Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053391_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:228952679:228956244:1 gene:Zm00001d053391 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 24 description:Transcription factor SPEECHLESS
Sequence

ATGGAAGACGGCGGCATGTGCGAGCTCGTGATCGGCGACCACCGCAACCTCCGGCACCGC
CTGTCGGGAGCCGAGGACCTCTTCAGCATCGTCGGGACGTGGGAGGAGCGCACGAACGGC
GCCAGTGGTGGTGGTGGTGGTGGAGGTGGTTCTTCTGCGGCTGCTGTCCGAGCATATAGC
CAGGGCTGCACTGCTGGCACCGCGGGAGCTAAAACGGCGGCTGGGACCAACAACAGCCGG
CGGCGCACGGGCGACGAGGAGAAAGGCGGCAGCGCTCCCGCGCAGAAGAAGCACAAGGGT
TCGTCAGCGGTGTCCGATGACGAGGGAGCGGCGAAGATGTCACACATCACGGTGGAGCGC
AACCGGAGGAAGCAGATGAACGAGCACCTCGCCGTGCTGCGCTCGCTCATGCCCTGCTTC
TACGTCAAAAGGGGTGACCAAGCATCCATCATAGGCGGGGTGGTGGACTACATCAAGGAG
CTTCAGCAGGTGCTGCGTTCGCTGGAGACGAAGAAGCACCGCAAGGCGTACGCGGAGCAG
GTGCTGAGCCCGCGGCCTCTCCCAGCAGTCAAGTCCACGCCGCCGCTCAGCCCGCACGTC
GCGGTGCCCATGAGCCCCCGGACGCCGACCCCGGGCAGCCCGTACAAGCCCGCATCCGGC
GCGGCGGCGACGACGACTGGAAGCTGCAGACTCCCACACCGGGCCGCCGCCGCCGCCGCC
GCCTACATCGGAACGCCGACGACGTCGTCCTCCTCGTCGTCCTACTCGCACGATCAGCAG
CGGCACTACTCGACGTACCTGCCGACCCTAGACAGCCTCGTGACCGAGCTCGCCGCGCAG
GCAGCAGCCTGCAGCAGGCCGGCGGCGTCCGGCGGGCTCACCCGGCTCCCCGACGTGAAG
GTGGAGTTTGCAGGGCCCAACCTCGTGCTGAAGACGGTGTCTCACCGCTCGCCCGGGCAG
GCGCTCAAGATCATCGCAGCGCTCGAGAGCCTCCCGCTGGAGATCCTTCACGTCAGCGTC
AGCACCGTGGACGACACCATGGTGCACTCCTTCACCATCAAGATTGGGATCGAGTGCGAG
CTCAGCGCGGAGGAGCTTGTGCAGGAAATTCAGCAGACGTTATTGTGA

Peptide Sequence

PEP ID

Zm00001d053391_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:228952679:228956244:1 gene:Zm00001d053391 transcript:Zm00001d053391_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 24 description:Transcription factor SPEECHLESS
Sequence

MEDGGMCELVIGDHRNLRHRLSGAEDLFSIVGTWEERTNGASGGGGGGGGSSAAAVRAYS
QGCTAGTAGAKTAAGTNNSRRRTGDEEKGGSAPAQKKHKGSSAVSDDEGAAKMSHITVER
NRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLETKKHRKAYAEQ
VLSPRPLPAVKSTPPLSPHVAVPMSPRTPTPGSPYKPASGAAATTTGSCRLPHRAAAAAA
AYIGTPTTSSSSSSYSHDQQRHYSTYLPTLDSLVTELAAQAAACSRPAASGGLTRLPDVK
VEFAGPNLVLKTVSHRSPGQALKIIAALESLPLEILHVSVSTVDDTMVHSFTIKIGIECE
LSAEELVQEIQQTLL

Transcript Sequence

Transcript ID

Zm00001d053391_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:228952679:228956244:1 gene:Zm00001d053391 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 24 description:Transcription factor SPEECHLESS
Sequence

