Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053150_T019
CDS Infomation

cds chromosome:B73_RefGen_v4:4:216316063:216317410:1 gene:Zm00001d053150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein

Sequence

ATGCTTTTCTTACAAAGTGTGACGAAGAATGCAGACAAGCTCAAGGACTCTACCGAGTCT
AAGATACTTGGTAGTGAAAATGGCCCCCTTTGGAAAGACTACTTCGAAGGTGGGGCTACC
TGGGCTTTTGATGTCGGCTCTCAGTCTATGACATGTCCAATCATTGTTGAGGATCTTGAC
CGACCTCGTCAGATGCTTGTGGAGATGCTTTGCGAGGATAGAGGAATCTTCTTGGAGATA
GCTGATTTCATCAAAGGACTAGGACTGACTATCTTGAGGGGTGTGATGGAAATGCGCAAA
AGTAAAATCTGGGCACGGTTCACTGTTGAGGCGAACCGGGACGTAACCAGAATGGAGATC
TTTCTATCGCTTGTGCGCTTATTGGAGCCAAACTGTGACGGCAGTGCAGCGGCGGAGAAC
GCTAGCAACATGAACATGCCTCTTGGCTTGGTGCACCAACCTGTCATCCCAGCAACAGGC
AGCATCCAATGA

Peptide Sequence

PEP ID

Zm00001d053150_P019
PEP Infomation

pep chromosome:B73_RefGen_v4:4:216316063:216317410:1 gene:Zm00001d053150 transcript:Zm00001d053150_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein

Sequence

MLFLQSVTKNADKLKDSTESKILGSENGPLWKDYFEGGATWAFDVGSQSMTCPIIVEDLD
RPRQMLVEMLCEDRGIFLEIADFIKGLGLTILRGVMEMRKSKIWARFTVEANRDVTRMEI
FLSLVRLLEPNCDGSAAAENASNMNMPLGLVHQPVIPATGSIQ

Transcript Sequence

Transcript ID

Zm00001d053150_T019
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:216316063:216317410:1 gene:Zm00001d053150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein

Sequence

ATAGTGTAGCATTGATGGTTTGTTGGAGAAGACGGTTAAGCACATGCTTTTCTTACAAAG
TGTGACGAAGAATGCAGACAAGCTCAAGGACTCTACCGAGTCTAAGATACTTGGTAGTGA
AAATGGCCCCCTTTGGAAAGACTACTTCGAAGGTGGGGCTACCTGGGCTTTTGATGTCGG
CTCTCAGTCTATGACATGTCCAATCATTGTTGAGGATCTTGACCGACCTCGTCAGATGCT
TGTGGAGATGCTTTGCGAGGATAGAGGAATCTTCTTGGAGATAGCTGATTTCATCAAAGG
ACTAGGACTGACTATCTTGAGGGGTGTGATGGAAATGCGCAAAAGTAAAATCTGGGCACG
GTTCACTGTTGAGGCGAACCGGGACGTAACCAGAATGGAGATCTTTCTATCGCTTGTGCG
CTTATTGGAGCCAAACTGTGACGGCAGTGCAGCGGCGGAGAACGCTAGCAACATGAACAT
GCCTCTTGGCTTGGTGCACCAACCTGTCATCCCAGCAACAGGCAGCATCCAATGAGACTA
GAGGAAACCCTGAAGCATCTTCCCAAGTGCTAAGAGCAGGAGCTCAACTAACTTCTGCAG
TGACTAGCATCGCCAATATGCCAGTGCATCGCCTGCTTTTCCTGAGACATCTTAATCCGT
GCAAATGTGACATCCTTCATGAGACCAGGTCGCAGAAATGGAAGAAGGAAAACAACGCCA
AGAGTGATTGTTAGGCAGTGTTTTGTTTGTATGATCTTAGTTTGTTTGTTAGTTAGCGCT
GTTTGGTCGTATATTAGCGGATTTTTTTGGTACTGTTATTCAGAATGGAAATTCTTGGGT
TGGTTTATTTCACACCAAAAAAGAGAGATGGAATACCACCTTTGTTATAAATCTTCTCAC
ATCAGAACCAGTTAGCATGACTAGTGGAAAAACACCTGAGCAGATTTGTCATTGCTCCG