Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053155_T016
CDS Infomation

cds chromosome:B73_RefGen_v4:4:216733286:216760086:-1 gene:Zm00001d053155 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-associated domain;Phox-like;Sorting nexin C-terminal
Sequence

ATGCGGAAGAGGATGGAGAGCGTCGACGATCTGATCGAGGAGGCAAAGCTGCGCACCGTC
TGGTGGGCGCTCTGCATCTTCGCCGTCTCCTACTTCCTCACGCATACAAGTAAATCAATG
TGGACAAATGTGCCCATGTCAATCCTTATACTTGCATTTCTGCGATATCTCTCCTTCAAA
GTGGAGTTCCGTTGGAGGGAACACCCTGTACGTAAGCAGACACATTTGTCTCAAGCCTCA
AAGAGACAGTTGTCTGCAAATGATCATCGCCTTTCGACTGTACCACCAGTCTCCAGATGG
AGAAGGAAAGTTGGTTCACCTTCTGTTGAGGCTGCTTTTGAAAGTTTCATTGAGAAAATT
TTACGAGACTTTGTTTTAGACTTGTGGTACTCAGATATTACTCCCGACAGAGAGGCACCA
GAACTGATACGTGGCTTAGTACTTCATGCTCTTGGTGAATTATCAGGCAGGGTGAAAGAG
ATGAATCTAGTTGACATGCTAACAAGGGATATGGTTGATTTGATTGGTAATCATTTAGAT
ATTTTTCGGAAAAATGAAATTCTAATTGGCGTTGATGTCATGAGGACTTTGTCTTCAGAG
GAAATAGATGAGAGACTGAAGCAGCACCTAATAGTTTCACAGGAACTTCATCCAGCACTG
TTATCTTCAGAGCATGAGTACAAGGTTCTTCAAGAAATTGTTGGGGGCATTATGGCTCTA
GTGTTGAGACCACAGGATGCTCAGAGTCCGCTAGTTCGCTGTTTCTCCAGGGAATTGATG
ACCTGCCTAATCTTGCAGCCTGTTATGAACTTCGCAAGCCCTGTCTACATCAATGAGTTG
GTTGTCTACCTTCTAAATGCCAAAGATACAGGTAGCGCTGGAGGTACAAACATGGCTAAT
ACAGGAACAGTAACACTAGTGCCTTACAAAGGAGGCTCACAAGGTTGTCAAATGGAATCA
AGGAATTTGACTGTAGAAACTAGCGGTTTAGTTCCACCAAATAATTCTGGGATGAGATCA
CTTGTTACTTCTGAATGTGGAAAGTCAAAAGTGTCAGAGGATGACAATGATGGTACCATC
CAACCTCGTCAGCCAGACTGGGCGGCGGTATTGGATGCAGCTACTAAAAGAAGGTCAGAG
GTTCTTGCCCCTGAGAATCTTGAGAACATGTGGGCAATTGGAAGAAATTATCAAAAGAAA
ATGGTTAAATTAGACCACTCATCAAGACAGAAAGGCTCTGAAGGTTCAGATAATAGTACA
AGTGCAGGGGCAGTTGGTAAAGAGCTATCCTCTAACTTCAACGACAGAATTGCATCTGTT
GATGATAAATACATGGTCAATTTGATGCAAAGTAAAAATAGGAATGCTCAATCTACCTTC
GTCACAGGTAGTCATCCACTTGCTCTACAAAATATGAATGAAGTGAAACCAAAAGAGGGG
AGTCAAGTTAATTTTACCAGCAAGGAAAAACCACATGAAACCAGCAACAGAGTAAAAGCC
CAACTAAAACGGTGTAATAGTACTCCTGATATTGAGAAAAGATATTTGGCAAAAAGTAAC
CAGCCCATGGTTTCCAGTGAAAGGCTAAATGTGAGGATAAATCAGGATGAGAGAGGTGTT
GGTCCTGCCTCACATGTTGAGGTGCTAATGCATGTTCCGAAGATAAGATGTCGGGTTGTT
GGTGCATATTTTGAGAAACAAGGTTCAAAATCTTTTGCAGTTTATTCTATTGTGGTGACT
GATGCGGATAACAAGAGCTGGTTTGTGAAAAGAAGATACCGGAATTTTGAACGTCTTCAT
CGACAACTGAAGGAGATACCTAATTATTCATTACATCTGCCTCCAAAGAGTTTTCTTTCA
TCTAGCGTTGATGATTATCTTGTGCACCAACGGTGCATTCTCCTGGACAAATATCTTCAA
GATCTCTTGTCTATAGCTAATATTGCAGAGCAGCATGAAGTTTTGGATTTTCTGAGTGCA
TCCTCAAAGACTTACTCTGCTGGAAAGTCCTCCTCTGTTATGAAAACCTTGGCTGTTAAT
GTTGATGATGCAATGGATGACATTGTTCGACAATTTAAAGGAGTTTCAGATGGTTTGAAA
CGGGCGGTCGGCACATCACCTTCTAGTGCAACTGCCCAATTTGCAGATAATAGGATGTCT
CTATCTTGGAACCAGGAAGAGAAAGATAACCACAACTTGCATCAAAGAAACTTGGAAAGG
GCTCATAGCCTTTCAGATGGTGATAGTAACTATGAAGATCACATCTCTTCTGTGAATAGT
GGATGCCATTCAGACAATGAGGTCAATAATAGAGGACATACTTCAAATGATGTTGAGCAC
ATCGAAACATGCTCTAGTTTGGATAAACAAGCCAGCGACCAAATAGGAAAACCTGCAAAG
GAATATTCTGATTCTTCAAACATGTCATCTCTAAATGCATTTGAGGATCCAACAGGAATT
CCTCCTGAGTGGATGCCAACAAATGTTAGTGTGCCTTTATTGAACCTGGTTGACAAAGTA
TTCCAGCTAAAGCGACGGGGTTGGATACGGAGACAGGTTCTTTGGATATCAAAACAAATT
TTGCAGTTGGTCATGGAAGATGCAATTGATGAATGGATCATAAGACAAATCAATTGGCTC
CGAAGAGAAGATGTCATCGTACAAGGAATACATTGGATTCAAGATACCCTTTGGCCAAAT
GGTATATTCTTCACCAAGTTGGATGAATATAAAGGGAATGCAGGCACAAGTGAATTTGAC
AAGCAGTCATTAGGGAGTCCCACACTGGCTGTTGGCAATAAAAAGGGCCGCACAAGCTCT
TTTGAACTTCATCTTGAGGCATCCAGAAATGCCAGTGAGGTCAAAAAACTTATTTTAGAT
GGAACTCCATCGGCCTTGGTCAGCATAATTGGATACAAGCAGTACCGGCGCAGCGCAAGG
GACATGTACTACTTCCTCCAATCCAACGTCTGCATCAAACAGCTCGCATATGCAATGCTA
GAGCAGGTCCTCGTGACAGTCTTCCCAGAGCTTCGCCAGCTAATAGAAGACATACATGAG
AAAGGCCGCAAAGAGCAAGCCTCATTCACATACCAACTCTGA

