Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053356_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:227420839:227426696:-1 gene:Zm00001d053356 gene_biotype:protein_coding transcript_biotype:protein_coding description:intracellular protein transport protein USO1-related
Sequence	ATGGAGGACGACGGAGTCCGGGAGGGGCCGTCCGCGCTTGCGCCTGCGGCCGCTTCCGCC GCGGCGAGGAGGAGCTCGGCCTCGGCGCGCCAGCTCGGCGCCAGTCTCTGGGAGATCCAC GACGTGGCGCGGGAGGTACGCCGGAGCAGGCGACGGGGTGGGAGGGCCATCGCCGCCGGT CGGGAGCACGGCGGCGGCGGAGAACTGGACCAGCCACAGAGTTCAGGTGGCATTCGTAGG CATGTTGCAGACTCGTCGATGAAACATCATAAGTTCGATCAAGAAAGAAGCCATAGAATA CAACCTTTTTCTCCTGCAAGTTATACAAGCTCAGTTGGGGATTCCAATGTGAATCTAACT AGAAGTCCGACTCGTTCTTTGGGCATCATGGGTAGATCTATGGGGGAAGGCTATAGCCTT AAAACATCAACAGAACTATTGAAGGTTCTAAATCGAATTTGGAGTCTTGAAGAACAGCAC ACTGCTAACTTGTCAGTGGTTAATGGATTGAAACTGGAGTTACAGCAGGCTCAGACACAT ATTCAAGAACTCCTGCAAGAGAGACGGCAGTACAGACACGAAGTTTCATCACTGATGCGA CAACTCTCTGAAAACAAACTTGTTAGAAAAAACAAGGATCACATGAAGGTTGACACAGCT GTGCGTTCCCTGCAAGGTGAACTAGAGGATGAGAAGCGTCTGAGGAGGCATTCTGAGGAC CTACTCAGGAAGTTGGGCATGGAGTTGTCTGAAATAAAGTCAGCGTTTCTCAAGTCAGTC AAGGACCTTGAGAAGGAGAAGAAAGGAAATCGCCTCTTAGAAGATCTTTGTGACCAGTTT GCAATGGGCATCAGGAATTACGAAGAGGAACTCAGAGTGGTAAAGCAAAGAAATGTCAAG AATTATGAGCTCAAATTTGATAATTCGGTGCTCCATATGTCAGAACTATGGCTTGATGAA CGAATGCAAATGCAAAATACAGATGTCAATGGGGAATTGGCTCATAAAACCACAATAACA GAAAGGCTCAGCGGTGAAATACAGGCCTTTCTTCTTTCTAAAAAAGCAGGTAGCTCTATG AATAATGAAAAACATATGAATGATAATACTAGATTACGACGTCAATCACTTGAGTCTGTC CATTTGAATGGAGCCACCAGTGCTCCCCAGTTTGCTGAAGATGATGACGACTCTATTGCT AGTGATTTGAATTGCTTTGAACTGAATATGCACGGGCATATGGGATCCCGCAGAAGTGGC ACAGGAGCCATGAATGTGCATAAAAGAAGATCAGAGCATCCTCATGTTATATCTGCTGAA GGTTTATGCATGTCCAGTGTGCCAGTTTATTTACAGAAAGGCATTGCAAGGCCCAGTAGC AGCAAATTGCAGCCTGCCAGTAAAATACCAGAAATCAGCTCACAAAGCAATGCCAGAATC ACTCCAGCAGAAGAGCAGAATGGAAGCACAGGCACCCAAATTATTCAAGGGTCCAACAAT GGGTCAACGATGAACAACCCAGATGCACATCATGTTGATTACCTGGGGCAGGAATCCTTT GATCATTTCTCCCGAACAAGTCTCTTTTGTGAAGGCACTACTTCGGGGGATCTGGGTAAT GTCGGGAGCCCCACGCGGCAACTGAAATACCAATCCACATCTTTGGACCCCGAGATAACG GAATGCTCACCTGAACAGCCAGTAGGTGTGATGGAGAACACCCTGAAGGCAAAATTACTT CAAGCAAGGCTAGAGGGGCGACATGCCCGATTAAAGGCATCAGGTGGCTCCTCAACTAGT AGGAGAAAGTGA

Peptide Sequence

PEP ID	Zm00001d053356_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:227420839:227426696:-1 gene:Zm00001d053356 transcript:Zm00001d053356_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:intracellular protein transport protein USO1-related
Sequence	MEDDGVREGPSALAPAAASAAARRSSASARQLGASLWEIHDVAREVRRSRRRGGRAIAAG REHGGGGELDQPQSSGGIRRHVADSSMKHHKFDQERSHRIQPFSPASYTSSVGDSNVNLT RSPTRSLGIMGRSMGEGYSLKTSTELLKVLNRIWSLEEQHTANLSVVNGLKLELQQAQTH IQELLQERRQYRHEVSSLMRQLSENKLVRKNKDHMKVDTAVRSLQGELEDEKRLRRHSED LLRKLGMELSEIKSAFLKSVKDLEKEKKGNRLLEDLCDQFAMGIRNYEEELRVVKQRNVK NYELKFDNSVLHMSELWLDERMQMQNTDVNGELAHKTTITERLSGEIQAFLLSKKAGSSM NNEKHMNDNTRLRRQSLESVHLNGATSAPQFAEDDDDSIASDLNCFELNMHGHMGSRRSG TGAMNVHKRRSEHPHVISAEGLCMSSVPVYLQKGIARPSSSKLQPASKIPEISSQSNARI TPAEEQNGSTGTQIIQGSNNGSTMNNPDAHHVDYLGQESFDHFSRTSLFCEGTTSGDLGN VGSPTRQLKYQSTSLDPEITECSPEQPVGVMENTLKAKLLQARLEGRHARLKASGGSSTS RRK

