTATATTGTACTAACATAGACAAG AAGGTTACGGAGGAGGATGTAAAGGGTTTCTTCCAGCAAGCCTGCGGGAAGGTTTCTCGG CTGAGGCTCCTTACTGACATAGTACACTCCACATGCATTGCTTTTGTTGAGTTTGCTCAG GCTGAAAGTGCAATTATGGCATTAAACTTTAGTGGTATGGTCCTTGGCTCACTTCCTATC AGGGTGAGCCCTTCCAAAACTCCAGTCCGTCCACGTTCTCCTCGTGTGATGTCCAATTGA

Peptide Sequence

PEP ID	Zm00001d053452_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:232176363:232182440:1 gene:Zm00001d053452 transcript:Zm00001d053452_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyadenylate-binding protein-interacting protein 9
Sequence	MVAVEVVPASAESPIPIEAKAAVTSEAEAEAEGEVEAEMKGDAAATAGETEEEEEEEEKV YKSDLKKLENLMSKLNPCAQEFVPSSRRTAPAAVAAAKPAGGRVLSADAPVFVSAAEYYG AAGGHLEIGGGGGGGKVVVGGGGRDSSSDGSSNGGGGGSRHQPNRRRRNSFNHGRRRGAG GRPRRGDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEF SDDGGARAALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDK KVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMALNFSGMVLGSLPI RVSPSKTPVRPRSPRVMSN

Transcript Sequence

Transcript ID	Zm00001d053452_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:232176363:232182440:1 gene:Zm00001d053452 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyadenylate-binding protein-interacting protein 9
Sequence	GCCGTATCTGCAGTTCTCGACCTCTCCTCCCCCCCCCCCCCCCCCCCTCCCTCCCTCTTG CATCACTATCACCACCAACAACAAGGCTAACGCACACCAATCCAACAAGGAGAACAAAAA ACAATTAATCGTGTTTTGAGCTTTTGATATCATCTCGTTCCAGTTAAGTGCGTGAAGAGG CAATAATGGTGGCAGTGGAGGTTGTGCCGGCGTCCGCGGAGTCCCCGATTCCGATCGAGG CTAAGGCCGCGGTGACGTCGGAGGCGGAGGCGGAGGCCGAGGGCGAAGTGGAGGCGGAGA TGAAGGGTGATGCGGCAGCTACGGCGGGAGAAACGGAGGAGGAGGAGGAGGAGGAGGAGA AGGTGTACAAGAGCGACCTGAAGAAGCTGGAGAACCTCATGTCCAAGCTTAACCCCTGCG CGCAGGAGTTCGTGCCGTCGTCGCGCCGCACGGCCCCAGCCGCCGTGGCGGCGGCGAAGC CGGCGGGAGGAAGGGTGCTCTCAGCCGACGCGCCCGTGTTCGTGTCCGCCGCCGAGTACT ACGGCGCTGCCGGCGGGCACCTGGAGATAGGCGGCGGCGGCGGCGGCGGCAAAGTCGTCG TTGGCGGCGGGGGCAGGGACTCCAGCAGCGACGGATCCAGCAACGGCGGCGGCGGCGGCA GTCGCCACCAACCGAATCGCCGGAGGAGGAACAGCTTCAACCACGGGAGGCGGAGGGGGG CCGGAGGCCGGCCCCGGCGGGGTGATAGGGAGGACAGCGTGCGGCGGACCGTCTACGTGT CCGACATTGATCAACATGTGACCGAGCAGAAGCTCGCTGAAGTGTTCTCCAACTGCGGGC GAGTGGTAGATTGCCGTATCTGTGGCGACCCCCACTCTGTCCTACGCTTTGCGTTCATCG AGTTTTCTGACGATGGTGGCGCAAGAGCGGCGCTAACACTCGCGGGAACCATACTTGGCT GCTATCCTGTCAGAGTTTTGCCTTCTAAAACAGCAATTCTACCTGTCAACCCGAAATTTC TTCCTCAGACTGATGATGAGAAAGAAATGGTATCAAGGACTGTATATTGTACTAACATAG ACAAGAAGGTTACGGAGGAGGATGTAAAGGGTTTCTTCCAGCAAGCCTGCGGGAAGGTTT CTCGGCTGAGGCTCCTTACTGACATAGTACACTCCACATGCATTGCTTTTGTTGAGTTTG CTCAGGCTGAAAGTGCAATTATGGCATTAAACTTTAGTGGTATGGTCCTTGGCTCACTTC CTATCAGGGTGAGCCCTTCCAAAACTCCAGTCCGTCCACGTTCTCCTCGTGTGATGTCCA ATTGATCAGGCTGCTACCAATAGCAAATCATCCTAGGCAGAGCTTATTGTAGCTATGATC GCCCTAGAACCCACTTCACGGATCAATGACGTCGTTGTCCTGAGAGTGTCCAAGTCAGTC ATAGGAAACCAACTTGTTGCCAAATGCTAATGTTTTTCTGTTTGCCAGATCCATGCACCA TTTCCCTTCTTTTTTTCATTCCCCCTTATGTTAATTATGAACATAATTGTTTATAATCGC CTTTCTCAGGCATCAGAATAAGAATGAATAACTCTGGTATTTTTTTGTTGTAC