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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053373_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:228158599:228159210:-1 gene:Zm00001d053373 gene_biotype:protein_coding transcript_biotype:protein_coding description:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Sequence

ATGGGCAGCAACGCCGTTGTCAACTTCCCATTTCTGCGCCTCCGCTGCGTGCTCATCTCA
TGCGGCATTATCAGCATCCTCATCGGCGCTGCCTCGCTAGCTGTGACGCTGACCGTCTAC
CGCGTCCGCGAGCCCGTGATGAAGATGAACGCCATCTGTGTCAAGGACCCCGGCGCCACC
GTCGCGTCATCTTCGGCCTCCTCGACGCCACTCCTGTCGCTGACGGTGGTGGCGGACGTG
TCGGTGAAGAACCCGAACGCCGCATCGCTGCGGTACGGTGCGACGGAGACGTCGGTCTAC
TACCGCGCGCGTCAGGTCGGGGAGGCCCTGGGCCCTCCTGGCACGGCCCCGGCGCGGCGG
ACCGTGCGGCTGAACGTGACGGTGGACGTCGCCGTGGGCGCACTCCTGGGGGACCCGGCG
TTCCTGGAGGACGTCGTGGCGGCAGGCGCCGTCGTCGTGGCCACTGCCACGCGTGTGCGC
GGGCGCGTCGCCGTGCTGGGCGGATTGGTGCACCGGCGCGTGGTGCTGGAGATAAACTGC
ACGGCCACAGTCGCCGTGGCCGACATGTCCATCAGCGATCAGAGGTGCCTGCAACACGTC
TGGTTGCCTTAA

Peptide Sequence

PEP ID

Zm00001d053373_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:228158599:228159210:-1 gene:Zm00001d053373 transcript:Zm00001d053373_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Sequence

MGSNAVVNFPFLRLRCVLISCGIISILIGAASLAVTLTVYRVREPVMKMNAICVKDPGAT
VASSSASSTPLLSLTVVADVSVKNPNAASLRYGATETSVYYRARQVGEALGPPGTAPARR
TVRLNVTVDVAVGALLGDPAFLEDVVAAGAVVVATATRVRGRVAVLGGLVHRRVVLEINC
TATVAVADMSISDQRCLQHVWLP

Transcript Sequence

Transcript ID

Zm00001d053373_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:228158599:228159210:-1 gene:Zm00001d053373 gene_biotype:protein_coding transcript_biotype:protein_coding description:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Sequence

ATGGGCAGCAACGCCGTTGTCAACTTCCCATTTCTGCGCCTCCGCTGCGTGCTCATCTCA
TGCGGCATTATCAGCATCCTCATCGGCGCTGCCTCGCTAGCTGTGACGCTGACCGTCTAC
CGCGTCCGCGAGCCCGTGATGAAGATGAACGCCATCTGTGTCAAGGACCCCGGCGCCACC
GTCGCGTCATCTTCGGCCTCCTCGACGCCACTCCTGTCGCTGACGGTGGTGGCGGACGTG
TCGGTGAAGAACCCGAACGCCGCATCGCTGCGGTACGGTGCGACGGAGACGTCGGTCTAC
TACCGCGCGCGTCAGGTCGGGGAGGCCCTGGGCCCTCCTGGCACGGCCCCGGCGCGGCGG
ACCGTGCGGCTGAACGTGACGGTGGACGTCGCCGTGGGCGCACTCCTGGGGGACCCGGCG
TTCCTGGAGGACGTCGTGGCGGCAGGCGCCGTCGTCGTGGCCACTGCCACGCGTGTGCGC
GGGCGCGTCGCCGTGCTGGGCGGATTGGTGCACCGGCGCGTGGTGCTGGAGATAAACTGC
ACGGCCACAGTCGCCGTGGCCGACATGTCCATCAGCGATCAGAGGTGCCTGCAACACGTC
TGGTTGCCTTAA