Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053177_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:4:218290860:218293089:1 gene:Zm00001d053177 gene_biotype:protein_coding transcript_biotype:protein_coding description:Actin-7
Sequence

ATGGCTGACGGTGAGGACATTCAGCCCCTTGTTTGTGACAATGGAACTGGCATGGTCAAG
GCTGGTTTTGCTGGTGACGATGCGCCAAGGGCTGTTTTCCCAAGCATTGTCGGACGCCCC
CGTCACACTGGTGTGATGGTTGGCATGGGGCAGAAGGATGCGTATGTTGGTGACGAGGCC
CAGTCCAAGAGGGGTATCCTGACTTTGAAGTACCCCATCGAACATGGTATTGTTAGCAAT
TGGGATGACATGGAGAAGATCTGGCACCACACCTTCTATAATGAACTCCGTGTGGCGCCT
GAAGAGCACCCTGTGCTGCTGACGGAAGCCCCACTCAACCCCAAAGCTAACAGGGAGAAG
ATGACCCAAATCATGTTTGAGACCTTCAATGTTCCTGCCATGTATGTCGCCATCCAGGCT
GTGCTTTCCCTGTACGCCAGTGGGCGTACAACTGGTATTGTGTTGGACTCTGGTGATGGT
GTCAGCCACACCGTGCCAATCTACGAAGGTTATGCCCTTCCTCATGCCATCCTGCGTCTT
GACCTTGCTGGGCGTGACCTGACTGACAGCCTGATGAAGATCCTCACCGAGAGAGGTTAC
TCCTTCACCACCACGGCCGAACGGGAAATCGTACGGGACATCAAGGAAAAGCTTGCATAC
GTGGCTCTTGACTATGATCAGGAGCTGGAGAACGCCAAGAGCAGCTCATCTGTGGAGAAG
AGCTACGAGCTGCCTGATGGCCAGGTGATCACCATTGGGGCGGAGAGGTTCCGATGCCCC
GAGGTCCTCTTCCAGCCTTCCTTCATTGGTATGGAAGCTCCTGGCATCCATGAGACCACC
TACAACTCCATCATGAAATGCGACGTGGATATCAGGAAGGACTTGTATGGTAACATTGTT
CTCAGTGGTGGCACAACCATGTTCCCTGGCATCGCTGACCGTATGAGCAAGGAGATCACC
GCCCTTGCCCCGAGCAGCATGAAAATCAAGGTGGTGGCTCCACCCGAGAGGAAATACAGT
GTCTGGATAGGAGGGTCCATCCTTGCCTCCCTGAGCACCTTCCAACAGATGTGGATCTCA
AAGGCTGAGTACGATGAGTCAGGACCAGCGATTGTTCACCGGAAGTGCTTCTAA

Peptide Sequence

PEP ID

Zm00001d053177_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:4:218290860:218293089:1 gene:Zm00001d053177 transcript:Zm00001d053177_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Actin-7
Sequence

MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
DLAGRDLTDSLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYDQELENAKSSSSVEK
SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV
LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS
KAEYDESGPAIVHRKCF

Transcript Sequence

Transcript ID

Zm00001d053177_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:218290860:218293089:1 gene:Zm00001d053177 gene_biotype:protein_coding transcript_biotype:protein_coding description:Actin-7
Sequence

TTTGTCCATCTTGCCTCGCAAGGATAACCGCCCGCTAGTGCGTTTGTATTTGTTTGATTT
CTGAAATATTCGATTTGGAGTGTCATTAACTGCCCTCGTAACGTGTTTTGACTGCAGAAA
CTGTGCCTGTTCTGTAGATTTAGATGAATCACAGTGTTGAGACAAGATTCATCTGAATCC
TTTTGTTAAATTAGAAAATAGAGATGATCCAAGGTCCTGTGCTGAAAATGCAGCTAATAC
CAAACTTGCTGTTTCCTATTGAGATAGATATTCTGTTACTTATCCTTTGTCTCCTCGTGT
TTTTGTTCCAGCATCATCAGTAACAAATGGCTGACGGTGAGGACATTCAGCCCCTTGTTT
GTGACAATGGAACTGGCATGGTCAAGGCTGGTTTTGCTGGTGACGATGCGCCAAGGGCTG
TTTTCCCAAGCATTGTCGGACGCCCCCGTCACACTGGTGTGATGGTTGGCATGGGGCAGA
AGGATGCGTATGTTGGTGACGAGGCCCAGTCCAAGAGGGGTATCCTGACTTTGAAGTACC
CCATCGAACATGGTATTGTTAGCAATTGGGATGACATGGAGAAGATCTGGCACCACACCT
TCTATAATGAACTCCGTGTGGCGCCTGAAGAGCACCCTGTGCTGCTGACGGAAGCCCCAC
TCAACCCCAAAGCTAACAGGGAGAAGATGACCCAAATCATGTTTGAGACCTTCAATGTTC
CTGCCATGTATGTCGCCATCCAGGCTGTGCTTTCCCTGTACGCCAGTGGGCGTACAACTG
GTATTGTGTTGGACTCTGGTGATGGTGTCAGCCACACCGTGCCAATCTACGAAGGTTATG
CCCTTCCTCATGCCATCCTGCGTCTTGACCTTGCTGGGCGTGACCTGACTGACAGCCTGA
TGAAGATCCTCACCGAGAGAGGTTACTCCTTCACCACCACGGCCGAACGGGAAATCGTAC
GGGACATCAAGGAAAAGCTTGCATACGTGGCTCTTGACTATGATCAGGAGCTGGAGAACG
CCAAGAGCAGCTCATCTGTGGAGAAGAGCTACGAGCTGCCTGATGGCCAGGTGATCACCA
TTGGGGCGGAGAGGTTCCGATGCCCCGAGGTCCTCTTCCAGCCTTCCTTCATTGGTATGG
AAGCTCCTGGCATCCATGAGACCACCTACAACTCCATCATGAAATGCGACGTGGATATCA
GGAAGGACTTGTATGGTAACATTGTTCTCAGTGGTGGCACAACCATGTTCCCTGGCATCG
CTGACCGTATGAGCAAGGAGATCACCGCCCTTGCCCCGAGCAGCATGAAAATCAAGGTGG
TGGCTCCACCCGAGAGGAAATACAGTGTCTGGATAGGAGGGTCCATCCTTGCCTCCCTGA
GCACCTTCCAACAGATGTGGATCTCAAAGGCTGAGTACGATGAGTCAGGACCAGCGATTG
TTCACCGGAAGTGCTTCTAAGCTCAAGGGCCCCCTTCGTCCCCATTCTATGTATTCCTTT
CCTTGAGTGCTTTTCTTATAAGCTACTATGTTTGAGATTGCCGGCCTTTGAGCAGGCAAT
GTTGTTGGATCTGTATCTTGTGGATCACTACAATGCATGCGTTGCTCCATCTTCTTTTCA
TGCCAAGTTTGCTGTCATACTTGCTAGTGGGGAAAACAACAATGACAACAGTGGTGAGAA
CAGCAACCACAAAAAAAGAGAGGATGGAAATTATTGAAGTTCCTAGGATCGTATTGTAAC
TGTACTTGTGCGAGTAACATTATTGGTTCTCTTTGTATATCCATCTCTGAGACATGCAAT
TCTTTTTGATTGGTTTGCTACTTCTGTGAATGATTTCTGGGCACTAGTGGAGCTTTTGAA
TGGCAACTTCCCAGGGACTACCTTTGTGAGTCCCCACT