Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053151_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:216317487:216322672:-1 gene:Zm00001d053151 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 6 description:Putative POX domain/homeobox DNA-binding domain family protein
Sequence	ATGGCGGCGTACTACCACGGTGGCGCCGGCACGGACATCCAGGCCAGCACCGACGGCCTG CAGACGCTGTACCTCATGAACCCGAGCTACGCCGGCGGCTACGCTGACGACGGCGGCGCG TCCACGCCGGGGGCGGCCAACATGATGCTCCTCAACTCGGCCGTGACCACCATGACGCCG GCGTCCTTCGCGCACCACCACCAGCAGCAGTCGCCGCCGGCCGCGCAGCAGCACTTCGTC GGCATCCCGCTCCAGGTCCAGGCGCCGCCGCCGTCGGGCTACAACCTGTGGACCCCGGCC ATGGCTGGCGGCGCCGCGGACATGTCGCCGCAGGCGCAGGCGCAGACTCCCGGCGCCGCG GGTGCTGCTGGGGTCAGCGCCGTGCTCAGCCTGTCGTCCCGCGAGGCGCCGCCGGTCACC GTGGCCGCGGTGGCCGCCTGCACCGACGAGGGCAAGTACCTGGGCGTGTCGGCCACGCCG CAGGGGCAGATGGTCATGAGCTCCAAGTACCTCAAGGCCGCGCAGGAGCTGCTCGACGAG GTGGTCAGCGTCAGCAAGGGCGTCGAGGACGCTAAGACGGCCGCTGCCGCCGCGACCAAG AGCCTGGCCGCGGTGAAGAAGAAGGAGGACTCGGAGGGCGCGTCAGGTGGCGGCACCGAC GACGGTGCCGGCGCAAAGAGCGGCGGTGGTGCCGCGCCAGAGATGTCCACGGCGGAGCGG CAGGAGATGCAGATGAAGAAGAGCAAGCTTCTCAACATGCTTGACGAGGTGGAGCAGCGG TACCGGCAGTACCACGGGCAGATGCAGGCGGTGTCGTCGTCGTTCGAGGCGGCGGCGGGG GCCGGGTCGGCGCGGACGTACACGGCGCTGGCGCTGCGCACCATCTCGCGGCAGTTCCGG TGTCTGCGGGACGCGATCGCGTCGCAGGTGCGCGCGGCGAGCCGGGCGCTGGGCGAGGAC GCGGACGCCGCCGTCGCCGGGGGCCGCACCGTGGGGTCCCGCCTCCGCTACATCGACCAC CAGCTCCGGCAGCAGCGCGCGCTGCAGCAGCTCGGCATGATGCAGGGCGGCGCCTGGCGG CCCCAGCGCGGCCTCCCCGAGCGCTCCGTCTCCATCCTCCGCGCCTGGCTCTTCGAGCAC TTCCTGCACCCATACCCCAAGGATTCGGACAAGATCATGCTCGCCAAGCAAACCGGGCTC ACCAGGAGTCAGGTGTCCAATTGGTTCATCAATGCGAGGGTGCGGCTGTGGAAGCCTATG GTGGAGGAGATGTACCTGGAGGAGACAAAGGACCAGGACGCTGGAGGCGGCGGCAACGAC GAGGGCAAGTCCGGTGGCGGCGGCAGCAAGAGCAGCGACACCGTCGACGGCGTCATGCCG AGGGCGGACGTGATGTCCAAGTCCGCGGTGCGCGTGGGAGGCGGCGGGGCGGGGGCGGAG AGCGCGTCCACCAACAAGGGCATCCATGGCTCCTCCCTGCTCGAGCTCGGCGGCGGCGAT CACCAGCAGTCCCACGCGGGGTTCTACGACGACGATGAAGACGACGGCGACGACGTGATG GGGCGGAGGCTCAAGAAGGCGCGCGGCAACGAGCCGGCGCCGGCGTTCCACCACGTGCAC GACATAGCCACGCTGCACGCGCAGGCCGCGGCGGCCGCGAGGCAGCAGCACGAGGAGGTC AGCCACCGGGAGCTCCTCATGAAGTTCATGGAGAGCGGCGGCGGTGGCGGCGTGAGGGAC CACCACCAGGACGGCGGCGGGTACTCGCTGTTCGCGCCGGGGCCGTACGGGCAGTTCACC ACGGAGCCCTTCGCGTTCGCTGGGAACGGCGGGGTGTCGCTGACGCTCGGCCTCCCGCAC GGCGCCGGAGGCAGCGCCGAGCAGACCGCGTCGTTCCTCATGGGCAGCACCACGGCCGGC GACAGCGGCAGCCACGGCGCCGCCACCAGCTACGACATGAACATGCAGAGCACCAAGTCG TTCGCGGCGCAGCTCATGAGGGACTTCGTGGCCTAG

