Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053208_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:220087908:220093065:-1 gene:Zm00001d053208 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHI/STY (SRS)-transcription factor 3 description:SHI
Sequence	ATGGCGGGCTTCCCTCTAGGCGGAGGAGGCCACGGCCGCGGCGACCACCACCACCCTCAC GTGAACCCTTCCTCCGGCTCCGGCTCCGACTCCGCGGCCGCCGCCTACCTCTACACGGCC GCCGCCGCGCCGCGCGGCGGCTTCCAGCTATGGCCGCCTCACCCGGCGCAGGAGCACCAC CACCACTTCTACGCCCCCAACATAATCCGCTTCGCCGATGACCCCGCCGCGGGCTCCTCG CGCGGCGGCAGGGGCTCCGCCAGCGGCGCCGGCGCGGGCACCATCAGCTGCCAGGACTGC GGCAACCAGGCCAAGAAGGACTGCGTCCACATGCGCTGCCGCACCTGCTGCAAGAGCCGG GGCTTCGACTGCCCCACCCATGTCAAGTCCACCTGGGTGCCCGCCGCCAAGCGCCGGGAG CGCCAGCAGCAGCAGGCCACCGGCGCCGCCGAGCCCTCCAAGCGCCACCGTGACGCCGCT ACCGGTGCCCAGCCCTCCTCTACCACCGCCACAACCACTTCCTCGGGTGAGCAGCAGCAG ATGGCGGTGGTGGCGGAGCGGTTCCCGCGGGAAGTGAGCTCGGAGGCGCTGTTCCGCTGC GTCCGCCTGGGCCCGGTCGACGAGCCCGACGCCGAGGTGGCGTACCAGACCAGCGTCAGC ATCGCCGGCCACGTCTTCAAGGGCATCCTGCACGACGTCGGCCCGGAGCCGTCGACGGTC GCTGCGGGCGGCGGCTTCCGCCACGCCACCGAGGGGTCCTCCCCTAGCACGGCCGCGGCG GGCGAAGGCAGCGTCGTGGGGCCCGTCTCGTCATCGGCTGTGGTCATGGACCCGTACCCG ACGCCCGGCCCGTACGGCGCCGCTCATTTCTTCCACGGCCATCCGAGGTGA

Peptide Sequence

PEP ID	Zm00001d053208_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:220087908:220093065:-1 gene:Zm00001d053208 transcript:Zm00001d053208_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHI/STY (SRS)-transcription factor 3 description:SHI
Sequence	MAGFPLGGGGHGRGDHHHPHVNPSSGSGSDSAAAAYLYTAAAAPRGGFQLWPPHPAQEHH HHFYAPNIIRFADDPAAGSSRGGRGSASGAGAGTISCQDCGNQAKKDCVHMRCRTCCKSR GFDCPTHVKSTWVPAAKRRERQQQQATGAAEPSKRHRDAATGAQPSSTTATTTSSGEQQQ MAVVAERFPREVSSEALFRCVRLGPVDEPDAEVAYQTSVSIAGHVFKGILHDVGPEPSTV AAGGGFRHATEGSSPSTAAAGEGSVVGPVSSSAVVMDPYPTPGPYGAAHFFHGHPR

Transcript Sequence

Transcript ID	Zm00001d053208_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:220087908:220093065:-1 gene:Zm00001d053208 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHI/STY (SRS)-transcription factor 3 description:SHI
Sequence	ACTACCTTCCTTTCCGCTCCATCCTTCCCCTCCCTCTCCTCTCCTCTCCTCTCCTCTCTA CTCCCCCTCACTCGCAGACACGCCAAAATTCTAGGGAACCCCCACTACGCCTGCACGCGC CCACTAGCTAGCCACCTTAGATCGGTCGATACAGCTAGCTATACCCGCTAGCTGCACCTC TCGCTGCCGCCGCCCGGCCGGGCCGCGCGAGACCGCTCAAAATTCGCGCGCACCGCCACG CGGCGCGGACATGCTGCGGGCGGCGGGGAGCAGCTAGCAGGTAGCCGAGCACGGCAGGGC GACCCGGCGCGCGATCCGCCGCTGCCCGCGTGGGCGGCCGCCTATGGATCTGGCCGCATG