CAGCAAACGGTCTACTCTTGCCTCTCCTTCTCTCTCTCCTCCGATCCTCTCACTTTTTCG
AGCTTGTGCATAAAAGGAGATCGAGCAAGCAAAATTTTCCTCACTTTTCGCATACTTCCT
CAGCTCCCACCCCTTCTTCTATGATCAGATTCATCAGAGGCTATATTTAGCACACGATTG
AGACAGCAAGTACGTGCATAGGCCGCAGCTACAGCCTGCGTATATTCCTGTGCCAGCCGT
GCACTACGGCACTTTCTTCCCTGCGCGCGGCGGCGGCGGCCACCAATGGAAGACGGCGGC
ATGTGCGAGCTCGTGATCGGCGACCACCGCAACCTCCGGCACCGCCTGTCGGGAGCCGAG
GACCTCTTCAGCATCGTCGGGACGTGGGAGGAGCGCACGAACGGCGCCAGTGGTGGTGGT
GGTGGTGGAGGTGGTTCTTCTGCGGCTGCTGTCCGAGCATATAGCCAGGGCTGCACTGCT
GGCACCGCGGGAGCTAAAACGGCGGCTGGGACCAACAACAGCCGGCGGCGCACGGGCGAC
GAGGAGAAAGGCGGCAGCGCTCCCGCGCAGAAGAAGCACAAGGGTTCGTCAGCGGTGTCC
GATGACGAGGGAGCGGCGAAGATGTCACACATCACGGTGGAGCGCAACCGGAGGAAGCAG
ATGAACGAGCACCTCGCCGTGCTGCGCTCGCTCATGCCCTGCTTCTACGTCAAAAGGGGT
GACCAAGCATCCATCATAGGCGGGGTGGTGGACTACATCAAGGAGCTTCAGCAGGTGCTG
CGTTCGCTGGAGACGAAGAAGCACCGCAAGGCGTACGCGGAGCAGGTGCTGAGCCCGCGG
CCTCTCCCAGCAGTCAAGTCCACGCCGCCGCTCAGCCCGCACGTCGCGGTGCCCATGAGC
CCCCGGACGCCGACCCCGGGCAGCCCGTACAAGCCCGCATCCGGCGCGGCGGCGACGACG
ACTGGAAGCTGCAGACTCCCACACCGGGCCGCCGCCGCCGCCGCCGCCTACATCGGAACG
CCGACGACGTCGTCCTCCTCGTCGTCCTACTCGCACGATCAGCAGCGGCACTACTCGACG
TACCTGCCGACCCTAGACAGCCTCGTGACCGAGCTCGCCGCGCAGGCAGCAGCCTGCAGC
AGGCCGGCGGCGTCCGGCGGGCTCACCCGGCTCCCCGACGTGAAGGTGGAGTTTGCAGGG
CCCAACCTCGTGCTGAAGACGGTGTCTCACCGCTCGCCCGGGCAGGCGCTCAAGATCATC
GCAGCGCTCGAGAGCCTCCCGCTGGAGATCCTTCACGTCAGCGTCAGCACCGTGGACGAC
ACCATGGTGCACTCCTTCACCATCAAGATTGGGATCGAGTGCGAGCTCAGCGCGGAGGAG
CTTGTGCAGGAAATTCAGCAGACGTTATTGTGATAACGTAGGGTTGTTGTTGGCTTATAC
TTGCACTGGCTAGCTACGTACCTGCATGCATGCATGGCTTCCATGCATTATTCACAGTTA
GTAACAAGCAGAGCAGCAGCAGGGTGCAATATAATCTACGTCCGGCTGTACTGTACGTAC
AAGCTGTTGGCTCTCTAGTAGTACGTAGTTAGTTTAGCAGTATGCTAGAGACAGATGGCT
AGCTGTTATGTCTTCATTTTTCACTGCTGATCGAATAATGGATCGCTTTTTCGATCGATC
TTCATCGACCTGTGTGTACGTTCTTTCTTTCTCTTGT