Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053296_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:224801163:224804512:1 gene:Zm00001d053296 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-conjugating enzyme E2 variant 1C
Sequence

ATGACGCTGGGTAGCTCCGGCGCCGGATCGAGCGTCGTCGTTCCTCGAAACTTCAGGCTA
TTAGAGGAGCTCGAGCGTGGAGAGAAGGGCATTGGTGATGGGACAGTGAGCTATGGAATG
GATGATGCTGATGACATCTACATGCGGTCATGGACTGGTACCATCATTGGCCCTCACAAT
ACTGTACATGAGGGTCGCATCTACCAGCTGAAGTTGTTTTGTGACAAAGACTATCCGGAG
AAGCCACCATCTGTCAGATTCCACTCAAGAATCAACATGACATGCGTTAATCACGAGACA
GGAATGGTTGATCCAAGGAAGTTTGGTTTGCTAGCGAACTGGCAGCGGGACTACACGATG
GAGAACATCCTAACCCAGCTCAAGAAAGAGATGGCTGCCTCGCAGAATCGAAAGTTAGTG
CAGCCTCCAGAAGGGACATTCTTCTAA

Peptide Sequence

PEP ID

Zm00001d053296_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:224801163:224804512:1 gene:Zm00001d053296 transcript:Zm00001d053296_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-conjugating enzyme E2 variant 1C
Sequence

MTLGSSGAGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPHN
TVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGMVDPRKFGLLANWQRDYTM
ENILTQLKKEMAASQNRKLVQPPEGTFF

Transcript Sequence

Transcript ID

Zm00001d053296_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:224801163:224804512:1 gene:Zm00001d053296 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin-conjugating enzyme E2 variant 1C
Sequence

ACTGATTGCTGCTCGACGGTCTCCCGTGATCTGATAATAACAAAACCTGTAGGCTGTAGC
CCAACGAGAGGAATCAAATTGGACAACCCTGTCGCCCTCTCGGTCTCCCTCGAGCTTTTC
TTGTGCGCAGCCGCAGCCGCTGCTTTTCGTTCGTCTTCATCCTACGCGAGGGCGAAACCC
ACAAACCCTCTCCCTCCTGTACTCCGGCCGACACATCCAGGGGCGATGACGCTGGGTAGC
TCCGGCGCCGGATCGAGCGTCGTCGTTCCTCGAAACTTCAGGCTATTAGAGGAGCTCGAG
CGTGGAGAGAAGGGCATTGGTGATGGGACAGTGAGCTATGGAATGGATGATGCTGATGAC
ATCTACATGCGGTCATGGACTGGTACCATCATTGGCCCTCACAATACTGTACATGAGGGT
CGCATCTACCAGCTGAAGTTGTTTTGTGACAAAGACTATCCGGAGAAGCCACCATCTGTC
AGATTCCACTCAAGAATCAACATGACATGCGTTAATCACGAGACAGGAATGGTTGATCCA
AGGAAGTTTGGTTTGCTAGCGAACTGGCAGCGGGACTACACGATGGAGAACATCCTAACC
CAGCTCAAGAAAGAGATGGCTGCCTCGCAGAATCGAAAGTTAGTGCAGCCTCCAGAAGGG
ACATTCTTCTAACGAAGTGTTCACTTGGCCCGTCATGGGATCCAACAGTAATTGAAACTT
TTATGGGCTAAAAAACAGCGTCTACATCTGGTGCCCCTGCCTGTCTTTGTGATTTTTTAT
GACTTTTATGTTCTTGTATCGTGAACCGCAGTGAACAACGGTTGTTGCAAGTTCCAGGGA
TATCTTTGGAAGTGGTAAACAAATGCGTCTTATTTCTATGTAATATTAGACCCCGTGCGT
GTGTGGTTTCAAGGTACAGCTCCCTCTCAACTGTTGCCGTGCATTCCGTCGATTTGCTTG
ACGTCTTTCGTCCACA