Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053182_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:4:218560699:218582057:1 gene:Zm00001d053182 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative serine esterase family protein
Sequence

ATGACGAGAATCGAGCACCCATCTCGCCGGCCAGGGTCACGCAATACGAAGGTGGATTAT
GCAGCTATTGATATTGGTGTGAAGAGCTCATTTGGCTTTTGGAAAATAGACGATGTTGAC
AATAGCTTCTACACACAGCCGTTTCTTGTTAAATATTCTAGGCAAGATATTTATCTATCA
GTTATGGTGTCCTTCTACATACCCAACAGCGAAGACGAGGGTCCAGCAACTTCTTCTGTT
ATATTGAAGTTCGAGCTCATATATATCCCAACACTGGGGAATGCATGGACTGACGTTCAA
GATTCAAGTGATGATACAGATTTGATCCCTGTCCATGAATTTAGGATCCCACATAGAGCA
CTCCTAGGCTTACACTCGTATTGCCCTGTCCATTTTGACGCATTACACTCGGCGCTAGTG
GATCTGACAATACACATTGTCTACCTGAAAGCTGCTGTGACTAAATCATCACTGAAGCCG
CTGGAACAAAGTTTTGGCTCAAAGTCATATGGTATTGTGAAAGCATCACTAATATCTAGG
GAAATACTTCTTGAAGAAGTGAAGAAGATCAGTAATGCTGTTGGTAGCACTCTTGAGGAT
TTGGATCGCACTGACTTAACCCTTGGTAAATATGAGACAGTTCAACCATCAAAGTCAGCT
TCGCCCAGTTACAGTTATGGGCAGGGTACGCCCACAAAGTGTAGTCCCCAGATGACTGGC
ATCTTACGTGATTTTCTTGAGAGTTCTGGGGTTGTGGTTGGAAGCACTGATGATATCTTG
CTGTATACTCTATCTGAGGAAGAATTGTTTGAACTATTTCAAATTGTCAGCAGCCAACTC
TCATTTATATGGAATGAGTTCTTGAAATTCCATAGGACACATAAAGACAAGGTAATGGGT
TATTTGCATGATATGTGGGATATTAATCGGAAAGCAGAATGGTCAATATGGATTATTCAT
TCAAAGATTGAGATTCCACATCGCTATTTGAGAAGCATGAATGACGACTCTCCTCGCCAT
TTGATTCGGATTTCCAGTTCAAGAAAGGTCCATCATGATCCTATACAAAATTCGATGTCA
CAGGCTGAACTGCACAGGAAAAGTATAGCACAAATGAAGATTAACACGCCGTCTGTTCAA
GATATGCATATTTATGCTGATCCTTCATGTATACCTGTTGTCCGCATAGAGCAGCATGTC
ATGGTTATTCCGCAACATTGTTCTAGCAAGGATTTTCTAACAGATGCTTCAGAACCAGCT
CGTACTATTGTGCCACCACCTCTACTACAAGGACAATCATTGGGGGAAGAAACTTGTGGT
TTCAAGAGTGGACGCATTTTACGAGCTGTCATTTTTGTGCATGGATTTCAGGGGCATCAT
CTGGATTTACGTCTTGTTAAGAACCAATGGCTTTTGCTTGATCCTGGGGCTGAGTGCCTA
TTGTCTCAGATAAATGAGGATAGAACGTCTGGGGATTTTAAAGAAATGGGTAGAAGGCTC
GCTAATGAAGTAGTGGCATTCCTCAAAAGGAAGGTGGACAAGTACTCCAGAAATGGAGGT
TGCAAAGAGATTAAGCTCAGTTTTGTCGGTCATTCTATTGGGAACATTATCCTCAGAAGT
GCCCTCACAGAACCCAAATTGCAGCCATTTTTGAAGAACCTGTATACATACATGTCCATA
TCGGGACCTCACTTGGGTTACTGGTACAGCCCAAATTCTCTGTTCAACTCTGGCCTCTGG
CTCATGAAACGGCTCAAGGGCATGCAGTGCATGCATCAGCTCACTTTCAGTGATGACCAC
GACCCACAGAACACGTTCTTTTACAAGCTCTGCAAGCTGAAGACACTGGAGAACTTCAAG
AACATCATCCTGGTATCGTCACCGCAGGATGGTTACGTCCCATACCATTCAGCAAGAATC
GACCTCTGCCACGCCTCGTCGTCAGATAACTCGAAACGCGGGCAGGTGTTCACTGAGATG
CTGAACAATTGCTTGGACCAGATCCGGGCACCAACGTCGGAAACTCGGGTATTCATGCGT
TGTGACGTGATATTCGACCAGTCCGCCCAAGGACGGAACCTGAACACCATGATCGGCAGA
GCTGCGCACATAGAGTTCCTGGAGAACGACATCTATGCAAGGTTCATCATGTGGTCCTTC
CCAGAGTTGTTTCGGTGA

