Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053173_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:4:218017497:218020855:-1 gene:Zm00001d053173 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13e description:Autophagy-related protein 13b
Sequence	ATGGCTGTGGCTGCCGGCGTGTCGGAACCACCAATTGTGGAGCAAGTGATCACTGAATTC TTTGCCAAGAGCCTCCACATCATCCTGGAGTCGCGCTCACCCTACGACTCATCGCGGAAC TTCATACGACCCTCCCCACCGTCGTCACCACTGGCTGGCAGCCAGCCGCGTGACCGGTGG TTCAATCTTGCTCTCCGGGACTGCCCTGCCGCACTTGAGAATTTTGACCTATGGAGACAG AGCAACCTTGAGCCTCTGGTCATTGACATTGTCCTCCTTCAACGTGACAATACCAAAACC ACCAGTGTCGGGGCCAGCAGGATCATTGAGAGGTGGATAATAAAGTATGAAACTAGCAGA TCTGGAAATATTATCAAGAACAGTGGCAAGAAAGCTAGAAGCGGCTCTTCTCAGGATCAT AGCTTGTACAGGAGGGCATACAGTGGGTCAACAGTGTTATTCCGGTCATTATATCTGGTT GTCAGGCTCTTGCCAGCATACCATCTTTTTCAGGAGCTCAATTCATCTGGAAGGATCTGT CCCTTGAACCTCTCACACAAGATTTCATCATTTGTTGAGCCATTCACCCGCGCAGAGGAC GCAGAGATGAAACACTATGCATTTGCTCCGATTGAAACTCTGTTTGGTTCCTTAAGCTTG TCAGTTTCGTATGTGCCAGTGCTGGACTTGGCTGCAGTACCAGAGCAATCCTCACCGATG CCACCAGAGCTTATAAAGGATTATGTTGGAAGCCCCACAACAGATTTTCTTAGGAAGCTT GATTCCCTACCTTCAGATGGCATTGCACCTGGATGTTTTCCAATGACCAGGAGGCACAGT TGGAGCACTGAGCATGGAGTTAGACAGTCGGCATCACCATTTCCTATGAGTTCAGAACCC CATGGATGCCTACAGCCACGTATGCCTACTGATAATTCTCCAACAGCATACTCACATCCA CATAACACACCATCATCTGGGAAGGAGAGAAATACAGTAAATGAAGAGTATTATCCATCA CCACCTCTATCACCATCACCATCCCATTCGCCTTCTAGCTACCCAAGAAATCCTTTCTTC CGATATGAGAGTCCTCCTTCAAGTATTCCCACAGTGATGGCCGGTGGAGGTTGTAGCAGA CTGCCTCCTTCTCCACGTAGGAATGATAAGCAACAATGCTCATCTCAAAATGAGAATTTG TCACATTCTCCCAACAATAAATCAATAGTATCAAAGGATCTGGTCAAGCTTAGTGGGTTT CGGAATGAGAAGTCTTTGCAAAAGGTTTTATCTTTTAGTAATGATGATTTGGTGTATTTT CGTGGACTAAAGTTGACCCGTACCTCCAGCAAACTTTTCATCATGGATGAGCTGGATGAG CGGGAGTTGGTTTTTGCATGGGAAGATAAAGACACCATCATTGATCAGCTTAACAGGGTT GATCTTTCTGACAGGGAGGACCATGAGTCGAGTCAGGATCTTGGAGGCTCGTTAACGAGG TCTCCAGATGCAGCAATCGGTATTCTCATGCGCATCCTAAAGAACGCTCCAGGCCTCAGG GAAAGGCTACTGACAGGCCCTAGCGCCCCGGTTCCTCAAGAACCTTCTTCACTCCAGAGG GTAATGACCGAGGAACATGGCAGCGGCGCATCAAGCTCTGCAGGGGTGCCTTCTTCTCTT CTGAGGTCAAGGACAGCGGCGGACACGCTGGAGGAGCTGAACAAGTACAAGGAGATTAGA GAATCAATACTGAACCGCGACAAAGGGCATTCCTGCAGCACCAAGCTGCTGGAGGAGAAA CCCGCGGATGGAGATCGGTAG

Peptide Sequence

PEP ID	Zm00001d053173_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:4:218017497:218020855:-1 gene:Zm00001d053173 transcript:Zm00001d053173_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13e description:Autophagy-related protein 13b
Sequence	MAVAAGVSEPPIVEQVITEFFAKSLHIILESRSPYDSSRNFIRPSPPSSPLAGSQPRDRW FNLALRDCPAALENFDLWRQSNLEPLVIDIVLLQRDNTKTTSVGASRIIERWIIKYETSR SGNIIKNSGKKARSGSSQDHSLYRRAYSGSTVLFRSLYLVVRLLPAYHLFQELNSSGRIC PLNLSHKISSFVEPFTRAEDAEMKHYAFAPIETLFGSLSLSVSYVPVLDLAAVPEQSSPM PPELIKDYVGSPTTDFLRKLDSLPSDGIAPGCFPMTRRHSWSTEHGVRQSASPFPMSSEP HGCLQPRMPTDNSPTAYSHPHNTPSSGKERNTVNEEYYPSPPLSPSPSHSPSSYPRNPFF RYESPPSSIPTVMAGGGCSRLPPSPRRNDKQQCSSQNENLSHSPNNKSIVSKDLVKLSGF RNEKSLQKVLSFSNDDLVYFRGLKLTRTSSKLFIMDELDERELVFAWEDKDTIIDQLNRV DLSDREDHESSQDLGGSLTRSPDAAIGILMRILKNAPGLRERLLTGPSAPVPQEPSSLQR VMTEEHGSGASSSAGVPSSLLRSRTAADTLEELNKYKEIRESILNRDKGHSCSTKLLEEK PADGDR