Transcript Sequence

Transcript ID	Zm00001d053356_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:227420839:227426696:-1 gene:Zm00001d053356 gene_biotype:protein_coding transcript_biotype:protein_coding description:intracellular protein transport protein USO1-related
Sequence	AGACGGGGCCCGAGGGCTCCGTGAAGGCGAGCCGCGGGGGGCGGGAGGTGCCGCTGCGGC TGCGCCTCGGGAGGGCCCGTCGGCGGGCGGGACCTGTCACACCGACGCCGTCGTGGAAGA TGGAGGACGACGGAGTCCGGGAGGGGCCGTCCGCGCTTGCGCCTGCGGCCGCTTCCGCCG CGGCGAGGAGGAGCTCGGCCTCGGCGCGCCAGCTCGGCGCCAGTCTCTGGGAGATCCACG ACGTGGCGCGGGAGGTACGCCGGAGCAGGCGACGGGGTGGGAGGGCCATCGCCGCCGGTC GGGAGCACGGCGGCGGCGGAGAACTGGACCAGCCACAGAGTTCAGGTGGCATTCGTAGGC ATGTTGCAGACTCGTCGATGAAACATCATAAGTTCGATCAAGAAAGAAGCCATAGAATAC AACCTTTTTCTCCTGCAAGTTATACAAGCTCAGTTGGGGATTCCAATGTGAATCTAACTA GAAGTCCGACTCGTTCTTTGGGCATCATGGGTAGATCTATGGGGGAAGGCTATAGCCTTA AAACATCAACAGAACTATTGAAGGTTCTAAATCGAATTTGGAGTCTTGAAGAACAGCACA CTGCTAACTTGTCAGTGGTTAATGGATTGAAACTGGAGTTACAGCAGGCTCAGACACATA TTCAAGAACTCCTGCAAGAGAGACGGCAGTACAGACACGAAGTTTCATCACTGATGCGAC AACTCTCTGAAAACAAACTTGTTAGAAAAAACAAGGATCACATGAAGGTTGACACAGCTG TGCGTTCCCTGCAAGGTGAACTAGAGGATGAGAAGCGTCTGAGGAGGCATTCTGAGGACC TACTCAGGAAGTTGGGCATGGAGTTGTCTGAAATAAAGTCAGCGTTTCTCAAGTCAGTCA AGGACCTTGAGAAGGAGAAGAAAGGAAATCGCCTCTTAGAAGATCTTTGTGACCAGTTTG CAATGGGCATCAGGAATTACGAAGAGGAACTCAGAGTGGTAAAGCAAAGAAATGTCAAGA ATTATGAGCTCAAATTTGATAATTCGGTGCTCCATATGTCAGAACTATGGCTTGATGAAC GAATGCAAATGCAAAATACAGATGTCAATGGGGAATTGGCTCATAAAACCACAATAACAG AAAGGCTCAGCGGTGAAATACAGGCCTTTCTTCTTTCTAAAAAAGCAGGTAGCTCTATGA ATAATGAAAAACATATGAATGATAATACTAGATTACGACGTCAATCACTTGAGTCTGTCC ATTTGAATGGAGCCACCAGTGCTCCCCAGTTTGCTGAAGATGATGACGACTCTATTGCTA GTGATTTGAATTGCTTTGAACTGAATATGCACGGGCATATGGGATCCCGCAGAAGTGGCA CAGGAGCCATGAATGTGCATAAAAGAAGATCAGAGCATCCTCATGTTATATCTGCTGAAG GTTTATGCATGTCCAGTGTGCCAGTTTATTTACAGAAAGGCATTGCAAGGCCCAGTAGCA GCAAATTGCAGCCTGCCAGTAAAATACCAGAAATCAGCTCACAAAGCAATGCCAGAATCA CTCCAGCAGAAGAGCAGAATGGAAGCACAGGCACCCAAATTATTCAAGGGTCCAACAATG GGTCAACGATGAACAACCCAGATGCACATCATGTTGATTACCTGGGGCAGGAATCCTTTG ATCATTTCTCCCGAACAAGTCTCTTTTGTGAAGGCACTACTTCGGGGGATCTGGGTAATG TCGGGAGCCCCACGCGGCAACTGAAATACCAATCCACATCTTTGGACCCCGAGATAACGG AATGCTCACCTGAACAGCCAGTAGGTGTGATGGAGAACACCCTGAAGGCAAAATTACTTC AAGCAAGGCTAGAGGGGCGACATGCCCGATTAAAGGCATCAGGTGGCTCCTCAACTAGTA GGAGAAAGTGAGAGTGCTGCAGATTCCGGGGTTTGACTGTTTGAAGCCCACACGAAGAAA TCAAAGGTGTAATATAGCTGACTTATCTATGGAACTTCCTTTGGCCGTATCAATTGGTTC AGTATCTGTGTACATGGACTTTGTGCCATCTGAATACATGAATCCTATTTTCATATGTGA ATCATCTTCCATGTCAATTATGCTGTTAGTTAGATGCCAGCACTCTTTAGGCTAATAGTT CAGACTCAGAAGGATTTTGGTTATGGCACCTCGTATCTTGCTACCTCCGTGATACTTCAC TTAGGATGTTTTCAGTGGGTCGTGTAAAATAGGAGATTTGTGAAGGACTAGTGAGGCGAC CAGAGGGTTGTGAATGAGAGCCACAAAAAATTCTC