Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053371_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:227975997:227984197:-1 gene:Zm00001d053371 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting 29

Sequence

ATGGTGCTTGTGCTTGCGCTGGGGGATCTGCACATCCCGCACCGGGCGCCCGACCTCCCC
GCCAAATTCAAGTCCATGCTCGTGCCCGGCAAGATCCAACACATCATCTGCACTGGCAAT
CTCTGCATCAAGGAAGTCCATGACTACCTGAAAAGCCTTTGCCCTGATCTCCATATTACC
AGAGGTGAACATGATGAGGATGCTCGATACCCAGAGACTAAGACACTTACAATTGGTCAG
TTTAAGCTTGGGCTGTGCCATGGCCATCAGGTTGTTCCATGGGGCGACCTGGACTCCCTG
GCGATGCTCCAGCGGCAGCTGGACGTGGACATCCTGGTGACCGGGCACACGCACCAGTTC
AAGGCATATAAGCACGAGGGAGGCGTGGTGATCAACCCTGGCTCTGCCACGGGCGCCTAC
AGCAGCATCACTTACGACGTGAACCCAAGCTTTGTGCTGATGGACATCGACGGGCTCCGT
GTGGTGGTGTACGTCTACGAGCTGATTGACGGCGAGGTGAAGGTGGACAAAATCGACTTC
AAGAAGACTGCGACGATGCACGGCTAG

Peptide Sequence

PEP ID

Zm00001d053371_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:227975997:227984197:-1 gene:Zm00001d053371 transcript:Zm00001d053371_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting 29

Sequence

MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHIT
RGEHDEDARYPETKTLTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQF
KAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDF
KKTATMHG

Transcript Sequence

Transcript ID

Zm00001d053371_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:227975997:227984197:-1 gene:Zm00001d053371 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting 29

Sequence

GGCGAAACCGATGGAGCCTCAAACGGGCCGTATCCGTCGTGCACAGCATGCTAAAGCCCA
GTGCTGACGACGACGAACAACACTCATCCGGCCCGGTCATGAGCCCAATGCGGGGCCACT
TCGTCGTTTTTGACAAGTAGACCCACAGTGGCCCCACGTGCTTGCCCCTCCCTTTCTCTT
CTCCCCTTGTGTCGCGCTCGCGCATCTGAAGCAAGGGGGGGAAGGGCCAAGGGGGATCGG
TCTTGTTCTCGGAGAGGGTTGAGCTGCTTGACGGTTTTGACTCGGATCATGGTGTGCAGC
TCTATCAGATAGAGAGCTGACGTGAGGTGTGAGACGCGGATCGTGGAGTACTACTCAGTA
GGAGATCAAGAGGAAGGAGGTGGGGAGGGGGAAGAAGGCGATAGCCGGGGAGGATGGTGC
TTGTGCTTGCGCTGGGGGATCTGCACATCCCGCACCGGGCGCCCGACCTCCCCGCCAAAT
TCAAGTCCATGCTCGTGCCCGGCAAGATCCAACACATCATCTGCACTGGCAATCTCTGCA
TCAAGGAAGTCCATGACTACCTGAAAAGCCTTTGCCCTGATCTCCATATTACCAGAGGTG
AACATGATGAGGATGCTCGATACCCAGAGACTAAGACACTTACAATTGGTCAGTTTAAGC
TTGGGCTGTGCCATGGCCATCAGGTTGTTCCATGGGGCGACCTGGACTCCCTGGCGATGC
TCCAGCGGCAGCTGGACGTGGACATCCTGGTGACCGGGCACACGCACCAGTTCAAGGCAT
ATAAGCACGAGGGAGGCGTGGTGATCAACCCTGGCTCTGCCACGGGCGCCTACAGCAGCA
TCACTTACGACGTGAACCCAAGCTTTGTGCTGATGGACATCGACGGGCTCCGTGTGGTGG
TGTACGTCTACGAGCTGATTGACGGCGAGGTGAAGGTGGACAAAATCGACTTCAAGAAGA
CTGCGACGATGCACGGCTAGCCCTATCCTTCCACTCCGTGATTGAGTGCAAGACATGTCT
AGCTTCTGTTTCTTTTCTTTCAGCTTCTTGATTCAGAGCCTCCTGAACACGCTTTCTACC
TGTTCATGCGCAAAGAACTTTTTAGGTCTGGTTGTTAACAATGTTTCTCGGAGCCATGAA
TTTAAATACTATACTTTTTAATTGTCATGATAATAACATAACTTTGGCTAGCTTAAAACA
CCGGCTATTGTTTAGATAAAGTATTGTAAATGATGACATTTGGGCATAAGTTAATCATAC
TATGAAAAATTTGGGTTGGAGTGAAATTTTCATATATAATCAAGGAAAG