Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053237_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:221575337:221578465:1 gene:Zm00001d053237 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H(+) antiporter 1
Sequence	ATGGCTAGATCGTTCAACATTTGTCCGCAGATCGACCCCTTGGTGGTCACGCGCGTCCCC GGCGTGGCCCTCGACATGCTGTTCCTCGTAATCATCCAAGCGCTTGCCGTCATCCTCCTC GCCAAGTTCATCCACCTCTTCCTCCAACGCTACAACCAGCCGAGCGCAGTCTCTCAGATC CTCGCCGGAGTTGCGGTGGGCGGCATGGGCCTGCGCAACGCCATCCTGCACGTGGACGTG GACGACGTCGAGGACATGTACGGCGGCTACATCACCTTGGCGCGCGTCGTGTACATGTTC CTCGTCGGCCTCGACCTGGACCTCGCCGCGCTGCGGAACTCCACGCGCCGGTGCGTCGCC CTGGCCTACGCGACCGTGGCCGCCAGCCTGCTCGTGGCCGCCATCGTGTCCAGCGGGATG TACGGCAGCATGATGCACTCCCCGGTGAAGACGCCCGAGCTGCTCGCCGCCACTCTCATG CTGGCGCTCACCAACACCTCATCCATCACCATCTCGCGGATCGCCGGCGAGCTCAACCTC ACAGTGACGGAGAATGGCCGGCTCCTCGTTGCCGCGGCCATCATCACGAACCTCATCTGC GTCGTCGGCGACAGCGTCCTGTCGTCCACGGCACTGGCCAAGGAGAAGAGCCAGGACCTG TACCACACCTCGCCCCAGATCAAGAAGGGCTTCCTGGCGCTCGCCGTGGCAGGCGTCGCT GTGTGGCAGGTGCGCCCCGTTGTGACGCGCATCAACCAGCGCAACGTTGGGCAGCACCAC GTCAGGAGCCGCGACCTGGTGATCATACTCCTGGGCATCTGGTTCATCAGCAACATACAG CAGCTGCTGGGTTTCGACGGGATGCCGACGAGCCTCGCGCTGGGGATGGCGTTCCCGAGG GAAGGCCCCGCCGCGCGTTCCGTCGCCGACGCGCTTATGCCCCCCGTCAACGGCTTGGTC CTGCCCTTCTACTTCGCTACCATCGGGATGAGGCTCGACTACAACTCCATGTCCGGCGCC ATCATCGTGCCCGGCCTGCTACTGACGCTGCTCGGCCTGGTGGCGAAGGCCATCGGCGCC ACGGCCGCCTCCACGTACCTCAACATCCCAATCTCCGACGCGCTCCGCTACAGCGTACTG CTCAACGTCAAGGGCCACGTCGACACCATGAACATGAAGTTCGCCAAATCGGAAGGGGTG TGGGCGGAGCAGGCGCTGTACGCGATGATCATCGGCAACCTTATCAGCACCATCATCGCC GGGCCGGCCGCCGCCGCGGTTCTGAGCAGGGAAAAGGAAGAGTACAAGACAAGGCACCAA GCCATGGAATCGTTGAGCGCAGAGAAAGAGCTGCGCATGCTCGTCTGCGCCCACAGCGCG CACGCCGCGCCCGGCGTCCTCAGCCTAGTCGAGCTCCTGGTGATCACGCCCCACGAGCAG CCGGCCGTGCCAGTCCTCCATTTCTTCGAGGCCCCCCGAGACCGATCCGCCCGGACGCCG TACCACCAGCGGACGCGGGGTGACGAAGGCGCCGAGGACAAAGGCGGCCCCGATCCCGTT ACGCAGATGAACATGGTGGTCGACGTGTTCTCCAAGACGACGGGCATCTCCTTCCGCCAG ATCGACGTGGTGAGCCTCGGCGCGTCTCGGGACGCGGCCGTCGCCTGCCGTGGCGCGGAG GAAGCGCACGCCAGCCTGCTACTCCTCCCCTGCTACAAGGAGCAGCGGTTCGACGGCAAG ATGGCGTGCCGCCTCGAGGAGCGGTGGAAGCTGAACCACGACGTGCTGGAGCGGGCGCCC TGCACCGTGGGGCTCCTCGTGGACCGCCCGTACCGTGGCGGCGGCACTAGCTTCCAAACG CCCATCGACATCGCCCCGGAGACCGGGAGGACGCTGGTGCATCCGTGCAGCGACCGTACG GTGACCCACGTGATAGCGGCCGTGTTCCTGGGCGGGCCCGACGACCGCGAGGCGGTGTCC TTCGCGTGCCGGCTTGCGGAGCACCCGGCCATCGGGCTGACGGTGTTCCGTTTCGTGAAG CGCAGCACGTACGACACCGTGACGTCCTCCACCTCACGCGCCGCCGCGGCGGTGGCGGCC