GCGGGCTTCCCTCTAGGCGGAGGAGGCCACGGCCGCGGCGACCACCACCACCCTCACGTG AACCCTTCCTCCGGCTCCGGCTCCGACTCCGCGGCCGCCGCCTACCTCTACACGGCCGCC GCCGCGCCGCGCGGCGGCTTCCAGCTATGGCCGCCTCACCCGGCGCAGGAGCACCACCAC CACTTCTACGCCCCCAACATAATCCGCTTCGCCGATGACCCCGCCGCGGGCTCCTCGCGC GGCGGCAGGGGCTCCGCCAGCGGCGCCGGCGCGGGCACCATCAGCTGCCAGGACTGCGGC AACCAGGCCAAGAAGGACTGCGTCCACATGCGCTGCCGCACCTGCTGCAAGAGCCGGGGC TTCGACTGCCCCACCCATGTCAAGTCCACCTGGGTGCCCGCCGCCAAGCGCCGGGAGCGC CAGCAGCAGCAGGCCACCGGCGCCGCCGAGCCCTCCAAGCGCCACCGTGACGCCGCTACC GGTGCCCAGCCCTCCTCTACCACCGCCACAACCACTTCCTCGGGTGAGCAGCAGCAGATG GCGGTGGTGGCGGAGCGGTTCCCGCGGGAAGTGAGCTCGGAGGCGCTGTTCCGCTGCGTC CGCCTGGGCCCGGTCGACGAGCCCGACGCCGAGGTGGCGTACCAGACCAGCGTCAGCATC GCCGGCCACGTCTTCAAGGGCATCCTGCACGACGTCGGCCCGGAGCCGTCGACGGTCGCT GCGGGCGGCGGCTTCCGCCACGCCACCGAGGGGTCCTCCCCTAGCACGGCCGCGGCGGGC GAAGGCAGCGTCGTGGGGCCCGTCTCGTCATCGGCTGTGGTCATGGACCCGTACCCGACG CCCGGCCCGTACGGCGCCGCTCATTTCTTCCACGGCCATCCGAGGTGATGATCAAACGGC CACCATGATTGACACGGCTAGCTAGCCTAGCTGATGGGTTTCGTTCTCTTTGGACATGCC ATGCATCTTTCCATCCACTGCTTCAATATTTGCTTTACTGGAGGGATTATCGATCGTCAC CAAATTGTTACTAGTAGTTTTTATTTGTCTCCGTCCTCCATCCCTCTTCTCTCTTACATT CTCAATGATCGATGCATAAACTGATGAGCACCATTCATCACTGTTTCTTTCGGATCAGTT CTTACTGTCGCAGTAGCTAGCCCATCAGGTTGTTGCTAGAAGTAAATATAAAGCTTGGAG TAGCTAGCTAGGAAACTGTGTTCATCATGATTCAAAGTTTAAAACCTGACAGTTAGGTAA TCTTGATTGATGCTCTTGTCATTGCTTCTTCATCCTTTCATCTTTGTTCAATGGTCGTGA TGATGCTGTCCCCCTGGTGGTGTCAGGAAGATATATAGAATGTTGGGGCTTAAGAAGGCT TCTTCGCATATTTGCTCAAGTATATACAGTACTACTGCCCTCTTCCTTCTACTACTCCTG TGTGTGTGTCACACCTTTGCAGCTTTGCTTTAGCTTTTCTCTTCAAAAGCTGAACCCTAG TTTCCTAGCTAGTGGCAACTGCTAGATGATTCTTAGTTGGAAAATTTGGTAGTATGAATG ATAGGAGTACCTGTGTATGTCATGGTCGGTAGAGAGAGGGGGAGTGAGAGGAGAGTGGAG AGAGGAGAGATAAATGATTTCTTCCAGTCATCATATGCTCAAGGAAGAAGGCAGGTGGAG TCAGATATCTATGTCTCGAGAAGAATCAAATGACGAGACGCTTGGGGAGAAAAAAAAGAA TAATGCTAGTCACTATGCGCTTGTACCAGTTCTGATTAGAGCGTTACCGATGTTTCCTAG TTTGGTATTTGGAAACAGCTTCTCCACTGTGGGACTGGGATCCCAACCTATATTCCGATC CATCATATTTCATCACATCTCCAATCCAATTGCCATTGCCAGTGTCATTTCAACCAGTTA CATTTTCTATACGCAGTTGCACTTGTTGAAGTTCTGTCAGCACATAACTAATTAATTTAG TACATAATGTAATTGTAATAATATTATCATGGCCCAAAAAGCCATGCTGGTCATTCTCTC TTTTTCCTGAAATCATGGGAGATTCAAATATCTGGGAACGTCGTTCTCCCTTTTCCACAT TTTTTTTCCTGTTTTTTTAGGATTAGTGGAGTTAACTGAAAAAAAATCAAAGTCAAACAT TGTTTTGATACACCACTAAAAAGATTGCAAACATTGTTCTCGATACACACCACCACTAAA CATTGTGATATTATTTTTACCTTGCAATGTTTTGAAAACATTACATTTTGCCTTCAGTTT CCTAAAAAACATATTCTTAGTACAATGACGGCAATCAAGTATTATTGGTCTCTCAGGCTC