Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053149_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:216214682:216218840:1 gene:Zm00001d053149 gene_biotype:protein_coding transcript_biotype:protein_coding description:Digalactosyldiacylglycerol synthase 1 chloroplastic
Sequence

ATGGCCAGCTTCGGCGTCGACACCCGCCCGGCCGCCGCGGCCTCCGGCGGCGGCGTGGGC
GTGGCGGGGACGAGGGAGGGCGCGCTCTCGTTCCTCTCCCGCGGGCTGCGGGAGGACCTC
CGTCTCATCCGCGCGCGGGCCGGGGAGCTCGAGACCTTCCTCAGCGCGCCGGTGCCGGAA
CCCGAGCTGTTCGCGCGCCTCCGTCGCGCCTACTCCTGCTCGGCGTCCTCTTCGCGGACG
CGGCTCGACCTGTCCGCCATCGGGAAGGCGTTCGAGGCCGACGCGTGGAGGGGCGCCAGG
ACTGCCAGGTGGAGGTGGGAGGCGGAGACGGAGGCGGAGGAGTGGGAGCCAGTCAGGATG
GTCAAGGCGCACCTCAGGGAGCTCGAGCGGAGGAGGCTGGCCCAGTCGCCCAGCGACATG
CTGCACAAGCTCAAGCTCAGCTTGAAATCACTGACCTTTGCGCCTGAAGCGTCTGAGGAT
GTTCTGCCACTGGATTTAGGGGAACTTCTTGCTTATTTTGTAAAGCAATCTGTACCACTA
TTCGACCAACTTGGTATAAAAAGAGATGTATGTGACAAGTTGGTGGAGTCTCTGTGCAGC
AAGCGCAAGGACCACCCTGCATATAGTTTTTTGTCAGCAACTGAATCATCTTCATTGAAA
AATGACAATGTTGGGAATGAACTCGACCTAAGAATAGCTAGCGCCCTACAGAGTACAGGA
CACCATTATGAAGGTGGATTTTGGAGTGATGGCCATAAGTCTGACATATCTGGCAAGAGA
CATGTTGCCATAGTCACCACTGCCAGTCTTCCCTGGATGACTGGAACGGCTGTGAATCCT
TTGTTTCGAGCTGCATACTTGGCTAAATCTTGCAAGCAAGATGTAACTTTGGTAGTGCCC
TGGCTTTGTAAGTCGGATCAGGAACTTGTGTACCCCAACAGCATGACTTTTAGTTCACCA
GAAGAGCAAGAAAAATATATGAGGAATTGGCTGGAAGAAAGAGTTGGTTTCAAGACAGAC
TTCAAAATATCATTTTATCCTGGAAAGTTTCAAAAGGAAAGGAGAAGCATAATTCCTGCT
GGGGACACTTCACAGTTCATACCATCAAAGGAAGCTGATATTGCAATCTTGGAAGAGCCC
GAGCACCTCAACTGGTATCATCACGGGAAACGATGGACAGATAAATTCAATCATGTGATC
GGTGTAGTGCATACAAATTATTTGGAGTACATCAAGAGGGAGAAGAATGGTGCTATTCAG
GCCTTTTTCGTTAAGCACATTAATAACCTGGTCGCCAGAGCTTATTGCCATAAGATCTTG
CGGCTGTCAGGTGCCACTCAAGATCTTCCCAAGTCGACGATCTGCAATGTGCACGGTGTG
AACCCCAAGTTTCTGGAGGTTGGAGAGAGGATAGCAGCAGAGCGGGAGTCTGGCCAGCAA
TCCTTCTCTAAAGGAGCTTATTTTCTGGGGAAGATGGTGTGGGCCAAGGGTTACAGAGAG
TTAATAGATTTGTTCGCGAAGCACAACAGTGATTTGGAAGGCTTCAAGCTGGACATCTAT
GGAAACGGTGAGGATTCACACGAGGTGCAATCGGCTGCCAGGAAGCTGAATCTGAACCTC
AACTTTCATAAGGGCCGGGACCATGCGGATGATTCTCTTCATGGGTACAAACCAGAACTA
CTCAGCTCAGTTGCCGTTTTCTTAAACATCTGTCTGCCTGCCTATATGGCACGGTACAAG
GTTTTCATAAACCCAAGCATCAGCGACGTCCTCTGCACCGCGACCGCGGAGGCGCTAGCG
ATGGGCAAGTTCGTGGTGTGCGCCGACCACCCGTCCAACGACTTCTTCCGGTCGTTCCCC
AACTGCCTGACATACAAGACCTCCGAGGACTTCGTCGCCAGAGTGAAGGAAGCCATGGCG
CGCGACCCGCAGCCCCTGACCCCGGAGCAGCGGTACAACCTGTCGTGGGATGCCGCCACC
CAGCGGTTCATGGAGCACTCCGAGCTCGACAAGGTCCTGAATGGCGACAGCAACAGCGAA
TGCGGTGGCTCTGTTGGCACCGAAACCGGCAAGAGCGCGGGCACAATGATGAGGAGATCC
GCCTCGGCGCCGAACATGTCAGACGTCGTGGACGGCGGCCTGGCGTTCGTGCACTATTGC
TTCACCGGCAGTGAGCTCTTGAGGCTGTCCACGGGTGCCGTCCCTGGAACCCGGGACTAC
AACAAGCAACATAGCCTGGACCTCCGTCTCCCGCCGCCCCAGGTACAGAACCCGGTCTAC
GGCTGGTAA