Peptide Sequence

PEP ID

Zm00001d053155_P016
PEP Infomation

pep chromosome:B73_RefGen_v4:4:216733286:216760086:-1 gene:Zm00001d053155 transcript:Zm00001d053155_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-associated domain;Phox-like;Sorting nexin C-terminal
Sequence

MRKRMESVDDLIEEAKLRTVWWALCIFAVSYFLTHTSKSMWTNVPMSILILAFLRYLSFK
VEFRWREHPVRKQTHLSQASKRQLSANDHRLSTVPPVSRWRRKVGSPSVEAAFESFIEKI
LRDFVLDLWYSDITPDREAPELIRGLVLHALGELSGRVKEMNLVDMLTRDMVDLIGNHLD
IFRKNEILIGVDVMRTLSSEEIDERLKQHLIVSQELHPALLSSEHEYKVLQEIVGGIMAL
VLRPQDAQSPLVRCFSRELMTCLILQPVMNFASPVYINELVVYLLNAKDTGSAGGTNMAN
TGTVTLVPYKGGSQGCQMESRNLTVETSGLVPPNNSGMRSLVTSECGKSKVSEDDNDGTI
QPRQPDWAAVLDAATKRRSEVLAPENLENMWAIGRNYQKKMVKLDHSSRQKGSEGSDNST
SAGAVGKELSSNFNDRIASVDDKYMVNLMQSKNRNAQSTFVTGSHPLALQNMNEVKPKEG
SQVNFTSKEKPHETSNRVKAQLKRCNSTPDIEKRYLAKSNQPMVSSERLNVRINQDERGV
GPASHVEVLMHVPKIRCRVVGAYFEKQGSKSFAVYSIVVTDADNKSWFVKRRYRNFERLH
RQLKEIPNYSLHLPPKSFLSSSVDDYLVHQRCILLDKYLQDLLSIANIAEQHEVLDFLSA
SSKTYSAGKSSSVMKTLAVNVDDAMDDIVRQFKGVSDGLKRAVGTSPSSATAQFADNRMS
LSWNQEEKDNHNLHQRNLERAHSLSDGDSNYEDHISSVNSGCHSDNEVNNRGHTSNDVEH
IETCSSLDKQASDQIGKPAKEYSDSSNMSSLNAFEDPTGIPPEWMPTNVSVPLLNLVDKV
FQLKRRGWIRRQVLWISKQILQLVMEDAIDEWIIRQINWLRREDVIVQGIHWIQDTLWPN
GIFFTKLDEYKGNAGTSEFDKQSLGSPTLAVGNKKGRTSSFELHLEASRNASEVKKLILD
GTPSALVSIIGYKQYRRSARDMYYFLQSNVCIKQLAYAMLEQVLVTVFPELRQLIEDIHE
KGRKEQASFTYQL