Peptide Sequence

PEP ID

Zm00001d053182_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:4:218560699:218582057:1 gene:Zm00001d053182 transcript:Zm00001d053182_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative serine esterase family protein
Sequence

MTRIEHPSRRPGSRNTKVDYAAIDIGVKSSFGFWKIDDVDNSFYTQPFLVKYSRQDIYLS
VMVSFYIPNSEDEGPATSSVILKFELIYIPTLGNAWTDVQDSSDDTDLIPVHEFRIPHRA
LLGLHSYCPVHFDALHSALVDLTIHIVYLKAAVTKSSLKPLEQSFGSKSYGIVKASLISR
EILLEEVKKISNAVGSTLEDLDRTDLTLGKYETVQPSKSASPSYSYGQGTPTKCSPQMTG
ILRDFLESSGVVVGSTDDILLYTLSEEELFELFQIVSSQLSFIWNEFLKFHRTHKDKVMG
YLHDMWDINRKAEWSIWIIHSKIEIPHRYLRSMNDDSPRHLIRISSSRKVHHDPIQNSMS
QAELHRKSIAQMKINTPSVQDMHIYADPSCIPVVRIEQHVMVIPQHCSSKDFLTDASEPA
RTIVPPPLLQGQSLGEETCGFKSGRILRAVIFVHGFQGHHLDLRLVKNQWLLLDPGAECL
LSQINEDRTSGDFKEMGRRLANEVVAFLKRKVDKYSRNGGCKEIKLSFVGHSIGNIILRS
ALTEPKLQPFLKNLYTYMSISGPHLGYWYSPNSLFNSGLWLMKRLKGMQCMHQLTFSDDH
DPQNTFFYKLCKLKTLENFKNIILVSSPQDGYVPYHSARIDLCHASSSDNSKRGQVFTEM
LNNCLDQIRAPTSETRVFMRCDVIFDQSAQGRNLNTMIGRAAHIEFLENDIYARFIMWSF
PELFR

Transcript Sequence

Transcript ID

Zm00001d053182_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:218560699:218582057:1 gene:Zm00001d053182 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative serine esterase family protein
Sequence