Peptide Sequence

PEP ID

Zm00001d053149_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:216214682:216218840:1 gene:Zm00001d053149 transcript:Zm00001d053149_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Digalactosyldiacylglycerol synthase 1 chloroplastic
Sequence

MASFGVDTRPAAAASGGGVGVAGTREGALSFLSRGLREDLRLIRARAGELETFLSAPVPE
PELFARLRRAYSCSASSSRTRLDLSAIGKAFEADAWRGARTARWRWEAETEAEEWEPVRM
VKAHLRELERRRLAQSPSDMLHKLKLSLKSLTFAPEASEDVLPLDLGELLAYFVKQSVPL
FDQLGIKRDVCDKLVESLCSKRKDHPAYSFLSATESSSLKNDNVGNELDLRIASALQSTG
HHYEGGFWSDGHKSDISGKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSCKQDVTLVVP
WLCKSDQELVYPNSMTFSSPEEQEKYMRNWLEERVGFKTDFKISFYPGKFQKERRSIIPA
GDTSQFIPSKEADIAILEEPEHLNWYHHGKRWTDKFNHVIGVVHTNYLEYIKREKNGAIQ
AFFVKHINNLVARAYCHKILRLSGATQDLPKSTICNVHGVNPKFLEVGERIAAERESGQQ
SFSKGAYFLGKMVWAKGYRELIDLFAKHNSDLEGFKLDIYGNGEDSHEVQSAARKLNLNL
NFHKGRDHADDSLHGYKPELLSSVAVFLNICLPAYMARYKVFINPSISDVLCTATAEALA
MGKFVVCADHPSNDFFRSFPNCLTYKTSEDFVARVKEAMARDPQPLTPEQRYNLSWDAAT
QRFMEHSELDKVLNGDSNSECGGSVGTETGKSAGTMMRRSASAPNMSDVVDGGLAFVHYC
FTGSELLRLSTGAVPGTRDYNKQHSLDLRLPPPQVQNPVYGW

Transcript Sequence

Transcript ID

Zm00001d053149_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:216214682:216218840:1 gene:Zm00001d053149 gene_biotype:protein_coding transcript_biotype:protein_coding description:Digalactosyldiacylglycerol synthase 1 chloroplastic
Sequence

