Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053150_T018
CDS Infomation	cds chromosome:B73_RefGen_v4:4:216314331:216317295:1 gene:Zm00001d053150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein
Sequence	ATGGAAAACATAAATTTTGTGATGTTTGCAAAGAAGTTGTGTTCTCAGCTAAACAACCGT TCAAGCATGGCTGCATCTGCTTCGGCTAAAAACGCTTTAAGTCAGCATGGCCAGTCACGT CCTGATACTGCAACTGTGTCAACTAGGACACCACCAAATGCATTGCTGAATGCATCTTTG CTTAAGGTTGCACAACAGAGTGGTCACCCTGTTAGAGAGCACGTTGTCTATGCTGAGCCT GACCTTAGGTTTAGACAACAAGCATCCTTCTGCGAGAACCAATTTGGAAGTAATTTACAG AGTGTTGTTATGAACTCAAGTTTGACCTCCCCAAGCTTGGCATCAGTTAAAAAGCAGCCA CTCTTGATGAACAGCATTGGGCAGTTACAGTTCAGTAATTATGTGCATTCATCGGCAGAT TTGGCAAGAGATGTCATATTAAAATCCCTTGTGCGCCAGGACTCTTCTGTCTGCGAAACT ACAAACATGAATATGCATCGTGGAAGATATATGGTATCCAATGATATAAATGGTTCTGGG GATTTTGATTTTCTCCCTGTAGGTGCCAAAGCAAGCAGAGCCAACTTATCAACCAGTGTG TCGAGTCAAATATTGGACCACACAACAAGAACACTGCAGCAAAAACAGTCTCTTGTCCCA TTCAAAGTCACCCAATCTTCTGAATTCAATAAGAAAATGGAGAACCCTGAAAATGGATCA TTTCAAACCCCTTCAGTTCCAACTTCTGAATCTGGTGGTCAGGTTTCTAACAGTTTCAAC ATGGACCAAGAGAATCAATTGATTATGTCAAACAATGTACGGCAAGTTCAAAAGATTAAT AGATTTAGTGATCCAAGTGCTAATGTAAGCACTCAGAGAATGAAGAACAGGGATGTATGC GAGTCGGGAATGCCCATTGAGAGAGGTTCCTCGTTGCTAGTGGAGCCTGGTGCAGATAAT GACTTGTTTGATATGCTTGGTTCTGAATTTCATCAGTTCTCCCACAACGTTGGGTCTGAT TTGGTCACCTGGAGTGGTACAGAGTCTCAGAATTCAGATAGAGATGGCCCTGAATCATCA ATATATCTCAATAGCTCACCCCTTTTCAGTTCGTTAGACAACGAGCTTCACTATTCTGGT ATCTTATCACTAACTGATACTGATCAACTATTGGATGCTGTCATCTCAAATGTCAATCCA AGTAGTAAACAGTGTCCTGATGATAGTGCTTCTTGCAAGACTGCATTGACGGATGTTCCT AGCACATCTCATCTTGGTTCAATAGACTTGAAGAGATGTGAGTCCTCCGGCGTTCCTTCA GTGCTAATTAAGCACGAATTGGCACAGCTTGTTAAGCAACCATGTATTTTTGACAAATCT GAGAACTGTCTTTCCCAAAATAATGGAATGCACAAGTCTCAGATACGCCTTTGGATTGAG AGTGGTCAGAACATGAAATGTGAAAGTACTTCAGCTTCTAACAGCAAAGGTCTTGATACG CCAAGCAAGGCGAATCGCAAGAGATCTCGACCCGGTGAAAGTGCTAAGCCACGACCTAAG GACCGGCAGCTGATACAGGACCGTATTAAAGAGCTTCGTGAGCTTGTACCGAATGGGGCA AAGTGTAGCATTGATGGTTTGTTGGAGAAGACGGTTAAGCACATGCTTTTCTTACAAAGT GTGACGAAGAATGCAGACAAGCTCAAGGACTCTACCGAGTCTAAGATACTTGGTAGTGAA AATGGCCCCCTTTGGAAAGACTACTTCGAAGGTGGGGCTACCTGGGCTTTTGATGTCGGC