Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053144_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:216038534:216040340:-1 gene:Zm00001d053144 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

ATGGCGGTGGCTGCGACGACGGTGCTGGACATCGCGGAGCTCTCCTTCTCCGACTTAGTC
GCCCTCCTATCTCCCGAGACTCTTGCTGACGACGGCCGCTGCCGACGTGTTGTGGACACC
GTCGCAACCGAGCTCGGCCGAGGTGGGTCCGGGTTGCTGGCTATCGACGGAGTGCCGCGC
GTGGGCGCCCTCCGGCGACGACTCCTCCCCTTGGCCCGACGCGTCGCCCTCATGGATCAC
CTGACCCGCTCCCAACTCCTCAAGAAGCACGGTTTGGGCAGCGACGTTCCTTTGAAGAAG
CTCGATCGGTCCGTATCCTCGTTCGCGCAGCTTCTAAGGCATTCAGGTGAACTCGTCTTG
CTAGAGTCGGTGAACAACAATGGGTTCAATTCTTCTGATAGGGTACAGGATTGTAACCAA
TCCGAGGATGTTAATGATGATGATGATGCTGATGATATGGATAATCTGGGTGACCTCATT
AAGGAGCTTGGTTTGTACATGATGGAGCTTGGAATCTTGATTGCACGAGCTTGCGATATT
GTCATCGGTAGAGGTCAGCTAGAGCAGAGCATCACTGACTTTGGGACAGCAAAGGCTAGG
CTCATTCACTACCACTCTGAGCTGGATAACATTGTGATCAGGGATAACAATGCAAAGAGG
AAAGGTTCGGCAAGTAAAGTGGCAGTACAACCTTACCAGTCATGCTCTGGAAATAGGTCC
GGGTCAGTGTGCCCGTGCTGTATTAAGTCAGAAGATGGGACTACTGTAATGGCAATAGAA
GAAAATAATTCTAATGATGCCTCGATTCAGGGTCAGGCTGCTGAAATTTCCCTGTTAAAC
CTATGGCAGGAATGGCACTATGACTATGGAATCTTCACTGTTTTAACAGCACCGTTGTTC
ATGAGCGTCTCTGAGGATGAAAAAAGTTTGGTCAATCTGGAATATCATCCTCCTGATGGC
CACACACACCTACAGTTATGCAATGGAAGGAAGATATTCTCTGTTAGATGCTCTCCTGAG
AGCTTCATTGTTCAAGTTGGAGAGGCAGCAGACATCTTGTCCCAAGGGAAATTGAAATCT
ACACTTCATGCTGTGAGTAGACCTTCGAGTTCCACAGACATCAGCCGTGAGACTTTTGTT
GTCTTCCTACAGCCCTCGTGGGACAAACTTTTAGCTTATCCTGGTTACTCTTTAGATGCT
GAAGGTGAACCCATTCTTAGCAAGCAGACTTCAATCATCAGTGATGGATCAGCAGGGCCT
TGTAATGAAGATGCATTTATGCAAGAAATTCTGAAAAAAGTTCCACCTCTATCATCAAGG
CTAAAAGAAGGGATGACATTTGCAGAATTTTCTCGTCAGACAACAAAACAGTATTATGGT
GGCAATGGCATCCAACAGAACAATTGA

Peptide Sequence

PEP ID

Zm00001d053144_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:216038534:216040340:-1 gene:Zm00001d053144 transcript:Zm00001d053144_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

MAVAATTVLDIAELSFSDLVALLSPETLADDGRCRRVVDTVATELGRGGSGLLAIDGVPR
VGALRRRLLPLARRVALMDHLTRSQLLKKHGLGSDVPLKKLDRSVSSFAQLLRHSGELVL
LESVNNNGFNSSDRVQDCNQSEDVNDDDDADDMDNLGDLIKELGLYMMELGILIARACDI
VIGRGQLEQSITDFGTAKARLIHYHSELDNIVIRDNNAKRKGSASKVAVQPYQSCSGNRS
GSVCPCCIKSEDGTTVMAIEENNSNDASIQGQAAEISLLNLWQEWHYDYGIFTVLTAPLF
MSVSEDEKSLVNLEYHPPDGHTHLQLCNGRKIFSVRCSPESFIVQVGEAADILSQGKLKS
TLHAVSRPSSSTDISRETFVVFLQPSWDKLLAYPGYSLDAEGEPILSKQTSIISDGSAGP
CNEDAFMQEILKKVPPLSSRLKEGMTFAEFSRQTTKQYYGGNGIQQNN