Transcript Sequence

Transcript ID

Zm00001d053155_T016
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:216733286:216760086:-1 gene:Zm00001d053155 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox-associated domain;Phox-like;Sorting nexin C-terminal
Sequence

AAAATAACCCAGAAATAAAAATCGCCGTGGAGGCGAGTCGCCGCCGGCACCGCCCGGCAC
GGCCTTCTTCTCCGGCGAAGGCGGAGCTCGTTACGGGGATTCCGCATCCGTTAATCGGTC
CCACCGGATCCCTCGCCGCCTCCCACGGGCCGGGCCGCGCCGTGGCGCGCGCGCAGGCCG
AGATGCGGAAGAGGATGGAGAGCGTCGACGATCTGATCGAGGAGGCAAAGCTGCGCACCG
TCTGGTGGGCGCTCTGCATCTTCGCCGTCTCCTACTTCCTCACGCATACAAGTAAATCAA
TGTGGACAAATGTGCCCATGTCAATCCTTATACTTGCATTTCTGCGATATCTCTCCTTCA
AAGTGGAGTTCCGTTGGAGGGAACACCCTGTACGTAAGCAGACACATTTGTCTCAAGCCT
CAAAGAGACAGTTGTCTGCAAATGATCATCGCCTTTCGACTGTACCACCAGTCTCCAGAT
GGAGAAGGAAAGTTGGTTCACCTTCTGTTGAGGCTGCTTTTGAAAGTTTCATTGAGAAAA
TTTTACGAGACTTTGTTTTAGACTTGTGGTACTCAGATATTACTCCCGACAGAGAGGCAC
CAGAACTGATACGTGGCTTAGTACTTCATGCTCTTGGTGAATTATCAGGCAGGGTGAAAG
AGATGAATCTAGTTGACATGCTAACAAGGGATATGGTTGATTTGATTGGTAATCATTTAG
ATATTTTTCGGAAAAATGAAATTCTAATTGGCGTTGATGTCATGAGGACTTTGTCTTCAG
AGGAAATAGATGAGAGACTGAAGCAGCACCTAATAGTTTCACAGGAACTTCATCCAGCAC
TGTTATCTTCAGAGCATGAGTACAAGGTTCTTCAAGAAATTGTTGGGGGCATTATGGCTC
TAGTGTTGAGACCACAGGATGCTCAGAGTCCGCTAGTTCGCTGTTTCTCCAGGGAATTGA
TGACCTGCCTAATCTTGCAGCCTGTTATGAACTTCGCAAGCCCTGTCTACATCAATGAGT
TGGTTGTCTACCTTCTAAATGCCAAAGATACAGGTAGCGCTGGAGGTACAAACATGGCTA
ATACAGGAACAGTAACACTAGTGCCTTACAAAGGAGGCTCACAAGGTTGTCAAATGGAAT
CAAGGAATTTGACTGTAGAAACTAGCGGTTTAGTTCCACCAAATAATTCTGGGATGAGAT
CACTTGTTACTTCTGAATGTGGAAAGTCAAAAGTGTCAGAGGATGACAATGATGGTACCA
TCCAACCTCGTCAGCCAGACTGGGCGGCGGTATTGGATGCAGCTACTAAAAGAAGGTCAG
AGGTTCTTGCCCCTGAGAATCTTGAGAACATGTGGGCAATTGGAAGAAATTATCAAAAGA
AAATGGTTAAATTAGACCACTCATCAAGACAGAAAGGCTCTGAAGGTTCAGATAATAGTA
CAAGTGCAGGGGCAGTTGGTAAAGAGCTATCCTCTAACTTCAACGACAGAATTGCATCTG
TTGATGATAAATACATGGTCAATTTGATGCAAAGTAAAAATAGGAATGCTCAATCTACCT
TCGTCACAGGTAGTCATCCACTTGCTCTACAAAATATGAATGAAGTGAAACCAAAAGAGG