Peptide Sequence

PEP ID	Zm00001d053151_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:216317487:216322672:-1 gene:Zm00001d053151 transcript:Zm00001d053151_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 6 description:Putative POX domain/homeobox DNA-binding domain family protein
Sequence	MAAYYHGGAGTDIQASTDGLQTLYLMNPSYAGGYADDGGASTPGAANMMLLNSAVTTMTP ASFAHHHQQQSPPAAQQHFVGIPLQVQAPPPSGYNLWTPAMAGGAADMSPQAQAQTPGAA GAAGVSAVLSLSSREAPPVTVAAVAACTDEGKYLGVSATPQGQMVMSSKYLKAAQELLDE VVSVSKGVEDAKTAAAAATKSLAAVKKKEDSEGASGGGTDDGAGAKSGGGAAPEMSTAER QEMQMKKSKLLNMLDEVEQRYRQYHGQMQAVSSSFEAAAGAGSARTYTALALRTISRQFR CLRDAIASQVRAASRALGEDADAAVAGGRTVGSRLRYIDHQLRQQRALQQLGMMQGGAWR PQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPM VEEMYLEETKDQDAGGGGNDEGKSGGGGSKSSDTVDGVMPRADVMSKSAVRVGGGGAGAE SASTNKGIHGSSLLELGGGDHQQSHAGFYDDDEDDGDDVMGRRLKKARGNEPAPAFHHVH DIATLHAQAAAAARQQHEEVSHRELLMKFMESGGGGGVRDHHQDGGGYSLFAPGPYGQFT TEPFAFAGNGGVSLTLGLPHGAGGSAEQTASFLMGSTTAGDSGSHGAATSYDMNMQSTKS FAAQLMRDFVA

Transcript Sequence

Transcript ID	Zm00001d053151_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:216317487:216322672:-1 gene:Zm00001d053151 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 6 description:Putative POX domain/homeobox DNA-binding domain family protein
Sequence	AGAGCAAAAGGGAAATAAAGGAGCTCTCGCAGGCACTCGGTACTGACATGAGTGATCTCA TGCTCTTGATACCTTGGTACTCTTACATCACCCCTTCTTCACCTTCTTCTTGTTCTTGCT CATCCCTCCTCTCCGGCCCTCTCTTCCTCCTGCCTCTCTCTAGCTAGGACGATCTTCAAC AACCCTCTCCCCCTCTAATTCTCTTTCCCCATATAGAGAGAATAAAGGAGAGAGAGAGGC GAAGGCAGGCAGCTAATTTTCTTTTGTTCAAGGGAAAGGACAGCACGTGCCGGAGCTCAT AAGCTGGTAGCTGCATCAGTTCCTGAGGCAAAACCACCTGCTTACGATCTTGCAGTCATC ATCACGCTATTAGTTGAGGATAATTTCGCGCACAAGAGCACGACAAGCCGAGATTTTTGG GGGCGTCGGCGTCGACCTGTAGGCGATGGCGGCGTACTACCACGGTGGCGCCGGCACGGA CATCCAGGCCAGCACCGACGGCCTGCAGACGCTGTACCTCATGAACCCGAGCTACGCCGG CGGCTACGCTGACGACGGCGGCGCGTCCACGCCGGGGGCGGCCAACATGATGCTCCTCAA CTCGGCCGTGACCACCATGACGCCGGCGTCCTTCGCGCACCACCACCAGCAGCAGTCGCC GCCGGCCGCGCAGCAGCACTTCGTCGGCATCCCGCTCCAGGTCCAGGCGCCGCCGCCGTC GGGCTACAACCTGTGGACCCCGGCCATGGCTGGCGGCGCCGCGGACATGTCGCCGCAGGC