ACCCATCCACACCGCCACCACCGCCTACCTCCACCACCAGTCCATCTCCTCCGCAGCGTC
TAAAGCCCTATCCGGATATCCCCACTCGCCGACGCCCGGACATATGGCCAGCTTCGGCGT
CGACACCCGCCCGGCCGCCGCGGCCTCCGGCGGCGGCGTGGGCGTGGCGGGGACGAGGGA
GGGCGCGCTCTCGTTCCTCTCCCGCGGGCTGCGGGAGGACCTCCGTCTCATCCGCGCGCG
GGCCGGGGAGCTCGAGACCTTCCTCAGCGCGCCGGTGCCGGAACCCGAGCTGTTCGCGCG
CCTCCGTCGCGCCTACTCCTGCTCGGCGTCCTCTTCGCGGACGCGGCTCGACCTGTCCGC
CATCGGGAAGGCGTTCGAGGCCGACGCGTGGAGGGGCGCCAGGACTGCCAGGTGGAGGTG
GGAGGCGGAGACGGAGGCGGAGGAGTGGGAGCCAGTCAGGATGGTCAAGGCGCACCTCAG
GGAGCTCGAGCGGAGGAGGCTGGCCCAGTCGCCCAGCGACATGCTGCACAAGCTCAAGCT
CAGCTTGAAATCACTGACCTTTGCGCCTGAAGCGTCTGAGGATGTTCTGCCACTGGATTT
AGGGGAACTTCTTGCTTATTTTGTAAAGCAATCTGTACCACTATTCGACCAACTTGGTAT
AAAAAGAGATGTATGTGACAAGTTGGTGGAGTCTCTGTGCAGCAAGCGCAAGGACCACCC
TGCATATAGTTTTTTGTCAGCAACTGAATCATCTTCATTGAAAAATGACAATGTTGGGAA
TGAACTCGACCTAAGAATAGCTAGCGCCCTACAGAGTACAGGACACCATTATGAAGGTGG
ATTTTGGAGTGATGGCCATAAGTCTGACATATCTGGCAAGAGACATGTTGCCATAGTCAC
CACTGCCAGTCTTCCCTGGATGACTGGAACGGCTGTGAATCCTTTGTTTCGAGCTGCATA
CTTGGCTAAATCTTGCAAGCAAGATGTAACTTTGGTAGTGCCCTGGCTTTGTAAGTCGGA
TCAGGAACTTGTGTACCCCAACAGCATGACTTTTAGTTCACCAGAAGAGCAAGAAAAATA
TATGAGGAATTGGCTGGAAGAAAGAGTTGGTTTCAAGACAGACTTCAAAATATCATTTTA
TCCTGGAAAGTTTCAAAAGGAAAGGAGAAGCATAATTCCTGCTGGGGACACTTCACAGTT
CATACCATCAAAGGAAGCTGATATTGCAATCTTGGAAGAGCCCGAGCACCTCAACTGGTA
TCATCACGGGAAACGATGGACAGATAAATTCAATCATGTGATCGGTGTAGTGCATACAAA
TTATTTGGAGTACATCAAGAGGGAGAAGAATGGTGCTATTCAGGCCTTTTTCGTTAAGCA
CATTAATAACCTGGTCGCCAGAGCTTATTGCCATAAGATCTTGCGGCTGTCAGGTGCCAC
TCAAGATCTTCCCAAGTCGACGATCTGCAATGTGCACGGTGTGAACCCCAAGTTTCTGGA
GGTTGGAGAGAGGATAGCAGCAGAGCGGGAGTCTGGCCAGCAATCCTTCTCTAAAGGAGC
TTATTTTCTGGGGAAGATGGTGTGGGCCAAGGGTTACAGAGAGTTAATAGATTTGTTCGC
GAAGCACAACAGTGATTTGGAAGGCTTCAAGCTGGACATCTATGGAAACGGTGAGGATTC
ACACGAGGTGCAATCGGCTGCCAGGAAGCTGAATCTGAACCTCAACTTTCATAAGGGCCG
GGACCATGCGGATGATTCTCTTCATGGGTACAAACCAGAACTACTCAGCTCAGTTGCCGT
TTTCTTAAACATCTGTCTGCCTGCCTATATGGCACGGTACAAGGTTTTCATAAACCCAAG
CATCAGCGACGTCCTCTGCACCGCGACCGCGGAGGCGCTAGCGATGGGCAAGTTCGTGGT
GTGCGCCGACCACCCGTCCAACGACTTCTTCCGGTCGTTCCCCAACTGCCTGACATACAA
GACCTCCGAGGACTTCGTCGCCAGAGTGAAGGAAGCCATGGCGCGCGACCCGCAGCCCCT
GACCCCGGAGCAGCGGTACAACCTGTCGTGGGATGCCGCCACCCAGCGGTTCATGGAGCA
CTCCGAGCTCGACAAGGTCCTGAATGGCGACAGCAACAGCGAATGCGGTGGCTCTGTTGG
CACCGAAACCGGCAAGAGCGCGGGCACAATGATGAGGAGATCCGCCTCGGCGCCGAACAT
GTCAGACGTCGTGGACGGCGGCCTGGCGTTCGTGCACTATTGCTTCACCGGCAGTGAGCT
CTTGAGGCTGTCCACGGGTGCCGTCCCTGGAACCCGGGACTACAACAAGCAACATAGCCT
GGACCTCCGTCTCCCGCCGCCCCAGGTACAGAACCCGGTCTACGGCTGGTAATTACTAGA
TATATAGGTATAGCTCTGCAGTCTGTAGCACTAGCTTTTTCATCTCCGCGTGTGTTTGTT
TGCCAAAGGCGAGCCTTGTTCATTATTACCTACAAACAACAACTACGACTGTAAGGATGA
CAACGCTGCGTCGTGATTTTGTAAGACTAGTGCTAGATAGAGAGGCGAGCATTTCTTCAA
TCAAAAAATTTAAAAAAAAGG