Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053268_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:223286478:223317315:-1 gene:Zm00001d053268 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MICRORCHIDIA 7
Sequence	ATGCTTGTACATAACCCTTTGCAGATTGACTATGAAAAAGAGAATGAATGGAAAAGGAAG GCACGGACAACATTGACTGATTGGTGTATGAGCTTAGAAACAATAATACAATGGTCTCCT TATTCCACAGAAGCAGAACTTATTCAGGAGTTTGGCTCAATAGGGGAACAAGGAACTCGA ATTATCATATACAATCTGTGGGAGGATGATGAAGGAGAGCTGGAGCTTGATTTTGATGCT GACGCAAATGATATTCAGATTAGAGGTGTTAACAGAGATCAGAACAAGATCAAGAAGGCA AATCAGTTTCCAAACTCCAAACACTTCTTTACTTATAGACATTCTCTAAGGAGTTATGCA TCAATTTTATATCTTATGCTCCCGGATAACTTCCAAATGATTTTACGGGGAAAAAAGATT GACCACCATAACATTATCAATGATCTCATGCTAAAGAAGCAACTTACTTATAATCCAACA GTGGGCGATGGACTTCCAAAGGATATGCATGTGGCAGCTAAGGTGACAATTGGTTTTGTT AAGGATGCGAGACAACATATTGATATTCAAGGGTTTAATGTTTACCACAAGAATCGCCTA ATAAAGCCTTTTTGGAGAGTATGGACTTCTGCTGGAGTTGCTGGCCGTGGTATCATAGGT ATGAAATCTTGTTGCTTTTTTTTTCTTTTTAGGCTATCTTCCGTTTTCGAAAAAAACAAA GACTTGTTGGATGAAGTCAGTTTTCCCTCAATTGGGACATATAGCTCAGCTGATAATAAT CTGCATGCAGGACTGTCGTTGCGTCCATTTGGCCAAGGTTCCTGGAAGTCAGGGTATCTG CAAACGATCAGAAGTGATGGCAGATCATGTTCTAATACAACAAATAATATTATGAATGCA AGCATGTCATCCCCAGAAACTTCCAAGCTTAGTGGTCCCAATAGAGAGTTCTCTTCAACA ACAGTGTGCCAGCACAGAGCTGAAAAGTCTGCAAATACCATAAGATCTGAAAGATCAGTT TTGCATGGCTTGTCAAATACAGATGGTGGAAAGACTGAGACTGCCAACGCCCCATCCAAA TCAACTTCCCCTATCCTAAGGACTAGTTTGCCACCAACTCCCAATGAAGGAAAACGAAGT GAGAGGATTGCTGCCAAATACCAATCGAAGCAAGTAAATGCAACAACTAATGGAGACAGG GAATCCATTGTTGACCCTGAAGCTATCATCAAGAAGTTGAAGGAAGAAAATTCATCGCTA AAGGAGAGAATCTTGATGGTGCAGGAATCATTATCAAGGGAACTGCAAATCGAGCGGGAT AAGAACAAGTCTCTGACCGAGAGGTTTGAGGATGTGGAGAGGCAACTCGAGTTGGCAATT AAAGAGCAAGAAGCAACGGTAGAACTCTTTGCAGAAGAAAGGAAGTGCCACGACCAAGAG GTGGAAAACCTGAAGCGGAAGCTCACGGTTAGAGGCCTCTTCCACCATTCAGGATCTGAT GGAGCAGCTCAATGCTGCCCGGAACTGCTGCAAGAGATGAAGCAGCAGACGAAGCAACTT CACCCCCCAGTAATACGTTAG

Peptide Sequence

PEP ID	Zm00001d053268_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:223286478:223317315:-1 gene:Zm00001d053268 transcript:Zm00001d053268_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MICRORCHIDIA 7
Sequence	MLVHNPLQIDYEKENEWKRKARTTLTDWCMSLETIIQWSPYSTEAELIQEFGSIGEQGTR IIIYNLWEDDEGELELDFDADANDIQIRGVNRDQNKIKKANQFPNSKHFFTYRHSLRSYA SILYLMLPDNFQMILRGKKIDHHNIINDLMLKKQLTYNPTVGDGLPKDMHVAAKVTIGFV KDARQHIDIQGFNVYHKNRLIKPFWRVWTSAGVAGRGIIGMKSCCFFFLFRLSSVFEKNK DLLDEVSFPSIGTYSSADNNLHAGLSLRPFGQGSWKSGYLQTIRSDGRSCSNTTNNIMNA SMSSPETSKLSGPNREFSSTTVCQHRAEKSANTIRSERSVLHGLSNTDGGKTETANAPSK STSPILRTSLPPTPNEGKRSERIAAKYQSKQVNATTNGDRESIVDPEAIIKKLKEENSSL KERILMVQESLSRELQIERDKNKSLTERFEDVERQLELAIKEQEATVELFAEERKCHDQE VENLKRKLTVRGLFHHSGSDGAAQCCPELLQEMKQQTKQLHPPVIR