GATTCGCCGCCGTGTGGCGATCCCTGCACGGACGTCGGTCGGTCGCCATGGAGACGGCGC
ATGAGGTGGCCATTTACATCGACCGCTTCCACAACCTGGACCTGTTCCAGCAAGGATGGT
ACCGCGTGAAGATTAGTGCCCTGTGGGAGGATGACGAGAATCGAGCACCCATCTCGCCGG
CCAGGGTCACGCAATACGAAGGTGGATTATGCAGCTATTGATATTGGTGTGAAGAGCTCA
TTTGGCTTTTGGAAAATAGACGATGTTGACAATAGCTTCTACACACAGCCGTTTCTTGTT
AAATATTCTAGGCAAGATATTTATCTATCAGTTATGGTGTCCTTCTACATACCCAACAGC
GAAGACGAGGGTCCAGCAACTTCTTCTGTTATATTGAAGTTCGAGCTCATATATATCCCA
ACACTGGGGAATGCATGGACTGACGTTCAAGATTCAAGTGATGATACAGATTTGATCCCT
GTCCATGAATTTAGGATCCCACATAGAGCACTCCTAGGCTTACACTCGTATTGCCCTGTC
CATTTTGACGCATTACACTCGGCGCTAGTGGATCTGACAATACACATTGTCTACCTGAAA
GCTGCTGTGACTAAATCATCACTGAAGCCGCTGGAACAAAGTTTTGGCTCAAAGTCATAT
GGTATTGTGAAAGCATCACTAATATCTAGGGAAATACTTCTTGAAGAAGTGAAGAAGATC
AGTAATGCTGTTGGTAGCACTCTTGAGGATTTGGATCGCACTGACTTAACCCTTGGTAAA
TATGAGACAGTTCAACCATCAAAGTCAGCTTCGCCCAGTTACAGTTATGGGCAGGGTACG
CCCACAAAGTGTAGTCCCCAGATGACTGGCATCTTACGTGATTTTCTTGAGAGTTCTGGG
GTTGTGGTTGGAAGCACTGATGATATCTTGCTGTATACTCTATCTGAGGAAGAATTGTTT
GAACTATTTCAAATTGTCAGCAGCCAACTCTCATTTATATGGAATGAGTTCTTGAAATTC
CATAGGACACATAAAGACAAGGTAATGGGTTATTTGCATGATATGTGGGATATTAATCGG
AAAGCAGAATGGTCAATATGGATTATTCATTCAAAGATTGAGATTCCACATCGCTATTTG
AGAAGCATGAATGACGACTCTCCTCGCCATTTGATTCGGATTTCCAGTTCAAGAAAGGTC
CATCATGATCCTATACAAAATTCGATGTCACAGGCTGAACTGCACAGGAAAAGTATAGCA
CAAATGAAGATTAACACGCCGTCTGTTCAAGATATGCATATTTATGCTGATCCTTCATGT
ATACCTGTTGTCCGCATAGAGCAGCATGTCATGGTTATTCCGCAACATTGTTCTAGCAAG
GATTTTCTAACAGATGCTTCAGAACCAGCTCGTACTATTGTGCCACCACCTCTACTACAA
GGACAATCATTGGGGGAAGAAACTTGTGGTTTCAAGAGTGGACGCATTTTACGAGCTGTC
ATTTTTGTGCATGGATTTCAGGGGCATCATCTGGATTTACGTCTTGTTAAGAACCAATGG
CTTTTGCTTGATCCTGGGGCTGAGTGCCTATTGTCTCAGATAAATGAGGATAGAACGTCT
GGGGATTTTAAAGAAATGGGTAGAAGGCTCGCTAATGAAGTAGTGGCATTCCTCAAAAGG
AAGGTGGACAAGTACTCCAGAAATGGAGGTTGCAAAGAGATTAAGCTCAGTTTTGTCGGT
CATTCTATTGGGAACATTATCCTCAGAAGTGCCCTCACAGAACCCAAATTGCAGCCATTT
TTGAAGAACCTGTATACATACATGTCCATATCGGGACCTCACTTGGGTTACTGGTACAGC
CCAAATTCTCTGTTCAACTCTGGCCTCTGGCTCATGAAACGGCTCAAGGGCATGCAGTGC
ATGCATCAGCTCACTTTCAGTGATGACCACGACCCACAGAACACGTTCTTTTACAAGCTC
TGCAAGCTGAAGACACTGGAGAACTTCAAGAACATCATCCTGGTATCGTCACCGCAGGAT
GGTTACGTCCCATACCATTCAGCAAGAATCGACCTCTGCCACGCCTCGTCGTCAGATAAC
TCGAAACGCGGGCAGGTGTTCACTGAGATGCTGAACAATTGCTTGGACCAGATCCGGGCA
CCAACGTCGGAAACTCGGGTATTCATGCGTTGTGACGTGATATTCGACCAGTCCGCCCAA
GGACGGAACCTGAACACCATGATCGGCAGAGCTGCGCACATAGAGTTCCTGGAGAACGAC
ATCTATGCAAGGTTCATCATGTGGTCCTTCCCAGAGTTGTTTCGGTGATGATGGTGATGA
TGTGCTCCTGGACCTGGAGATGATCTGAATACGTATCACACAAGTCATTATCCATTACAG
TATATAACCGCAGCATTCGTGTTGTTTTTAATGAATTTTAGATGCGAGACACAATTTTTT
GCTCTGTTGCCCCGTCACCTAGCAATCGCAGAGCATAAAATTCATCTGGACAGACAAATT
ATGGTTTGGTATCAACAACTAGTCCGATTGGGATATGTACAAATACGAGTGATGTTTGTG
AAACAAATGGTGGCGTGTCATGTGTTGTGAGAATAATGGGGTGTTTGAATACACTATAAC
TAATAGTTAACTGCTAAAATTAG