Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053379_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:228494907:228499700:-1 gene:Zm00001d053379 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor 3
Sequence

ATGGATCGCGAGCGCTCCTCACGGCGCCCTCGCGACGACGATGTGCACCACCGGTCTCGC
GAACGGGACGACGACCGACACCGCCGCCGCAGTCGCCACGACACCGACGGTCACCACAGG
TATGAGGGCGGAGACGAGGATCGCCGCCGCCGCCACCGCCACCGCGACAAGGACGGTAGC
GGAGGCGGCGAGGATGACCGCCGTCACCGCAACCATCATGACAATGACGACAGCCGTAGC
CACAGCTACCGCGACGGCGGTGACGACGATCGCCGCCGCGGGAAACGGCGGTCCGTTTCC
CCGTCCGAGTCCCCGCCACCTTCGGTGAAGCGGGATCGCTCGTCTAGCCGCCCGCGGGAG
TCCGTTGAGCGTCGCGACTCCACCGACCGCGAGCCGCGGTCGTCGTCGCGGAAGCGGAAG
GACCACGAGGGCGGTGGCGACGGGGATGAGCCCGTTCGCGAAGGGGGCAAGCGGGCCAGG
GCCTCCGTGGACCTGCCTCCGTCCAAGGAGGAGAGGCCTAGACGGGAGCGCAGGAGGTTT
GAGGATGTCGATGAGAACGGGAAGAATGGTGATATGGGTAAATGGGGCAAGGAAATCTCA
TCTCATGAGCTGCAGAAGGAGGAGTTATCAATTAATGGTGGTTTACAGAGCTACGATGCA
CCTAATGCTGGTTCTCAGCAACCACTCAGTGCTGTTTCTGTGCCATCTTCTGTTCCCATT
CCTTCAAAGGTATCTTCAATTTCTACCAACAATGCAAATGAGGGAGTTAGTATTAGATCT
GATGAGGTTACCGTAAAATCTAGTACAGATGGAAGTGCAATGTCTGCTGCTAGCAAAAGT
AGTAACCTATCTCTTGATGCTTTAGCCAAAGCAAAAAAAGCTTTGCAACTGAAGAAGGAA
CTGTCAGAAAAACTCAAGAAATTACCTATGCTTAATAATAAACTCGCTACAGCTGTTACT
GCTACACAAGTTTCTAAAGAAGCAGCAAAAACTTCTGTATCAGCTGTAGATGCACAACAC
TTTTCTAAAGGAGAAGCAAAACTTACTGATGTTTCTAGTCTGCCAACTAGTAGCATCTCC
GGAACGCCAGCCATTGGTGGTGTGATTGGTATTCCAGGTCTTACACACATACCCAATCTC
GATTCTGTGAAGAGAGCCCAAGAGCTTGCTGCTAAGATGGGGTTCCGCCAAGATCCACAA
TTTGCTCCTGTTATCAACTTCTTCCCTGGTACATCCACTGAAGTTACTGTGGCACAAAGA
CCTGCAAAGGCTCCTGTTCTTCGCCTTGATTCTCATGGTAGGGAAATTGATGAGCAGGGA
AATGTTATCAGCATGACAAAGCCAACGAATCTGAGTACTCTGAAGGTCAATATAAACAAG
CAGAAGAAAGAAGCTTTTCAAATAATCAAGCCGGACTTGGATTCTCTTGCAAAATCAAGT
GTTCATTTTGATGAAAGGATGGGCATAAACCAAAAGAAGCTCCTCCGTCCTAAAAGGCCA
GGATTTCAGTTTGTTGAAGAGGGTAAACTCTCTAGGCAGGCTGAATTGCAAAAAATTAAG
AGTCAATTTGGTGAAGCACAAGCTAAAGAGCTTAAAGTAAAGCAAGCCCAGCTTGCTAAG
GCAAAGGCAGAAGTAGACATTAATCCAAACTTTATTGAGGTTGCTCCTGGTGTGAGAGCT
CCAAAACAAAAGCAGAATGAAGATATCCCTGAAATTGAGCCATGGGATGCAAAAATTTTA
CTTTCTGCCACATATGAGGATATCTCTGTGGAGGAGATTAATATGGACAAGATCACCATA
TATGTTGAACATCCAGAACCATATGATCCACCTGCTGAACCTGCACCACCACCGCCCCAG
CCACTGAAGTTGACTAAGAAGGAGCAGAAGAAGTTGAGAACACAAAGGCGTCTTGCTAAG
GAAAAAGATAGGCAAGAAATGATTAGGCAAGGCCTCTTGGAGCCACCCAAGCCCAAGGTC
AAAATGAGCAATCTTATGAAAGTACTAGGCTCTGAAGCTGTGCAAGATCCCACACGGTTG
GAGATGGAAATAAGAACTGCTGCTGCAGAGCGTGAGCAGGCTCACGTTGACCGTAACATT
GCCCGCAAGCTCACACCATCTGAGCGCCGCGAGAAGAAAGAACGGAAGCTTTTTGATGAT
CCTACTAACACAATAGAGACTATAGTTTGTGTTTACAAGATAAGAGACCTGTCCCATCCA
CAAACACGCTTCAAAGTCGATGTGAATGCTCAAGAGAATAAACTAACAGGTGCTGTGGTC
ATCACTGATAGTATCAGTGTTGTGGTTGTTGAAGGGGGGAAGAAGTCAATCAAAAGATAT
AATAAGCTCATGCTAAACCGTATAGACTGGCCTGCTGCTGTTGGTGGTGATGAAGACACA
GAAATGGAAGCTGACAAGCCAGTGAATAGCTGTGTATTGGTCTGGCAGGGTAGTGTGGCA
AAACCCACCTTCCACAGGTTCACTGTACATAACTGCCGGAGTGAGGCTGCAGCTAAGAAG
GTTTTCGTTGATGTTTCTGTTCCTCACTACTGGGACCTTGCTGTCAATTTCTCAGAAGAT
TCTTCCTGA