TCTCAGTCTATGACATGTCCAATCATTGTTGAGGATCTTGACCGACCTCGTCAGATGCTT GTGGAGATGCTTTGCGAGGATAGAGGAATCTTCTTGGAGATAGCTGATTTCATCAAAGGA CTAGGACTGACTATCTTGAGGGGTGTGATGGAAATGCGCAAAAGTAAAATCTGGGCACGG TTCACTGTTGAGGCGAACCGGGACGTAACCAGAATGGAGATCTTTCTATCGCTTGTGCGC TTATTGGAGCCAAACTGTGACGGCAGTGCAGCGGCGGAGAACGCTAGCAACATGAACATG CCTCTTGGCTTGGTGCACCAACCTGTCATCCCAGCAACAGGCAGCATCCAATGA

Peptide Sequence

PEP ID	Zm00001d053150_P018
PEP Infomation	pep chromosome:B73_RefGen_v4:4:216314331:216317295:1 gene:Zm00001d053150 transcript:Zm00001d053150_T018 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein
Sequence	MENINFVMFAKKLCSQLNNRSSMAASASAKNALSQHGQSRPDTATVSTRTPPNALLNASL LKVAQQSGHPVREHVVYAEPDLRFRQQASFCENQFGSNLQSVVMNSSLTSPSLASVKKQP LLMNSIGQLQFSNYVHSSADLARDVILKSLVRQDSSVCETTNMNMHRGRYMVSNDINGSG DFDFLPVGAKASRANLSTSVSSQILDHTTRTLQQKQSLVPFKVTQSSEFNKKMENPENGS FQTPSVPTSESGGQVSNSFNMDQENQLIMSNNVRQVQKINRFSDPSANVSTQRMKNRDVC ESGMPIERGSSLLVEPGADNDLFDMLGSEFHQFSHNVGSDLVTWSGTESQNSDRDGPESS IYLNSSPLFSSLDNELHYSGILSLTDTDQLLDAVISNVNPSSKQCPDDSASCKTALTDVP STSHLGSIDLKRCESSGVPSVLIKHELAQLVKQPCIFDKSENCLSQNNGMHKSQIRLWIE SGQNMKCESTSASNSKGLDTPSKANRKRSRPGESAKPRPKDRQLIQDRIKELRELVPNGA KCSIDGLLEKTVKHMLFLQSVTKNADKLKDSTESKILGSENGPLWKDYFEGGATWAFDVG SQSMTCPIIVEDLDRPRQMLVEMLCEDRGIFLEIADFIKGLGLTILRGVMEMRKSKIWAR FTVEANRDVTRMEIFLSLVRLLEPNCDGSAAAENASNMNMPLGLVHQPVIPATGSIQ

Transcript Sequence

Transcript ID	Zm00001d053150_T018
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:216314331:216317295:1 gene:Zm00001d053150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein
Sequence	GGTTATGGAAAACATAAATTTTGTGATGTTTGCAAAGAAGTTGTGTTCTCAGCTAAACAA CCGTTCAAGCATGGCTGCATCTGCTTCGGCTAAAAACGCTTTAAGTCAGCATGGCCAGTC ACGTCCTGATACTGCAACTGTGTCAACTAGGACACCACCAAATGCATTGCTGAATGCATC TTTGCTTAAGGTTGCACAACAGAGTGGTCACCCTGTTAGAGAGCACGTTGTCTATGCTGA GCCTGACCTTAGGTTTAGACAACAAGCATCCTTCTGCGAGAACCAATTTGGAAGTAATTT ACAGAGTGTTGTTATGAACTCAAGTTTGACCTCCCCAAGCTTGGCATCAGTTAAAAAGCA GCCACTCTTGATGAACAGCATTGGGCAGTTACAGTTCAGTAATTATGTGCATTCATCGGC AGATTTGGCAAGAGATGTCATATTAAAATCCCTTGTGCGCCAGGACTCTTCTGTCTGCGA