Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053217_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:220620484:220622928:1 gene:Zm00001d053217 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

ATGGCCCGCTACGATCGCGCGATCACCGTGTTCTCACCCGACGGCCACCTCTTCCAGGTC
GAGTACGCCCTCGAGGCCGTCCGCAAGGGCAACGCCGCTGTCGGCGTCCGCGGTGTCGAC
ACCGTCGTCCTCGGCGTCGAGAAGAAGTCCACCCCCAAGCTCCAGGACTCCAGGTCCGTG
CGCAAGATCGCGAGCCTGGACACCCACATCGCGCTGGCGTGCGCGGGGCTCAAGGCCGAC
GCGCGCGTGCTCATCAACCGCGCTCGCGTGGAGTGCCAGAGCCACCGCCTCACAGTCGAG
GACCCCGTCACCGTCGAGTACATCACGCGCTACATCGCCGGCCTGCAGCAGAAGTACACG
CAGAGCGGAGGGGTGCGCCCCTTCGGCCTCTCCACGCTCATCGTCGGCTTCGATCCCTAC
ACCCAGAAGCCCGCGCTGTACCAGACTGACCCCTCGGGGACCTTCTCCGCTTGGAAGGCC
AACGCAACCGGCCGCAACTCCAACTCCATGCGCGAGTTTCTCGAGAAGAATTACAAGGAG
ACGTCCGGTAAGGAGACCATCAAGCTCGCCATCAGAGCACTCCTTGAGGTTGTTGAGAGT
GGTGGCAAGAACATAGAGATTGCAGTGATGACACACGAGGACGGCCTTCATGAACTCGAA
GAGGCTGAGATTGATGAGTATGTTGCCGAAATTGAAGCAGAGAAAGCCGCTGCCGAGGCT
GCAAAGAAGGGTGCACCAAAGGGGAACTGA

Peptide Sequence

PEP ID

Zm00001d053217_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:220620484:220622928:1 gene:Zm00001d053217 transcript:Zm00001d053217_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGVDTVVLGVEKKSTPKLQDSRSV
RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT
QSGGVRPFGLSTLIVGFDPYTQKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE
TSGKETIKLAIRALLEVVESGGKNIEIAVMTHEDGLHELEEAEIDEYVAEIEAEKAAAEA
AKKGAPKGN

Transcript Sequence

Transcript ID

Zm00001d053217_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:220620484:220622928:1 gene:Zm00001d053217 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

TACGGTTTTGTATTTCATCGTGTCGCCCAAGAAAATCGAAGGAACGCGCCGCCACCGGCC
GCAACAAAGCAACGCAGGCCTCCGGCCTCCCTGAACTGACTTCAGAAGTCACCAACGCAC
CCAGCACAGACAGAAGACCCTCGCCGGACGCTCGCTCTCGCCGGGGACAACTCAATCACG
AGGCCAGGATGGCCCGCTACGATCGCGCGATCACCGTGTTCTCACCCGACGGCCACCTCT
TCCAGGTCGAGTACGCCCTCGAGGCCGTCCGCAAGGGCAACGCCGCTGTCGGCGTCCGCG
GTGTCGACACCGTCGTCCTCGGCGTCGAGAAGAAGTCCACCCCCAAGCTCCAGGACTCCA
GGTCCGTGCGCAAGATCGCGAGCCTGGACACCCACATCGCGCTGGCGTGCGCGGGGCTCA
AGGCCGACGCGCGCGTGCTCATCAACCGCGCTCGCGTGGAGTGCCAGAGCCACCGCCTCA
CAGTCGAGGACCCCGTCACCGTCGAGTACATCACGCGCTACATCGCCGGCCTGCAGCAGA
AGTACACGCAGAGCGGAGGGGTGCGCCCCTTCGGCCTCTCCACGCTCATCGTCGGCTTCG
ATCCCTACACCCAGAAGCCCGCGCTGTACCAGACTGACCCCTCGGGGACCTTCTCCGCTT
GGAAGGCCAACGCAACCGGCCGCAACTCCAACTCCATGCGCGAGTTTCTCGAGAAGAATT
ACAAGGAGACGTCCGGTAAGGAGACCATCAAGCTCGCCATCAGAGCACTCCTTGAGGTTG
TTGAGAGTGGTGGCAAGAACATAGAGATTGCAGTGATGACACACGAGGACGGCCTTCATG
AACTCGAAGAGGCTGAGATTGATGAGTATGTTGCCGAAATTGAAGCAGAGAAAGCCGCTG
CCGAGGCTGCAAAGAAGGGTGCACCAAAGGGGAACTGATTCCGCACAAGCTTAGATTGCG
CCTCTTGTTCCAGAGCATGTCTTATGATTCACCTCTTAGATGATTGCCCGGATGTTTGGA
TACAGGAATATTTATAAAAAAAATTAAGATGAAGCCGCTTGGATGAAAACATGCTATGTG
ATGCATAGTATTGCAATACCATGGTGGTTTGTTGTGTGACTTGTCGCAGTGGTCTCTTGA
TCTGTCAGTATTATTTTCTGGAACCTGTCAGTATTATTTTCTGGAACCTGGATGCTACTC
GATTAAGAGCCTTGTGTTGTTGGTATTGT