Peptide Sequence

PEP ID

Zm00001d053379_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:228494907:228499700:-1 gene:Zm00001d053379 transcript:Zm00001d053379_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor 3
Sequence

MDRERSSRRPRDDDVHHRSRERDDDRHRRRSRHDTDGHHRYEGGDEDRRRRHRHRDKDGS
GGGEDDRRHRNHHDNDDSRSHSYRDGGDDDRRRGKRRSVSPSESPPPSVKRDRSSSRPRE
SVERRDSTDREPRSSSRKRKDHEGGGDGDEPVREGGKRARASVDLPPSKEERPRRERRRF
EDVDENGKNGDMGKWGKEISSHELQKEELSINGGLQSYDAPNAGSQQPLSAVSVPSSVPI
PSKVSSISTNNANEGVSIRSDEVTVKSSTDGSAMSAASKSSNLSLDALAKAKKALQLKKE
LSEKLKKLPMLNNKLATAVTATQVSKEAAKTSVSAVDAQHFSKGEAKLTDVSSLPTSSIS
GTPAIGGVIGIPGLTHIPNLDSVKRAQELAAKMGFRQDPQFAPVINFFPGTSTEVTVAQR
PAKAPVLRLDSHGREIDEQGNVISMTKPTNLSTLKVNINKQKKEAFQIIKPDLDSLAKSS
VHFDERMGINQKKLLRPKRPGFQFVEEGKLSRQAELQKIKSQFGEAQAKELKVKQAQLAK
AKAEVDINPNFIEVAPGVRAPKQKQNEDIPEIEPWDAKILLSATYEDISVEEINMDKITI
YVEHPEPYDPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKV
KMSNLMKVLGSEAVQDPTRLEMEIRTAAAEREQAHVDRNIARKLTPSERREKKERKLFDD
PTNTIETIVCVYKIRDLSHPQTRFKVDVNAQENKLTGAVVITDSISVVVVEGGKKSIKRY
NKLMLNRIDWPAAVGGDEDTEMEADKPVNSCVLVWQGSVAKPTFHRFTVHNCRSEAAAKK
VFVDVSVPHYWDLAVNFSEDSS

