Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053135_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:215474432:215476369:-1 gene:Zm00001d053135 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-mannose binding lectin family protein

Sequence

ATGGGAGCGAGGCGTAGTAGCACTTGGCCGCACCACCTCCCGCTGCTGTTCTTCCTCGTC
CTCGTCAATACCAGCCATACTACCACCATCAACATCACCAACCGATGCCCCTACACAGTG
TGGCCGGCCGCCACACCAGTGGGCGGCGGCATGCAACTGGAGCCAGGGAAGTCTTGGGTG
CTTCAAGTGCCTGGTAACACCCAAAGTGGCCTCGTGTGGGCGCGCACGGGCTGTTCATTC
GACGGCCACGGCAACATGTCCTGTGAGACGGGTGACTGCGGCGGCGTGCTGGCATGCGCG
AGCAGCGGCCAGCCGCCCTTCACGCGTGCAGAATTCAGCCTGGGTGGCCTAAACAACACG
GATTTCTTCGACATGAACCTCATCGGTGGCTTCAATGTGCCCATGGACTTCCTGCCGGTG
CCATCCAATGGATCGTCAGGGTGCAGCAGGGGGCCTCGCTGCCCAGCCGACATCACGTCG
CAGTGCCCCGGTGAGCTCAAGGTGCCAGGGGGTTGCCGCGGCGCCTGCCAGCACTGCAAC
GGCAGCACGGTAAACAGTAACACGGTGTTCTATGTGCGGATGTGCCCCGATGCCTACAGC
TACTCGCTGGATCAAGGGCCCATCATGTATGTGTGTCCGTCAGGAACAGACTACCAGATC
ATTTTCTGCCCCCCAGTCGACCTTGTGTCATTGTCTCCCCCTCCAATTACACCATTGTCT
CCCCCTCCAACACCAACTTCACCTACTGCGAATGGAACAAGCAGCATCACATCCTCATCA
AAATCCAAGAACCGAAGCTTATTTGGTTTTGTTCTAGGTGGTTCTTTAGCTGGCTTCATT
TTTATCGCATCATTGGCCCTTTTCTTTATCTTGCATAGACGACGATTGCAGCGACGCCAA
GAGATGCAGGAAGAGGAGGAAGCAGAGTTTGGGAGGCTACCAGGGATGCCCAGAAGGTTC
ACATTTGAGCAGCTACAAGATGCAACTGATCAGTTCAGAGAGAAGCTCGGGGAAGGAGGA
TTCGGGTCCGTTTTCAAAGGACGTTTTGGTGAGGAAGCAATCGCCGTGAAACGCTTGGAT
AGATCTGGTCAGGGAAAGAGGGAATTTTTGGCGGAGGTCCAGACCATCGGCAGCATTCAC
CACATCAATCTGGTGAGGGTAATCGGTTTCTGCGCAGAGAAAACGCACAGGCTCCTGGTT
TATGAGTACATGCCCAAAGGATCACTGGACCAGTGGACCTTTCACCGGCAGGGTGATGAC
GAAACTCCTCGCCTGCACTGGCAAACGCGACGCAAGATTATTGCTCATATAGCAAAGGGC
CTCTCCTATCTTCACGAGGAGTGCATGAAGAGAGTTGCTCACTTGGATGTGAAACCACAA
AACATCCTCTTAGATGACAACTTCGATGCTAAACTCTCTGATTTTGGACTCTGCAAGCTC
ATAGACCGGGAAAAGAGCCAAGTGGTCACTAGAATGAGAGGCACGCCTGGATATCTAGCT
CCCGAATGGTTGACATCGCACATCACAGAAAAGGCTGATGTATATAGCTTTGGTGTGGTG
GTAATGGAGATCGTCAGTGGAAGGAAGAACCTGGACACTTCTCGGTCTGAAAAGAGCATT
CATCTTATTACCTTGCTGGAGGAGAACTTGAAGAATGATCGGTTGGTAGATTTGATTGAT
ATGTGCAGTAGTAGTGACAGTCAGGCACAGGAGCAAGAAGCAATTCAGATGATAAAGCTT
GCAATGTGGTGTTTGCAGATTGATTGCAAACGAAGGCCTAAAATGTCTGAGGTCGTAAAA
GTCTTGGAGGGCACCATCAGTGCCGAAACTGATATAGATCATAACTTTGTTGTGACACAT
CGACCAAGCTTTGACGCTCCTGGAATTGCGGGCATGTCAGCTGCACCTCTGGCCTCAGAA
GTGTCAGGCCCAAGGTGA

Peptide Sequence

PEP ID

Zm00001d053135_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:215474432:215476369:-1 gene:Zm00001d053135 transcript:Zm00001d053135_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-mannose binding lectin family protein

