Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053416_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:230820849:230823728:-1 gene:Zm00001d053416 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable inactive dual specificity protein phosphatase-like

Sequence

ATGAAAGAGATGGAAACCAGTCAGACGGCCAACTTGGGGATTCATCAGGAGCTGGGACCA
GAGATCAGTCAAAATCCCATGGGAAATCATGTTAACCCAGAAAAGGAAACTAATGAAATT
CCAGGATCTGAGGTTAACCAAGAGCTTGTGGAAATATGCCAGGGCGCAGTGGTGGAAACT
GATACGATCCAAGAAAATCAAGCTGTTCCAGAGGCAGGCTTAGAGGTTAATGAAGAGACT
GTGGAAACATGCCAGGAAACAGCTGCAGAATCTGATGTTAACCTAGAGAAGCAAACTTCT
GATCCAGGTGTTATTTACCGCTGCAGAAAATGCCGGAGAATGCTTGCAACACAAGAATTT
GTTGTTACCCATGAAGTAGGTGCAGGTGGCAAAAGCTTCAGAGCAGGCAAACGGTCTAAT
GTGCATGAGGATGATGAGAAACCAGAATGTCCATGCATCTTCGTGGAGCCCATGAAGTGG
ATGCAAACTGTGGAAGAAGGATATGTTGCGAAAAAGCTCTTTTGCATGGGATGTAAAGCT
CGTCTGGGACAGTTCAATTGGGCTGGTATGCAGTGCAGCTGCGGAGCCTGGGTGATTCCA
GCATTTCAGCTGACCAAAAGTAAGATCGACCAATGCTCAATGTAA

Peptide Sequence

PEP ID

Zm00001d053416_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:230820849:230823728:-1 gene:Zm00001d053416 transcript:Zm00001d053416_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable inactive dual specificity protein phosphatase-like

Sequence

MKEMETSQTANLGIHQELGPEISQNPMGNHVNPEKETNEIPGSEVNQELVEICQGAVVET
DTIQENQAVPEAGLEVNEETVETCQETAAESDVNLEKQTSDPGVIYRCRKCRRMLATQEF
VVTHEVGAGGKSFRAGKRSNVHEDDEKPECPCIFVEPMKWMQTVEEGYVAKKLFCMGCKA
RLGQFNWAGMQCSCGAWVIPAFQLTKSKIDQCSM

Transcript Sequence

Transcript ID

Zm00001d053416_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:230820849:230823728:-1 gene:Zm00001d053416 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable inactive dual specificity protein phosphatase-like

Sequence

TGCCTCCAGCAGTCCAGCCGCGTCTCCCGCTCTCGTCTTTTCTTTCGGCGACGAGCCGCA
GACTAGGCAACCGCTGCCGCCCTAGGTCAGGTGCCCAGGTATCCATCGGACGACCCTTCC
CCGTCGACAGCAAGCACCAGGTATCGGCTGAATCCATATGAAGGAACTGACAGTACAATA
ATTATTTGTTTTCTCTGCAAACTAATTGACCGGGAATCGCTTGGTGTGGGCAATATCAAA
TCAAACTGTGCACTTATGGAGGCTTCAATTCCAAGTTTTGAAAGCATGTACAGCCAATAT
TATGTGGCATGAAAGAGATGGAAACCAGTCAGACGGCCAACTTGGGGATTCATCAGGAGC
TGGGACCAGAGATCAGTCAAAATCCCATGGGAAATCATGTTAACCCAGAAAAGGAAACTA
ATGAAATTCCAGGATCTGAGGTTAACCAAGAGCTTGTGGAAATATGCCAGGGCGCAGTGG
TGGAAACTGATACGATCCAAGAAAATCAAGCTGTTCCAGAGGCAGGCTTAGAGGTTAATG
AAGAGACTGTGGAAACATGCCAGGAAACAGCTGCAGAATCTGATGTTAACCTAGAGAAGC
AAACTTCTGATCCAGGTGTTATTTACCGCTGCAGAAAATGCCGGAGAATGCTTGCAACAC
AAGAATTTGTTGTTACCCATGAAGTAGGTGCAGGTGGCAAAAGCTTCAGAGCAGGCAAAC
GGTCTAATGTGCATGAGGATGATGAGAAACCAGAATGTCCATGCATCTTCGTGGAGCCCA
TGAAGTGGATGCAAACTGTGGAAGAAGGATATGTTGCGAAAAAGCTCTTTTGCATGGGAT
GTAAAGCTCGTCTGGGACAGTTCAATTGGGCTGGTATGCAGTGCAGCTGCGGAGCCTGGG
TGATTCCAGCATTTCAGCTGACCAAAAGTAAGATCGACCAATGCTCAATGTAACACCAGT
GCAATTAGGCGAAGTTTTGACCCCCTTAGCAGTGTCGTTACAACATATATATGTGACTAG
GAAACAGTATCATGTAGACATGTATAGGCACTGTGGTCATTTGGTCTGCTGTTTAGTCTG
CTGCTGCTGATTGGCACGTGGGTTCCACCAAGCTGCAACAACTGATACTAGGAAGCATTA
GGTGGGCTTTCAGTTTGCTGGTTTGTTTTGCCATGCTACTTTAGAGCAACTCTAATAGAT
TAGCTAAAAAGGCTAGTCAAATTTATAGATTTA