Transcript Sequence

Transcript ID

Zm00001d053379_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:228494907:228499700:-1 gene:Zm00001d053379 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor 3
Sequence

ATTCTAAAACAAACACCAATTTCGTCTCTTTCTCCTTTCAGTCCTCGGCGAACTCGACTC
AAACCCTAAGCCCCTCTCCTTGCCATCCCGACCCATGGATCGCGAGCGCTCCTCACGGCG
CCCTCGCGACGACGATGTGCACCACCGGTCTCGCGAACGGGACGACGACCGACACCGCCG
CCGCAGTCGCCACGACACCGACGGTCACCACAGGTATGAGGGCGGAGACGAGGATCGCCG
CCGCCGCCACCGCCACCGCGACAAGGACGGTAGCGGAGGCGGCGAGGATGACCGCCGTCA
CCGCAACCATCATGACAATGACGACAGCCGTAGCCACAGCTACCGCGACGGCGGTGACGA
CGATCGCCGCCGCGGGAAACGGCGGTCCGTTTCCCCGTCCGAGTCCCCGCCACCTTCGGT
GAAGCGGGATCGCTCGTCTAGCCGCCCGCGGGAGTCCGTTGAGCGTCGCGACTCCACCGA
CCGCGAGCCGCGGTCGTCGTCGCGGAAGCGGAAGGACCACGAGGGCGGTGGCGACGGGGA
TGAGCCCGTTCGCGAAGGGGGCAAGCGGGCCAGGGCCTCCGTGGACCTGCCTCCGTCCAA
GGAGGAGAGGCCTAGACGGGAGCGCAGGAGGTTTGAGGATGTCGATGAGAACGGGAAGAA
TGGTGATATGGGTAAATGGGGCAAGGAAATCTCATCTCATGAGCTGCAGAAGGAGGAGTT
ATCAATTAATGGTGGTTTACAGAGCTACGATGCACCTAATGCTGGTTCTCAGCAACCACT
CAGTGCTGTTTCTGTGCCATCTTCTGTTCCCATTCCTTCAAAGGTATCTTCAATTTCTAC
CAACAATGCAAATGAGGGAGTTAGTATTAGATCTGATGAGGTTACCGTAAAATCTAGTAC
AGATGGAAGTGCAATGTCTGCTGCTAGCAAAAGTAGTAACCTATCTCTTGATGCTTTAGC
CAAAGCAAAAAAAGCTTTGCAACTGAAGAAGGAACTGTCAGAAAAACTCAAGAAATTACC
TATGCTTAATAATAAACTCGCTACAGCTGTTACTGCTACACAAGTTTCTAAAGAAGCAGC
AAAAACTTCTGTATCAGCTGTAGATGCACAACACTTTTCTAAAGGAGAAGCAAAACTTAC
TGATGTTTCTAGTCTGCCAACTAGTAGCATCTCCGGAACGCCAGCCATTGGTGGTGTGAT
TGGTATTCCAGGTCTTACACACATACCCAATCTCGATTCTGTGAAGAGAGCCCAAGAGCT
TGCTGCTAAGATGGGGTTCCGCCAAGATCCACAATTTGCTCCTGTTATCAACTTCTTCCC
TGGTACATCCACTGAAGTTACTGTGGCACAAAGACCTGCAAAGGCTCCTGTTCTTCGCCT
TGATTCTCATGGTAGGGAAATTGATGAGCAGGGAAATGTTATCAGCATGACAAAGCCAAC
GAATCTGAGTACTCTGAAGGTCAATATAAACAAGCAGAAGAAAGAAGCTTTTCAAATAAT