Transcript Sequence

Transcript ID

Zm00001d053144_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:216038534:216040340:-1 gene:Zm00001d053144 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Sequence

GCAGAACTTCGCCGCCGTCGCCTTTCTCAGTTTCTCCTGGGAGCTTGCCTGTGTCGAACA
TGGCGGTGGCTGCGACGACGGTGCTGGACATCGCGGAGCTCTCCTTCTCCGACTTAGTCG
CCCTCCTATCTCCCGAGACTCTTGCTGACGACGGCCGCTGCCGACGTGTTGTGGACACCG
TCGCAACCGAGCTCGGCCGAGGTGGGTCCGGGTTGCTGGCTATCGACGGAGTGCCGCGCG
TGGGCGCCCTCCGGCGACGACTCCTCCCCTTGGCCCGACGCGTCGCCCTCATGGATCACC
TGACCCGCTCCCAACTCCTCAAGAAGCACGGTTTGGGCAGCGACGTTCCTTTGAAGAAGC
TCGATCGGTCCGTATCCTCGTTCGCGCAGCTTCTAAGGCATTCAGGTGAACTCGTCTTGC
TAGAGTCGGTGAACAACAATGGGTTCAATTCTTCTGATAGGGTACAGGATTGTAACCAAT
CCGAGGATGTTAATGATGATGATGATGCTGATGATATGGATAATCTGGGTGACCTCATTA
AGGAGCTTGGTTTGTACATGATGGAGCTTGGAATCTTGATTGCACGAGCTTGCGATATTG
TCATCGGTAGAGGTCAGCTAGAGCAGAGCATCACTGACTTTGGGACAGCAAAGGCTAGGC
TCATTCACTACCACTCTGAGCTGGATAACATTGTGATCAGGGATAACAATGCAAAGAGGA
AAGGTTCGGCAAGTAAAGTGGCAGTACAACCTTACCAGTCATGCTCTGGAAATAGGTCCG
GGTCAGTGTGCCCGTGCTGTATTAAGTCAGAAGATGGGACTACTGTAATGGCAATAGAAG
AAAATAATTCTAATGATGCCTCGATTCAGGGTCAGGCTGCTGAAATTTCCCTGTTAAACC
TATGGCAGGAATGGCACTATGACTATGGAATCTTCACTGTTTTAACAGCACCGTTGTTCA
TGAGCGTCTCTGAGGATGAAAAAAGTTTGGTCAATCTGGAATATCATCCTCCTGATGGCC
ACACACACCTACAGTTATGCAATGGAAGGAAGATATTCTCTGTTAGATGCTCTCCTGAGA
GCTTCATTGTTCAAGTTGGAGAGGCAGCAGACATCTTGTCCCAAGGGAAATTGAAATCTA
CACTTCATGCTGTGAGTAGACCTTCGAGTTCCACAGACATCAGCCGTGAGACTTTTGTTG
TCTTCCTACAGCCCTCGTGGGACAAACTTTTAGCTTATCCTGGTTACTCTTTAGATGCTG
AAGGTGAACCCATTCTTAGCAAGCAGACTTCAATCATCAGTGATGGATCAGCAGGGCCTT
GTAATGAAGATGCATTTATGCAAGAAATTCTGAAAAAAGTTCCACCTCTATCATCAAGGC
TAAAAGAAGGGATGACATTTGCAGAATTTTCTCGTCAGACAACAAAACAGTATTATGGTG
GCAATGGCATCCAACAGAACAATTGAGCACTTGCAATACAATGGCAATGCATGTAGCACA
CAATGAACTGATGTATTGACTTACATTTTGATACTGATTTGGATGCACAAAACTAAAGCA
TCCTGGCAAACAATGCATACGGCTGATCCTCCTTGATGACTAAGTTTTGCAATTGTTTGT
TGGGAATAGTCCCACATTGTGAGTTGTGGGTGGGCAAACATGATTTATATGGTTGAGGTT
ATAACCTTCTAATAGGCTAACTTTTTGGTGAGTATTGAATCAACAGA