Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053395_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:229171812:229174253:-1 gene:Zm00001d053395 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGTGGAGGAGGCGGACCCTTGAGCACACCAGGCCAAACCTTGTGGAGTTCATGCATTCC ACCGGCATTCACATCTCCAACATCGTCCTCAAGAACTCACCCTTCTGGAACATCCATCCT GTTTACTGCGACAACGTGGTCGTAACCAACATGATGATCTTGGCACCACGTGACTCCCCA AACACAGACGGAGTCGATCCAGACTCCAGCTCCAACGTGTGCATCGAGGACTCGTACATA TCCACCGGCGACGACCTGGTGGCCATCAAGAGCGGGTGGGACGAGTACGGGATCGCGTAC GGGCGGCCGAGCGCCGGCGTCACGGTCCGGCGCGTGAGGGGCTCGTCCCCCTTCAGCGGC ATCGCCATCGGCAGCGAGGCCTCCGGCGGGGTGCGCGACGTCCTGGTGGAGGACTGCGCC ATCTTCGACAGCGGCTACGGCATCCACATCAAGACCAACGTCGGCCGGGGCGGCTACATC CGCAACGTCACCGTCGACGGCGTGCGCCTGACCGGCGTGCGCAGCGGCGTCCGCATCGCC GGCGACGTCGGCGACCACCCCGACGCGCACTTCAGCCAGCTCGCCGTGCCCACGGTCGAC GCCGTGCGCATCAGCAACGTGTGGGGCGTCAACGTCCAGCAGCCCGGGTCACTGGAGGGG ATCCGGGCCTCGCCCTTCACCCGCATATGCCTCTCCAACGTCAAGCTCTTCGGGTGGCGG AGCGACGCCGCCTGGAAGTGCAGGGACGTGCGCGGCGCTGCGCTCGGGGTGCAGCCGTCG CCCTGCGCCGAGCTCGCCACCAGCTTCGCGTCCGCACGGTCCTCATGCAGCTAG

Peptide Sequence

PEP ID	Zm00001d053395_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:229171812:229174253:-1 gene:Zm00001d053395 transcript:Zm00001d053395_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	MWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNMMILAPRDSP NTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSPFSG IAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIA GDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLFGWR SDAAWKCRDVRGAALGVQPSPCAELATSFASARSSCS

Transcript Sequence

Transcript ID	Zm00001d053395_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:229171812:229174253:-1 gene:Zm00001d053395 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	AATCCACACGAGATTTGCGACGCTCCGGCCTCCCGGCACGAAGCCTTTCTAGGGATCGCC ACTCGCCACACGCCGGCCGGGGCGAAAAAAGCTCTTCTTGGAGCCCTTCTGCTTGGCCTC TCCCTCTCTTCTCTCCCGGCGTCATTGTCGCCGCTGCCTGCGAGCAACAACAATTATGGC CGCCGCGACGTCGCGCGGGCCAGCGTCGGTCGCCATCTGTGCGCTCGCCGTGCTCCACGC AATGGCTGCCGTCGTACGGCCGGGGCAGGGAGCTGCCGGGACCACGGTACGCCAGCTTCA TCCACGGCGACGGCCTCCGCGACGTCGTCATTACAGGTGACAGGGGAGTCATCGACGGGC AGGGTGAGGTGTGGTGGAACATGTGGAGGAGGCGGACCCTTGAGCACACCAGGCCAAACC TTGTGGAGTTCATGCATTCCACCGGCATTCACATCTCCAACATCGTCCTCAAGAACTCAC CCTTCTGGAACATCCATCCTGTTTACTGCGACAACGTGGTCGTAACCAACATGATGATCT TGGCACCACGTGACTCCCCAAACACAGACGGAGTCGATCCAGACTCCAGCTCCAACGTGT GCATCGAGGACTCGTACATATCCACCGGCGACGACCTGGTGGCCATCAAGAGCGGGTGGG ACGAGTACGGGATCGCGTACGGGCGGCCGAGCGCCGGCGTCACGGTCCGGCGCGTGAGGG GCTCGTCCCCCTTCAGCGGCATCGCCATCGGCAGCGAGGCCTCCGGCGGGGTGCGCGACG TCCTGGTGGAGGACTGCGCCATCTTCGACAGCGGCTACGGCATCCACATCAAGACCAACG TCGGCCGGGGCGGCTACATCCGCAACGTCACCGTCGACGGCGTGCGCCTGACCGGCGTGC GCAGCGGCGTCCGCATCGCCGGCGACGTCGGCGACCACCCCGACGCGCACTTCAGCCAGC TCGCCGTGCCCACGGTCGACGCCGTGCGCATCAGCAACGTGTGGGGCGTCAACGTCCAGC AGCCCGGGTCACTGGAGGGGATCCGGGCCTCGCCCTTCACCCGCATATGCCTCTCCAACG TCAAGCTCTTCGGGTGGCGGAGCGACGCCGCCTGGAAGTGCAGGGACGTGCGCGGCGCTG CGCTCGGGGTGCAGCCGTCGCCCTGCGCCGAGCTCGCCACCAGCTTCGCGTCCGCACGGT CCTCATGCAGCTAGTTAGTGTAGTGATGCCTAGCTAATTAATTTCTGAATTCTGATGATG GGTGTGCTTTTAAGTTTGGGCTTTGTTTTACTTATTCTATG