Transcript Sequence

Transcript ID	Zm00001d053268_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:223286478:223317315:-1 gene:Zm00001d053268 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MICRORCHIDIA 7
Sequence	ATGCTTGTACATAACCCTTTGCAGATTGACTATGAAAAAGAGAATGAATGGAAAAGGAAG GCACGGACAACATTGACTGATTGGTGTATGAGCTTAGAAACAATAATACAATGGTCTCCT TATTCCACAGAAGCAGAACTTATTCAGGAGTTTGGCTCAATAGGGGAACAAGGAACTCGA ATTATCATATACAATCTGTGGGAGGATGATGAAGGAGAGCTGGAGCTTGATTTTGATGCT GACGCAAATGATATTCAGATTAGAGGTGTTAACAGAGATCAGAACAAGATCAAGAAGGCA AATCAGTTTCCAAACTCCAAACACTTCTTTACTTATAGACATTCTCTAAGGAGTTATGCA TCAATTTTATATCTTATGCTCCCGGATAACTTCCAAATGATTTTACGGGGAAAAAAGATT GACCACCATAACATTATCAATGATCTCATGCTAAAGAAGCAACTTACTTATAATCCAACA GTGGGCGATGGACTTCCAAAGGATATGCATGTGGCAGCTAAGGTGACAATTGGTTTTGTT AAGGATGCGAGACAACATATTGATATTCAAGGGTTTAATGTTTACCACAAGAATCGCCTA ATAAAGCCTTTTTGGAGAGTATGGACTTCTGCTGGAGTTGCTGGCCGTGGTATCATAGGT ATGAAATCTTGTTGCTTTTTTTTTCTTTTTAGGCTATCTTCCGTTTTCGAAAAAAACAAA GACTTGTTGGATGAAGTCAGTTTTCCCTCAATTGGGACATATAGCTCAGCTGATAATAAT CTGCATGCAGGACTGTCGTTGCGTCCATTTGGCCAAGGTTCCTGGAAGTCAGGGTATCTG CAAACGATCAGAAGTGATGGCAGATCATGTTCTAATACAACAAATAATATTATGAATGCA AGCATGTCATCCCCAGAAACTTCCAAGCTTAGTGGTCCCAATAGAGAGTTCTCTTCAACA ACAGTGTGCCAGCACAGAGCTGAAAAGTCTGCAAATACCATAAGATCTGAAAGATCAGTT TTGCATGGCTTGTCAAATACAGATGGTGGAAAGACTGAGACTGCCAACGCCCCATCCAAA TCAACTTCCCCTATCCTAAGGACTAGTTTGCCACCAACTCCCAATGAAGGAAAACGAAGT GAGAGGATTGCTGCCAAATACCAATCGAAGCAAGTAAATGCAACAACTAATGGAGACAGG GAATCCATTGTTGACCCTGAAGCTATCATCAAGAAGTTGAAGGAAGAAAATTCATCGCTA AAGGAGAGAATCTTGATGGTGCAGGAATCATTATCAAGGGAACTGCAAATCGAGCGGGAT AAGAACAAGTCTCTGACCGAGAGGTTTGAGGATGTGGAGAGGCAACTCGAGTTGGCAATT AAAGAGCAAGAAGCAACGGTAGAACTCTTTGCAGAAGAAAGGAAGTGCCACGACCAAGAG GTGGAAAACCTGAAGCGGAAGCTCACGGTTAGAGGCCTCTTCCACCATTCAGGATCTGAT GGAGCAGCTCAATGCTGCCCGGAACTGCTGCAAGAGATGAAGCAGCAGACGAAGCAACTT CACCCCCCAGTAATACGTTAGTACGTGTATGTCACCAGCATGCTCTTAGCATAAATAATG CCCAGATGGTTGTGGAGCTGTTAGCAGTAGCAGACCAGAATGCTCTATGTATGTTTCACG TCCTGTTGTTAGATGTGTGGTAGCAAGTGTAAGATGATTGAATGAGACTAACGTGATGAA TTCCCTAGGCCCTCATGGTTCCTGATTTAGTGTAATAATAATTAGAGAGG