GGAGTCAAGTTAATTTTACCAGCAAGGAAAAACCACATGAAACCAGCAACAGAGTAAAAG
CCCAACTAAAACGGTGTAATAGTACTCCTGATATTGAGAAAAGATATTTGGCAAAAAGTA
ACCAGCCCATGGTTTCCAGTGAAAGGCTAAATGTGAGGATAAATCAGGATGAGAGAGGTG
TTGGTCCTGCCTCACATGTTGAGGTGCTAATGCATGTTCCGAAGATAAGATGTCGGGTTG
TTGGTGCATATTTTGAGAAACAAGGTTCAAAATCTTTTGCAGTTTATTCTATTGTGGTGA
CTGATGCGGATAACAAGAGCTGGTTTGTGAAAAGAAGATACCGGAATTTTGAACGTCTTC
ATCGACAACTGAAGGAGATACCTAATTATTCATTACATCTGCCTCCAAAGAGTTTTCTTT
CATCTAGCGTTGATGATTATCTTGTGCACCAACGGTGCATTCTCCTGGACAAATATCTTC
AAGATCTCTTGTCTATAGCTAATATTGCAGAGCAGCATGAAGTTTTGGATTTTCTGAGTG
CATCCTCAAAGACTTACTCTGCTGGAAAGTCCTCCTCTGTTATGAAAACCTTGGCTGTTA
ATGTTGATGATGCAATGGATGACATTGTTCGACAATTTAAAGGAGTTTCAGATGGTTTGA
AACGGGCGGTCGGCACATCACCTTCTAGTGCAACTGCCCAATTTGCAGATAATAGGATGT
CTCTATCTTGGAACCAGGAAGAGAAAGATAACCACAACTTGCATCAAAGAAACTTGGAAA
GGGCTCATAGCCTTTCAGATGGTGATAGTAACTATGAAGATCACATCTCTTCTGTGAATA
GTGGATGCCATTCAGACAATGAGGTCAATAATAGAGGACATACTTCAAATGATGTTGAGC
ACATCGAAACATGCTCTAGTTTGGATAAACAAGCCAGCGACCAAATAGGAAAACCTGCAA
AGGAATATTCTGATTCTTCAAACATGTCATCTCTAAATGCATTTGAGGATCCAACAGGAA
TTCCTCCTGAGTGGATGCCAACAAATGTTAGTGTGCCTTTATTGAACCTGGTTGACAAAG
TATTCCAGCTAAAGCGACGGGGTTGGATACGGAGACAGGTTCTTTGGATATCAAAACAAA
TTTTGCAGTTGGTCATGGAAGATGCAATTGATGAATGGATCATAAGACAAATCAATTGGC
TCCGAAGAGAAGATGTCATCGTACAAGGAATACATTGGATTCAAGATACCCTTTGGCCAA
ATGGTATATTCTTCACCAAGTTGGATGAATATAAAGGGAATGCAGGCACAAGTGAATTTG
ACAAGCAGTCATTAGGGAGTCCCACACTGGCTGTTGGCAATAAAAAGGGCCGCACAAGCT
CTTTTGAACTTCATCTTGAGGCATCCAGAAATGCCAGTGAGGTCAAAAAACTTATTTTAG
ATGGAACTCCATCGGCCTTGGTCAGCATAATTGGATACAAGCAGTACCGGCGCAGCGCAA
GGGACATGTACTACTTCCTCCAATCCAACGTCTGCATCAAACAGCTCGCATATGCAATGC
TAGAGCAGGTCCTCGTGACAGTCTTCCCAGAGCTTCGCCAGCTAATAGAAGACATACATG
AGAAAGGCCGCAAAGAGCAAGCCTCATTCACATACCAACTCTGACCCAAGAGAAAACATG
CTAATTCAGAGAGGAGTCGCAACAATTTTGAACGCACTTGCATTGCTCCACGGTGAGTTA
CTGAAACACAAAGCCTTTGCAATTATATTTTGATGATGCATAAGTTGGATTGAGGAAGTG
CTTGGTGCTTAAGAATGATCTGTACAGATGTATATCAGAGGTTATGTAAATTATCCCCCT
GATGTAGTCAACCAGAACAACTTACAG