AACTACAAACATGAATATGCATCGTGGAAGATATATGGTATCCAATGATATAAATGGTTC TGGGGATTTTGATTTTCTCCCTGTAGGTGCCAAAGCAAGCAGAGCCAACTTATCAACCAG TGTGTCGAGTCAAATATTGGACCACACAACAAGAACACTGCAGCAAAAACAGTCTCTTGT CCCATTCAAAGTCACCCAATCTTCTGAATTCAATAAGAAAATGGAGAACCCTGAAAATGG ATCATTTCAAACCCCTTCAGTTCCAACTTCTGAATCTGGTGGTCAGGTTTCTAACAGTTT CAACATGGACCAAGAGAATCAATTGATTATGTCAAACAATGTACGGCAAGTTCAAAAGAT TAATAGATTTAGTGATCCAAGTGCTAATGTAAGCACTCAGAGAATGAAGAACAGGGATGT ATGCGAGTCGGGAATGCCCATTGAGAGAGGTTCCTCGTTGCTAGTGGAGCCTGGTGCAGA TAATGACTTGTTTGATATGCTTGGTTCTGAATTTCATCAGTTCTCCCACAACGTTGGGTC TGATTTGGTCACCTGGAGTGGTACAGAGTCTCAGAATTCAGATAGAGATGGCCCTGAATC ATCAATATATCTCAATAGCTCACCCCTTTTCAGTTCGTTAGACAACGAGCTTCACTATTC TGGTATCTTATCACTAACTGATACTGATCAACTATTGGATGCTGTCATCTCAAATGTCAA TCCAAGTAGTAAACAGTGTCCTGATGATAGTGCTTCTTGCAAGACTGCATTGACGGATGT TCCTAGCACATCTCATCTTGGTTCAATAGACTTGAAGAGATGTGAGTCCTCCGGCGTTCC TTCAGTGCTAATTAAGCACGAATTGGCACAGCTTGTTAAGCAACCATGTATTTTTGACAA ATCTGAGAACTGTCTTTCCCAAAATAATGGAATGCACAAGTCTCAGATACGCCTTTGGAT TGAGAGTGGTCAGAACATGAAATGTGAAAGTACTTCAGCTTCTAACAGCAAAGGTCTTGA TACGCCAAGCAAGGCGAATCGCAAGAGATCTCGACCCGGTGAAAGTGCTAAGCCACGACC TAAGGACCGGCAGCTGATACAGGACCGTATTAAAGAGCTTCGTGAGCTTGTACCGAATGG GGCAAAGTGTAGCATTGATGGTTTGTTGGAGAAGACGGTTAAGCACATGCTTTTCTTACA AAGTGTGACGAAGAATGCAGACAAGCTCAAGGACTCTACCGAGTCTAAGATACTTGGTAG TGAAAATGGCCCCCTTTGGAAAGACTACTTCGAAGGTGGGGCTACCTGGGCTTTTGATGT CGGCTCTCAGTCTATGACATGTCCAATCATTGTTGAGGATCTTGACCGACCTCGTCAGAT GCTTGTGGAGATGCTTTGCGAGGATAGAGGAATCTTCTTGGAGATAGCTGATTTCATCAA AGGACTAGGACTGACTATCTTGAGGGGTGTGATGGAAATGCGCAAAAGTAAAATCTGGGC ACGGTTCACTGTTGAGGCGAACCGGGACGTAACCAGAATGGAGATCTTTCTATCGCTTGT GCGCTTATTGGAGCCAAACTGTGACGGCAGTGCAGCGGCGGAGAACGCTAGCAACATGAA CATGCCTCTTGGCTTGGTGCACCAACCTGTCATCCCAGCAACAGGCAGCATCCAATGAGA CTAGAGGAAACCCTGAAGCATCTTCCCAAGTGCTAAGAGCAGGAGCTCAACTAACTTCTG CAGTGACTAGCATCGCCAATATGCCAGTGCATCGCCTGCTTTTCCTGAGACATCTTAATC CGTGCAAATGTGACATCCTTCATGAGACCAGGTCGCAGAAATGGAAGAAGGAAAACAACG CCAAGAGTGATTGTTAGGCAGTGTTTTGTTTGTATGATCTTAGTTTGTTTGTTAGTTAGC GCTGTTTGGTCGTATATTAGCGGATTTTTTTGGTACTGTTATTCAGAATGGAAATTCTTG GGTTGGT