CAAGCCGGACTTGGATTCTCTTGCAAAATCAAGTGTTCATTTTGATGAAAGGATGGGCAT
AAACCAAAAGAAGCTCCTCCGTCCTAAAAGGCCAGGATTTCAGTTTGTTGAAGAGGGTAA
ACTCTCTAGGCAGGCTGAATTGCAAAAAATTAAGAGTCAATTTGGTGAAGCACAAGCTAA
AGAGCTTAAAGTAAAGCAAGCCCAGCTTGCTAAGGCAAAGGCAGAAGTAGACATTAATCC
AAACTTTATTGAGGTTGCTCCTGGTGTGAGAGCTCCAAAACAAAAGCAGAATGAAGATAT
CCCTGAAATTGAGCCATGGGATGCAAAAATTTTACTTTCTGCCACATATGAGGATATCTC
TGTGGAGGAGATTAATATGGACAAGATCACCATATATGTTGAACATCCAGAACCATATGA
TCCACCTGCTGAACCTGCACCACCACCGCCCCAGCCACTGAAGTTGACTAAGAAGGAGCA
GAAGAAGTTGAGAACACAAAGGCGTCTTGCTAAGGAAAAAGATAGGCAAGAAATGATTAG
GCAAGGCCTCTTGGAGCCACCCAAGCCCAAGGTCAAAATGAGCAATCTTATGAAAGTACT
AGGCTCTGAAGCTGTGCAAGATCCCACACGGTTGGAGATGGAAATAAGAACTGCTGCTGC
AGAGCGTGAGCAGGCTCACGTTGACCGTAACATTGCCCGCAAGCTCACACCATCTGAGCG
CCGCGAGAAGAAAGAACGGAAGCTTTTTGATGATCCTACTAACACAATAGAGACTATAGT
TTGTGTTTACAAGATAAGAGACCTGTCCCATCCACAAACACGCTTCAAAGTCGATGTGAA
TGCTCAAGAGAATAAACTAACAGGTGCTGTGGTCATCACTGATAGTATCAGTGTTGTGGT
TGTTGAAGGGGGGAAGAAGTCAATCAAAAGATATAATAAGCTCATGCTAAACCGTATAGA
CTGGCCTGCTGCTGTTGGTGGTGATGAAGACACAGAAATGGAAGCTGACAAGCCAGTGAA
TAGCTGTGTATTGGTCTGGCAGGGTAGTGTGGCAAAACCCACCTTCCACAGGTTCACTGT
ACATAACTGCCGGAGTGAGGCTGCAGCTAAGAAGGTTTTCGTTGATGTTTCTGTTCCTCA
CTACTGGGACCTTGCTGTCAATTTCTCAGAAGATTCTTCCTGAGCAAAGCACCTGTTCAG
AACCTTGGTAGCTTCTGCTGACCTTTGCTGGCTACATGCTAGAGATGTGTGGCCAGTGTT
ATAGCACTTGTCATGATGGTAAGTCCTGTTATCACGAGTTTCTACACCAATGGGCACATC
TGCTGAACCGAGGAATGCCTGCTGTTGGCCTGTTGTCAATCTGTTGTGAAGATGTCATTT
CAGTGATGTTTATTGCTGGATTTTCCTATGGTCTAGAAATGTGTTGTGAGCAACTGTTGA
ATTTTGCAGCGTACATTTGGAATAAATCCATTGCAACAAATGTCTATGCGTGTTTTAGTA
TTGTTGCGGAGCGAATTGTTGTGAAACAAGTGTCTTCTTAAATAGATACCCCTTCGTGTG
TGTGCGCGTGAGTGGCATTATGAAGACTATAATAGCCACTAGTAAATGTTTTAGGTGGTT
ACCGTAGCCACTAAAAGTGCAATTTCTATGATCAGACATAATTCTTTATTTCTATTATTC
TATTTATATTT