Transcript Sequence

Transcript ID	Zm00001d053173_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:218017497:218020855:-1 gene:Zm00001d053173 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13e description:Autophagy-related protein 13b
Sequence	GGGCGGCCGCCGCCGCCCAGGTCTTCGTCGGGCCCTTTGCCCGCCACAAGAACCCAGCAC ACCAGACCGGTTCATGCTCTTTATTGGGTCCGCCCCTGCTGTCTGGTGTCGTACTGATTC AGTTCATCCATCCACTTGCAGCCCGATTAGGTTGTTCTTTACGGTTACGGAGCAAGATCC ATTTAGCCATGGTGCTGCCGCAGTTCGCTTTTCAGAAGTTTTGGGTCTTCAATTGAACCC TTGAGTTTAAGTCCGAGCAGCCACACAACCATGGCTGTGGCTGCCGGCGTGTCGGAACCA CCAATTGTGGAGCAAGTGATCACTGAATTCTTTGCCAAGAGCCTCCACATCATCCTGGAG TCGCGCTCACCCTACGACTCATCGCGGAACTTCATACGACCCTCCCCACCGTCGTCACCA CTGGCTGGCAGCCAGCCGCGTGACCGGTGGTTCAATCTTGCTCTCCGGGACTGCCCTGCC GCACTTGAGAATTTTGACCTATGGAGACAGAGCAACCTTGAGCCTCTGGTCATTGACATT GTCCTCCTTCAACGTGACAATACCAAAACCACCAGTGTCGGGGCCAGCAGGATCATTGAG AGGTGGATAATAAAGTATGAAACTAGCAGATCTGGAAATATTATCAAGAACAGTGGCAAG AAAGCTAGAAGCGGCTCTTCTCAGGATCATAGCTTGTACAGGAGGGCATACAGTGGGTCA ACAGTGTTATTCCGGTCATTATATCTGGTTGTCAGGCTCTTGCCAGCATACCATCTTTTT CAGGAGCTCAATTCATCTGGAAGGATCTGTCCCTTGAACCTCTCACACAAGATTTCATCA TTTGTTGAGCCATTCACCCGCGCAGAGGACGCAGAGATGAAACACTATGCATTTGCTCCG ATTGAAACTCTGTTTGGTTCCTTAAGCTTGTCAGTTTCGTATGTGCCAGTGCTGGACTTG GCTGCAGTACCAGAGCAATCCTCACCGATGCCACCAGAGCTTATAAAGGATTATGTTGGA AGCCCCACAACAGATTTTCTTAGGAAGCTTGATTCCCTACCTTCAGATGGCATTGCACCT GGATGTTTTCCAATGACCAGGAGGCACAGTTGGAGCACTGAGCATGGAGTTAGACAGTCG GCATCACCATTTCCTATGAGTTCAGAACCCCATGGATGCCTACAGCCACGTATGCCTACT GATAATTCTCCAACAGCATACTCACATCCACATAACACACCATCATCTGGGAAGGAGAGA AATACAGTAAATGAAGAGTATTATCCATCACCACCTCTATCACCATCACCATCCCATTCG CCTTCTAGCTACCCAAGAAATCCTTTCTTCCGATATGAGAGTCCTCCTTCAAGTATTCCC ACAGTGATGGCCGGTGGAGGTTGTAGCAGACTGCCTCCTTCTCCACGTAGGAATGATAAG CAACAATGCTCATCTCAAAATGAGAATTTGTCACATTCTCCCAACAATAAATCAATAGTA TCAAAGGATCTGGTCAAGCTTAGTGGGTTTCGGAATGAGAAGTCTTTGCAAAAGGTTTTA TCTTTTAGTAATGATGATTTGGTGTATTTTCGTGGACTAAAGTTGACCCGTACCTCCAGC AAACTTTTCATCATGGATGAGCTGGATGAGCGGGAGTTGGTTTTTGCATGGGAAGATAAA GACACCATCATTGATCAGCTTAACAGGGTTGATCTTTCTGACAGGGAGGACCATGAGTCG AGTCAGGATCTTGGAGGCTCGTTAACGAGGTCTCCAGATGCAGCAATCGGTATTCTCATG CGCATCCTAAAGAACGCTCCAGGCCTCAGGGAAAGGCTACTGACAGGCCCTAGCGCCCCG GTTCCTCAAGAACCTTCTTCACTCCAGAGGGTAATGACCGAGGAACATGGCAGCGGCGCA TCAAGCTCTGCAGGGGTGCCTTCTTCTCTTCTGAGGTCAAGGACAGCGGCGGACACGCTG GAGGAGCTGAACAAGTACAAGGAGATTAGAGAATCAATACTGAACCGCGACAAAGGGCAT TCCTGCAGCACCAAGCTGCTGGAGGAGAAACCCGCGGATGGAGATCGGTAGCAATATACG AAAGCCTGCTGTACATAAGTAGTAGAAGCTAGCTGACCGTCCTTAAGTTGCTGGTGTCTG CTGAGATGATTTTGGAAACTAGGTAGCTGTTAGGAGTGACCAATAACTCTTATATATTTA CATGATACTATATATATAAGGTATGGAAGACATATGTGCCCTGAGATGATGACCCACTTG CTGGGTTGTGTAAAGTCGAGATGTTT