GGCGGCGACGAGCTTGACGTGCCGTTCAAGGAAGGCCACGTGGACGAGCGGTTCCTGTGG CGGTTCTACGAGAACTACGCGTCACGAGAGCTGGCCATGTACGTGGAGAAGGTGGTGGAG AGCCCCGCGGACGTGGTAGAGACGCTAGAAGGGATGTCCGGAATGTTCTCGCTGGTGGTG CTGGGGCGGGGCGGTCGGCAGCCGGTGGAGCTGATGGCCGGGCTGGAGCGGTGGTCGGAG GCCGGCAGCGAAATAGGGCCTGTGGGAGAGATCCTGGCGTCCCACGAGTCGCTAGAGATG GGCTCCGTGCTCGTCATGCAGCAGCACACGGTGGCGCTCTCGCCGCCATGCCAATGA

Peptide Sequence

PEP ID	Zm00001d053237_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:221575337:221578465:1 gene:Zm00001d053237 transcript:Zm00001d053237_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H(+) antiporter 1
Sequence	MARSFNICPQIDPLVVTRVPGVALDMLFLVIIQALAVILLAKFIHLFLQRYNQPSAVSQI LAGVAVGGMGLRNAILHVDVDDVEDMYGGYITLARVVYMFLVGLDLDLAALRNSTRRCVA LAYATVAASLLVAAIVSSGMYGSMMHSPVKTPELLAATLMLALTNTSSITISRIAGELNL TVTENGRLLVAAAIITNLICVVGDSVLSSTALAKEKSQDLYHTSPQIKKGFLALAVAGVA VWQVRPVVTRINQRNVGQHHVRSRDLVIILLGIWFISNIQQLLGFDGMPTSLALGMAFPR EGPAARSVADALMPPVNGLVLPFYFATIGMRLDYNSMSGAIIVPGLLLTLLGLVAKAIGA TAASTYLNIPISDALRYSVLLNVKGHVDTMNMKFAKSEGVWAEQALYAMIIGNLISTIIA GPAAAAVLSREKEEYKTRHQAMESLSAEKELRMLVCAHSAHAAPGVLSLVELLVITPHEQ PAVPVLHFFEAPRDRSARTPYHQRTRGDEGAEDKGGPDPVTQMNMVVDVFSKTTGISFRQ IDVVSLGASRDAAVACRGAEEAHASLLLLPCYKEQRFDGKMACRLEERWKLNHDVLERAP CTVGLLVDRPYRGGGTSFQTPIDIAPETGRTLVHPCSDRTVTHVIAAVFLGGPDDREAVS FACRLAEHPAIGLTVFRFVKRSTYDTVTSSTSRAAAAVAAGGDELDVPFKEGHVDERFLW RFYENYASRELAMYVEKVVESPADVVETLEGMSGMFSLVVLGRGGRQPVELMAGLERWSE AGSEIGPVGEILASHESLEMGSVLVMQQHTVALSPPCQ

Transcript Sequence

Transcript ID	Zm00001d053237_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:221575337:221578465:1 gene:Zm00001d053237 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H(+) antiporter 1
Sequence	ACGGCCACGAAAGTCATGGCCGTCCCTCCAATATGGACGGAAAATGCCCAGAACCAAGCT ATCGCATGCAAGACCGCAGTACGCCCGGAGTTGAATCCGTCTAGTCGACGACTGCCTGCC TGAGGAGACGAACCAGCTTGCCGATCGCCGTACCTACTGTCGAAGAAGTTCCGGAGGTAG CAAGGCCATCTAGCACTCGATCGGCGCCCTCGGCGGCGGCGGCCGACTGCCGGGGCTGCA CAATGGCTAGATCGTTCAACATTTGTCCGCAGATCGACCCCTTGGTGGTCACGCGCGTCC CCGGCGTGGCCCTCGACATGCTGTTCCTCGTAATCATCCAAGCGCTTGCCGTCATCCTCC TCGCCAAGTTCATCCACCTCTTCCTCCAACGCTACAACCAGCCGAGCGCAGTCTCTCAGA TCCTCGCCGGAGTTGCGGTGGGCGGCATGGGCCTGCGCAACGCCATCCTGCACGTGGACG TGGACGACGTCGAGGACATGTACGGCGGCTACATCACCTTGGCGCGCGTCGTGTACATGT TCCTCGTCGGCCTCGACCTGGACCTCGCCGCGCTGCGGAACTCCACGCGCCGGTGCGTCG CCCTGGCCTACGCGACCGTGGCCGCCAGCCTGCTCGTGGCCGCCATCGTGTCCAGCGGGA