GCAGGCGCAGACTCCCGGCGCCGCGGGTGCTGCTGGGGTCAGCGCCGTGCTCAGCCTGTC GTCCCGCGAGGCGCCGCCGGTCACCGTGGCCGCGGTGGCCGCCTGCACCGACGAGGGCAA GTACCTGGGCGTGTCGGCCACGCCGCAGGGGCAGATGGTCATGAGCTCCAAGTACCTCAA GGCCGCGCAGGAGCTGCTCGACGAGGTGGTCAGCGTCAGCAAGGGCGTCGAGGACGCTAA GACGGCCGCTGCCGCCGCGACCAAGAGCCTGGCCGCGGTGAAGAAGAAGGAGGACTCGGA GGGCGCGTCAGGTGGCGGCACCGACGACGGTGCCGGCGCAAAGAGCGGCGGTGGTGCCGC GCCAGAGATGTCCACGGCGGAGCGGCAGGAGATGCAGATGAAGAAGAGCAAGCTTCTCAA CATGCTTGACGAGGTGGAGCAGCGGTACCGGCAGTACCACGGGCAGATGCAGGCGGTGTC GTCGTCGTTCGAGGCGGCGGCGGGGGCCGGGTCGGCGCGGACGTACACGGCGCTGGCGCT GCGCACCATCTCGCGGCAGTTCCGGTGTCTGCGGGACGCGATCGCGTCGCAGGTGCGCGC GGCGAGCCGGGCGCTGGGCGAGGACGCGGACGCCGCCGTCGCCGGGGGCCGCACCGTGGG GTCCCGCCTCCGCTACATCGACCACCAGCTCCGGCAGCAGCGCGCGCTGCAGCAGCTCGG CATGATGCAGGGCGGCGCCTGGCGGCCCCAGCGCGGCCTCCCCGAGCGCTCCGTCTCCAT CCTCCGCGCCTGGCTCTTCGAGCACTTCCTGCACCCATACCCCAAGGATTCGGACAAGAT CATGCTCGCCAAGCAAACCGGGCTCACCAGGAGTCAGGTGTCCAATTGGTTCATCAATGC GAGGGTGCGGCTGTGGAAGCCTATGGTGGAGGAGATGTACCTGGAGGAGACAAAGGACCA GGACGCTGGAGGCGGCGGCAACGACGAGGGCAAGTCCGGTGGCGGCGGCAGCAAGAGCAG CGACACCGTCGACGGCGTCATGCCGAGGGCGGACGTGATGTCCAAGTCCGCGGTGCGCGT GGGAGGCGGCGGGGCGGGGGCGGAGAGCGCGTCCACCAACAAGGGCATCCATGGCTCCTC CCTGCTCGAGCTCGGCGGCGGCGATCACCAGCAGTCCCACGCGGGGTTCTACGACGACGA TGAAGACGACGGCGACGACGTGATGGGGCGGAGGCTCAAGAAGGCGCGCGGCAACGAGCC GGCGCCGGCGTTCCACCACGTGCACGACATAGCCACGCTGCACGCGCAGGCCGCGGCGGC CGCGAGGCAGCAGCACGAGGAGGTCAGCCACCGGGAGCTCCTCATGAAGTTCATGGAGAG CGGCGGCGGTGGCGGCGTGAGGGACCACCACCAGGACGGCGGCGGGTACTCGCTGTTCGC GCCGGGGCCGTACGGGCAGTTCACCACGGAGCCCTTCGCGTTCGCTGGGAACGGCGGGGT GTCGCTGACGCTCGGCCTCCCGCACGGCGCCGGAGGCAGCGCCGAGCAGACCGCGTCGTT CCTCATGGGCAGCACCACGGCCGGCGACAGCGGCAGCCACGGCGCCGCCACCAGCTACGA CATGAACATGCAGAGCACCAAGTCGTTCGCGGCGCAGCTCATGAGGGACTTCGTGGCCTA GCTCCCTTAGGACGCATAGCATAGCAGTCGTCCACGCAATTAATCAAATCATCTCTCCAT CGATCAATTAATTTAGAGCTTGTATAGAAATAAAGGGTTCAAGCCTAAATATGCTTTGCG TATATAAAGCAGTTAAGCTTGGACTCATAGGTCTTGCTGGGAATGTAAAGATGGGATATA TATCATGGGGCCATGTATATATAGGTATAGGAGGATAGGTAACTAGTTGATACCCAAACA TTGTACAAGATTTTATATGTAGATCATAGGGATTGGGGGGTATACAGTAAAGTATGCGAA AAGGGTATATTGGAACTGGACTTAGTGTATGCTGTAGAAATTGGCCTACTAGTATTATCT GCAGCAATTCAGTATTTGTTTTGCTTACTGTAAACATAGCACATTGTGATTCATTGGCAG CACCATGTGCTGTTAGATGACATTGTGGATAATGCTGCTC