TACCTTGCACCGCAAATATGCGTAGTGTAGAGTATTTGTGAGAACTCAATCATCATACGA TTATTTAATGTGTATGGTTAACCGATTTGCATATGCAATAATACTGATAAAATTTCAAAC TTCATCAACAAAAGATTCATTATGTTTGATTAAGGACTTACTGCTTCAAAATAATGTGTA TTTCTGTATGTGCTATATTTATGTTTTTGATGATATGGTATTGTGTGCATATATATACAT CTGAACTATATTTATTTTTTTCTACATTTGCATGGCATCAATGTCTGATTATGGGTTGTT CATTATGAATAAAAAGGTTAGCGCGGGTGTGCCCTACTTTAAGATAGTATTTGTCTTCTT AGGATTTTAGAACTGCTGGTAGTAGATGTATTTATTTTCCTTTCCAAGGTTACCAATGCA ACGTTGAATGTTCTGAAAATTGTCTTCGTTAATGCTCTTGCAGTATAAAAGCTTATAGTC TAGAATTCTCTGACATGGGCATTTTCCCTTCTGTTGATACTATGCATTTGTTGCGTTATT AATATGCGGTATTGAACTTGTAGATAGGTCGGATTTGTATGAAGATAGCTGCGTTAACCT ATTATTCTCAGCTTTGCTAAGAAGATAATATTAATTTTCAAAAGGCTGCAACTTTTTGGC GAGATTCGTTCCAATTTAATAAGCGCAATTGCTCCCATATATTTATTTGGACTACCTAGA TTCAATTGGTTCTAAAACACGTACTGGAACTTGATAGTACAGCTGCTCCCTTAATTTACA GGAGATATATATATGAATTTAGAGGTTGTTTGGTTTTTGTGAACTAATTTTTAGGCACTC GATTTTATTCTATTTTTAGGTCCTAAATTACCCGATACGAAAACTAAGAACTTTATTTTA GTTTCCATATTTAGTAATTTAATAACTAAAATTAAATAAAATTGAGGGACTAAAAAATAG TCCCTGAAAACTAAACACCCTCTTAGTTTGATGAGCCTTCTATATATATTCAATGCTAAA AAAACTTAGAGATGTTTTATGTTTTGTGACACACACTGTAGTGTGCTTATGTTTACATTT CTGTCAAATTGATGGTCGTCGATTGTGTTTACTGCTGGTGGTCTATAATTTTAAGAAACA CTGACAGGAACATGAAGCAATAGTTTGGACAAGACATTATTTGACCTCCAGGCACACTAT GGTGGCCGACCTTTATTTCGCTATCCTGTTAATATTTGTTACGCAGACAACAATGCTAAA TCTGCAAAATTTATCTAAAGTTAGTCAGATATAATCACCCCATTATATATGTACTTGTTT GACGGATCAGATGCTCTCAGCTAATTGGTATACATGCGTGTTGCCTCTTGAAATTATAGA GGAGCTAATTAAGGCTAAGCTACCAGCGGTACCTGTAATTTAGTTTCTCATCAGTAGAAT TGTCCAAACTATTTATGCGTGTTGCGAGATTTTGCTGTGTGGTGAGCACAAAGTGGCATT TTTAAAGAGATAAAACGTACGGCACGCGAATTCATTGGTTTCTTAAAAAGTAAGCACTCT CTTGTTCATCAAATAACTAAAGTATTCCATATTTTTTAGCTAATTAACTAGAAGTCACAA TCAGGCACATGGTGATTCGGCCTAATCTCTTTGGCTTTGGTCTGTTCCTTTCAATCGAAA AGGCTAGCTGGAACAATAATCGTCAGTAACTCCCTTGGAAGTTTGCTAGAGAAATTTCAT GCGTACGTTTTCGATTCTGGATCATGCGTATATACTAAATAAGTCAAAAGTTTGTTAACT GTTCATATAATATTGTGCTGTAGTATATGTAATCTTTGCATATGCATGCATATAGTGTTA GCTGTTCATAGAAACCTTTTGATAGCTTCTACTGAGACTGATTGGACCTACGACCATTGT ATATTAGAACAATATATATACAATGGTATATATTGTTTATCTGTAAGTAGCATCGCGGGT ATCTTGTTCTAATCTGTCGTCGTCACACACATATCTTAGAAAGCCGCAAATGAACCAGTG TTTTATTGTATATATGGCTTCTTTCTTCACGCCGCATCTTATTTGGACATTGATACATAT ATATGGTTAATAAGTAAAGCTTAGCATCTAATTCGCTCGATCCTTTTAGGTTAATTTTCT GCCTTTATTTTTTCTTCTTCTCTACAAGCATTACACGTACAAACTATTTTTTTACAGTAG ATATTTGTACAAGCATTACGCTTTGGTGATTATTTGTTAGTTTTTTTAACCAAATTGTAC AAGAAGCATTACATGATATTTGTACGAACGCGAAAAAGATGTTCGCC