TGTACGGCAGCATGATGCACTCCCCGGTGAAGACGCCCGAGCTGCTCGCCGCCACTCTCA TGCTGGCGCTCACCAACACCTCATCCATCACCATCTCGCGGATCGCCGGCGAGCTCAACC TCACAGTGACGGAGAATGGCCGGCTCCTCGTTGCCGCGGCCATCATCACGAACCTCATCT GCGTCGTCGGCGACAGCGTCCTGTCGTCCACGGCACTGGCCAAGGAGAAGAGCCAGGACC TGTACCACACCTCGCCCCAGATCAAGAAGGGCTTCCTGGCGCTCGCCGTGGCAGGCGTCG CTGTGTGGCAGGTGCGCCCCGTTGTGACGCGCATCAACCAGCGCAACGTTGGGCAGCACC ACGTCAGGAGCCGCGACCTGGTGATCATACTCCTGGGCATCTGGTTCATCAGCAACATAC AGCAGCTGCTGGGTTTCGACGGGATGCCGACGAGCCTCGCGCTGGGGATGGCGTTCCCGA GGGAAGGCCCCGCCGCGCGTTCCGTCGCCGACGCGCTTATGCCCCCCGTCAACGGCTTGG TCCTGCCCTTCTACTTCGCTACCATCGGGATGAGGCTCGACTACAACTCCATGTCCGGCG CCATCATCGTGCCCGGCCTGCTACTGACGCTGCTCGGCCTGGTGGCGAAGGCCATCGGCG CCACGGCCGCCTCCACGTACCTCAACATCCCAATCTCCGACGCGCTCCGCTACAGCGTAC TGCTCAACGTCAAGGGCCACGTCGACACCATGAACATGAAGTTCGCCAAATCGGAAGGGG TGTGGGCGGAGCAGGCGCTGTACGCGATGATCATCGGCAACCTTATCAGCACCATCATCG CCGGGCCGGCCGCCGCCGCGGTTCTGAGCAGGGAAAAGGAAGAGTACAAGACAAGGCACC AAGCCATGGAATCGTTGAGCGCAGAGAAAGAGCTGCGCATGCTCGTCTGCGCCCACAGCG CGCACGCCGCGCCCGGCGTCCTCAGCCTAGTCGAGCTCCTGGTGATCACGCCCCACGAGC AGCCGGCCGTGCCAGTCCTCCATTTCTTCGAGGCCCCCCGAGACCGATCCGCCCGGACGC CGTACCACCAGCGGACGCGGGGTGACGAAGGCGCCGAGGACAAAGGCGGCCCCGATCCCG TTACGCAGATGAACATGGTGGTCGACGTGTTCTCCAAGACGACGGGCATCTCCTTCCGCC AGATCGACGTGGTGAGCCTCGGCGCGTCTCGGGACGCGGCCGTCGCCTGCCGTGGCGCGG AGGAAGCGCACGCCAGCCTGCTACTCCTCCCCTGCTACAAGGAGCAGCGGTTCGACGGCA AGATGGCGTGCCGCCTCGAGGAGCGGTGGAAGCTGAACCACGACGTGCTGGAGCGGGCGC CCTGCACCGTGGGGCTCCTCGTGGACCGCCCGTACCGTGGCGGCGGCACTAGCTTCCAAA CGCCCATCGACATCGCCCCGGAGACCGGGAGGACGCTGGTGCATCCGTGCAGCGACCGTA CGGTGACCCACGTGATAGCGGCCGTGTTCCTGGGCGGGCCCGACGACCGCGAGGCGGTGT CCTTCGCGTGCCGGCTTGCGGAGCACCCGGCCATCGGGCTGACGGTGTTCCGTTTCGTGA AGCGCAGCACGTACGACACCGTGACGTCCTCCACCTCACGCGCCGCCGCGGCGGTGGCGG CCGGCGGCGACGAGCTTGACGTGCCGTTCAAGGAAGGCCACGTGGACGAGCGGTTCCTGT GGCGGTTCTACGAGAACTACGCGTCACGAGAGCTGGCCATGTACGTGGAGAAGGTGGTGG AGAGCCCCGCGGACGTGGTAGAGACGCTAGAAGGGATGTCCGGAATGTTCTCGCTGGTGG TGCTGGGGCGGGGCGGTCGGCAGCCGGTGGAGCTGATGGCCGGGCTGGAGCGGTGGTCGG AGGCCGGCAGCGAAATAGGGCCTGTGGGAGAGATCCTGGCGTCCCACGAGTCGCTAGAGA TGGGCTCCGTGCTCGTCATGCAGCAGCACACGGTGGCGCTCTCGCCGCCATGCCAATGAT GTCAGATTTCACAGGACAGCAGCAGAACGGTTTGTGATAGATATCTGGACTAGGAAAAAT GGATTTTCTTCTGATGCCCTTTCAGGTCAGTTTCAAGAGTAGTGGATATCCTCCTACATA TTGGACTTGTTGTACTGTGGCATTTGTATCATTGTAAGAAAACAGTTACTTAGGACTCTT CTCTAACATCTTTGTTTTCACCATCAAATCAGTATTTATATCAAGGTCATCATCACTTGA GGA