Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053195_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:219203452:219206136:1 gene:Zm00001d053195 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 111 description:Putative AP2/EREBP transcription factor superfamily protein

Sequence

ATGTGCTGCGCGCCCAAGGTGGCGAACGCGGAGGGACGAGGGCCCTGTCGTTGCTGCGCC
GGCGGTGAGGAGGACGACGAGGACGGCCAGCAGCCGGCAGCGGCGTGGCGAATGCTATCG
GGGTACGAGCGGAGCCGGGAGGCGTCCATGATGGTCGACGCGCTGGCCACGGTCGTCGCT
GGCGGGGCAACGCCGCCGGCAACGGCCGGTGCCCGTCAGCAGCAGGTATCGCCTGAGGGC
CAGTGGTGGAGCGACTACTACGCCGGAGATGTAACGCCGCCGCCCTCTCTTCCTGCACCG
GCCGCTCACGCAGAGCACGGAGCGGCACGGATTCCCGCGACGGCGGCGTCACCCAGCTCT
AGCTCGCAGCCCCCCTCGCCGTCCTCCACCGGCTCCGGCACGCCGCGGAGGCGGTACCGC
GGTGTGCGGCAGCGGCCGTGGGGTAAGTGGGCGGCGGAGATCCGGGATCCTCACAAGGCG
GCGCGCGTGTGGCTAGGCACCTTCGACACCGCGGAGGCCGCCGCCCGGGCGTACGACGTG
GCGGCGCTCAGGTTCCGCGGCAGCCGCGCTAAGCTCAACTTCCCGGAGTCCGCCACGCTC
GCGGCGCCACCGTCGGCGGCCGCGGTTCCTCCTCCTCCGTCGCCGCCGCCGCAGAGGCCC
GAGGCGCTGCTCGAGTCGCAGGCGCTGGCGCTGGCGGGTGGCCAGGAGTACTCAGAGTAC
GCCAGGTTCCTGCAGTGCCCCGCCGATCCACCGCGACTCTACGACCAGGCGCCTGCGGCG
ACCGTGCCCTCCGCGGCGTCCGGATCGGCGTCTTCGTCGTTCCCGGTGCTCTTCAGATTC
GGCGGAGGAGGTGAGAGCAGCGGCGTGGCGAGCAGTCAGTGGTGGACGCAGGGCAGCCGC
TCCGTGAGCCAAGAAGGAGCCGGCTCCCCGCCGGCGAGCTGGGCGGACTCTGCTTGGTGG
CCGGCGCCTCCGCGGGACCCGCCACGGTGA

Peptide Sequence

PEP ID

Zm00001d053195_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:219203452:219206136:1 gene:Zm00001d053195 transcript:Zm00001d053195_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 111 description:Putative AP2/EREBP transcription factor superfamily protein

Sequence

MCCAPKVANAEGRGPCRCCAGGEEDDEDGQQPAAAWRMLSGYERSREASMMVDALATVVA
GGATPPATAGARQQQVSPEGQWWSDYYAGDVTPPPSLPAPAAHAEHGAARIPATAASPSS
SSQPPSPSSTGSGTPRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDV
AALRFRGSRAKLNFPESATLAAPPSAAAVPPPPSPPPQRPEALLESQALALAGGQEYSEY
ARFLQCPADPPRLYDQAPAATVPSAASGSASSSFPVLFRFGGGGESSGVASSQWWTQGSR
SVSQEGAGSPPASWADSAWWPAPPRDPPR

Transcript Sequence

Transcript ID

Zm00001d053195_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:219203452:219206136:1 gene:Zm00001d053195 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 111 description:Putative AP2/EREBP transcription factor superfamily protein

Sequence

GACGAGACGAGGGACGCACAGGCCATACATACTACATTCATGTGCTGCGCGCCCAAGGTG
GCGAACGCGGAGGGACGAGGGCCCTGTCGTTGCTGCGCCGGCGGTGAGGAGGACGACGAG
GACGGCCAGCAGCCGGCAGCGGCGTGGCGAATGCTATCGGGGTACGAGCGGAGCCGGGAG
GCGTCCATGATGGTCGACGCGCTGGCCACGGTCGTCGCTGGCGGGGCAACGCCGCCGGCA
ACGGCCGGTGCCCGTCAGCAGCAGGTATCGCCTGAGGGCCAGTGGTGGAGCGACTACTAC
GCCGGAGATGTAACGCCGCCGCCCTCTCTTCCTGCACCGGCCGCTCACGCAGAGCACGGA
GCGGCACGGATTCCCGCGACGGCGGCGTCACCCAGCTCTAGCTCGCAGCCCCCCTCGCCG
TCCTCCACCGGCTCCGGCACGCCGCGGAGGCGGTACCGCGGTGTGCGGCAGCGGCCGTGG
GGTAAGTGGGCGGCGGAGATCCGGGATCCTCACAAGGCGGCGCGCGTGTGGCTAGGCACC
TTCGACACCGCGGAGGCCGCCGCCCGGGCGTACGACGTGGCGGCGCTCAGGTTCCGCGGC
AGCCGCGCTAAGCTCAACTTCCCGGAGTCCGCCACGCTCGCGGCGCCACCGTCGGCGGCC
GCGGTTCCTCCTCCTCCGTCGCCGCCGCCGCAGAGGCCCGAGGCGCTGCTCGAGTCGCAG
GCGCTGGCGCTGGCGGGTGGCCAGGAGTACTCAGAGTACGCCAGGTTCCTGCAGTGCCCC
GCCGATCCACCGCGACTCTACGACCAGGCGCCTGCGGCGACCGTGCCCTCCGCGGCGTCC
GGATCGGCGTCTTCGTCGTTCCCGGTGCTCTTCAGATTCGGCGGAGGAGGTGAGAGCAGC
GGCGTGGCGAGCAGTCAGTGGTGGACGCAGGGCAGCCGCTCCGTGAGCCAAGAAGGAGCC
GGCTCCCCGCCGGCGAGCTGGGCGGACTCTGCTTGGTGGCCGGCGCCTCCGCGGGACCCG
CCACGGTGACGTCCCTGACTCCCTGTCAGGCTTGTCTCTGCAAGCCAATCCTGCAGTCTG
CACCGAGCGAGTCCGGATTGCCAGTTCGTTGGCACGTGTACCGATTCTTTTTTTTTTTGT
TTCCTGCAAAAAACAAAAAAAAAGCTTTCTTTGAGAGGATGTATCGAAATTCGTATTGTT
GGATTCTTTCTTCTTTGAGATGCTTGGCTTCTTAT