Sequence

MGARRSSTWPHHLPLLFFLVLVNTSHTTTINITNRCPYTVWPAATPVGGGMQLEPGKSWV
LQVPGNTQSGLVWARTGCSFDGHGNMSCETGDCGGVLACASSGQPPFTRAEFSLGGLNNT
DFFDMNLIGGFNVPMDFLPVPSNGSSGCSRGPRCPADITSQCPGELKVPGGCRGACQHCN
GSTVNSNTVFYVRMCPDAYSYSLDQGPIMYVCPSGTDYQIIFCPPVDLVSLSPPPITPLS
PPPTPTSPTANGTSSITSSSKSKNRSLFGFVLGGSLAGFIFIASLALFFILHRRRLQRRQ
EMQEEEEAEFGRLPGMPRRFTFEQLQDATDQFREKLGEGGFGSVFKGRFGEEAIAVKRLD
RSGQGKREFLAEVQTIGSIHHINLVRVIGFCAEKTHRLLVYEYMPKGSLDQWTFHRQGDD
ETPRLHWQTRRKIIAHIAKGLSYLHEECMKRVAHLDVKPQNILLDDNFDAKLSDFGLCKL
IDREKSQVVTRMRGTPGYLAPEWLTSHITEKADVYSFGVVVMEIVSGRKNLDTSRSEKSI
HLITLLEENLKNDRLVDLIDMCSSSDSQAQEQEAIQMIKLAMWCLQIDCKRRPKMSEVVK
VLEGTISAETDIDHNFVVTHRPSFDAPGIAGMSAAPLASEVSGPR

Transcript Sequence

Transcript ID

Zm00001d053135_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:215474432:215476369:-1 gene:Zm00001d053135 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-mannose binding lectin family protein

Sequence

ATGGGAGCGAGGCGTAGTAGCACTTGGCCGCACCACCTCCCGCTGCTGTTCTTCCTCGTC
CTCGTCAATACCAGCCATACTACCACCATCAACATCACCAACCGATGCCCCTACACAGTG
TGGCCGGCCGCCACACCAGTGGGCGGCGGCATGCAACTGGAGCCAGGGAAGTCTTGGGTG
CTTCAAGTGCCTGGTAACACCCAAAGTGGCCTCGTGTGGGCGCGCACGGGCTGTTCATTC
GACGGCCACGGCAACATGTCCTGTGAGACGGGTGACTGCGGCGGCGTGCTGGCATGCGCG
AGCAGCGGCCAGCCGCCCTTCACGCGTGCAGAATTCAGCCTGGGTGGCCTAAACAACACG
GATTTCTTCGACATGAACCTCATCGGTGGCTTCAATGTGCCCATGGACTTCCTGCCGGTG
CCATCCAATGGATCGTCAGGGTGCAGCAGGGGGCCTCGCTGCCCAGCCGACATCACGTCG
CAGTGCCCCGGTGAGCTCAAGGTGCCAGGGGGTTGCCGCGGCGCCTGCCAGCACTGCAAC
GGCAGCACGGTAAACAGTAACACGGTGTTCTATGTGCGGATGTGCCCCGATGCCTACAGC
TACTCGCTGGATCAAGGGCCCATCATGTATGTGTGTCCGTCAGGAACAGACTACCAGATC
ATTTTCTGCCCCCCAGTCGACCTTGTGTCATTGTCTCCCCCTCCAATTACACCATTGTCT
CCCCCTCCAACACCAACTTCACCTACTGCGAATGGAACAAGCAGCATCACATCCTCATCA
AAATCCAAGAACCGAAGCTTATTTGGTTTTGTTCTAGGTGGTTCTTTAGCTGGCTTCATT
TTTATCGCATCATTGGCCCTTTTCTTTATCTTGCATAGACGACGATTGCAGCGACGCCAA
GAGATGCAGGAAGAGGAGGAAGCAGAGTTTGGGAGGCTACCAGGGATGCCCAGAAGGTTC
ACATTTGAGCAGCTACAAGATGCAACTGATCAGTTCAGAGAGAAGCTCGGGGAAGGAGGA
TTCGGGTCCGTTTTCAAAGGACGTTTTGGTGAGGAAGCAATCGCCGTGAAACGCTTGGAT
AGATCTGGTCAGGGAAAGAGGGAATTTTTGGCGGAGGTCCAGACCATCGGCAGCATTCAC
CACATCAATCTGGTGAGGGTAATCGGTTTCTGCGCAGAGAAAACGCACAGGCTCCTGGTT
TATGAGTACATGCCCAAAGGATCACTGGACCAGTGGACCTTTCACCGGCAGGGTGATGAC
GAAACTCCTCGCCTGCACTGGCAAACGCGACGCAAGATTATTGCTCATATAGCAAAGGGC
CTCTCCTATCTTCACGAGGAGTGCATGAAGAGAGTTGCTCACTTGGATGTGAAACCACAA
AACATCCTCTTAGATGACAACTTCGATGCTAAACTCTCTGATTTTGGACTCTGCAAGCTC
ATAGACCGGGAAAAGAGCCAAGTGGTCACTAGAATGAGAGGCACGCCTGGATATCTAGCT
CCCGAATGGTTGACATCGCACATCACAGAAAAGGCTGATGTATATAGCTTTGGTGTGGTG
GTAATGGAGATCGTCAGTGGAAGGAAGAACCTGGACACTTCTCGGTCTGAAAAGAGCATT
CATCTTATTACCTTGCTGGAGGAGAACTTGAAGAATGATCGGTTGGTAGATTTGATTGAT
ATGTGCAGTAGTAGTGACAGTCAGGCACAGGAGCAAGAAGCAATTCAGATGATAAAGCTT
GCAATGTGGTGTTTGCAGATTGATTGCAAACGAAGGCCTAAAATGTCTGAGGTCGTAAAA
GTCTTGGAGGGCACCATCAGTGCCGAAACTGATATAGATCATAACTTTGTTGTGACACAT
CGACCAAGCTTTGACGCTCCTGGAATTGCGGGCATGTCAGCTGCACCTCTGGCCTCAGAA
GTGTCAGGCCCAAGGTGA