Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053127_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:4:214706343:214710403:1 gene:Zm00001d053127 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 2
Sequence	ATGAGGTCGCCCCACCGCTGCTGCACTGCGAAGGCCGTCTCGTCCTCACACCCGCTCGCG CTCACTAGGATGTGGTGCCCGAAACGCCGGTGGAATGCCAAAGGGACCGACCCCTCCACC AAGGCCGCCGGCTCAGCCAGCATTGCCCGGCCGCCAGCGGATCCGAGCGCCTCCACCACC GCGCTACCACCAGCGACGCCCACGCCCTGGCCACTAACACCCTCCCCGCATGGAACTATA GGCGCTTGCGAGCTAGCAGGGCAGGTGCCTCGCCACCGCCGTCCTGGGGCCCACGCGGGC CTCCTGGCCAGCCCCTCTGGCAGCGGAGCCTCCATCGGATTCTGGCAAGGGGACATTAGG TACCTGATGGAGGATGTGCAAGTGATGAAACCGACAATATTCTGTGGTGTTCCTCGTGTT TATGATCGTATATATACAGGTATAAACATGAAAATTCAGTCTGGAGGGATGATAGCCAGA CACCTTTTTCAGTATGCCTACAACTACAAACTTGCCAATATGAGGAAAGGGCTGAAACAG CATGAAGCATCACCGTTTTTCGACAAGATAGTTTTCAGCAAAATAAAGGAAGGGCTTGGA GGGCGTATACGTCTCATGATAGCTGGAGCAGCACCTTTGCCAGGGCAAATCGAAGAATTC ATGCGGGTAACCACCTGCAGCGTTGTAGTACAAGGATATGGGCTCACTGAGAGTTGTGCA GGATGCTTCACGTCAATCGCCAACATTTTCTCAATGATTGGAACAGTCGGCCCTCCTGTC ACAACAATAGAAGCACGGCTGGAGTCGGTCCCTGAAATGGGCTACGACGCACTGTCAGAC ACGCCCCGGGGCGAGATCTGCTTGAGGGGCCACACCATGTTCTCCGGGTACTACAAGCGC CCTAGCCTCACTGAAGAAGTGTTCTCAGATGGCTGGTTCCATACAGGTGATATCGGGGAG TGGCAATCCAATGGCACGATGAAGATCATCGACAGAAAGAAGAACATCTTCAAGCTGTCC CAGGGGGAGTATGTGGCAGTTGAGGTCCTGGAAAGAGCATACCTGCAGTCACCCCTTGTG GCATCGGTCTGGGTCTACGGGAACAGCTTCGAGTCGTTCCTCGTTGCCGTGGCTGTCCCT GAGAGGCAGGCTCTCGAGGAATGGGCAGCAGCCAACAGCAAGGCCGGCGACTTTGCAGAG CTGTGCGCTGATCCCAAGGCGAGGACCTACGTTCGGGATCAGCTGAACCAAACTGGGAAG AAACTTGGGTTGAGAGGCTTCGAGATGCTGAAAGCAGTCTACCTGGAGCCGGTGCCTTTC AGCATCGAGAAGGACCTCGTCACTCCAACCTTTAAGCTCAAGAGACCCCAGCTGCTCAAG TATTACAAGGATCGGGTCGACCAAATGTACAAGGATGCCAAGGAGGGGAGAGCTGCGCCA TGA

Peptide Sequence

PEP ID	Zm00001d053127_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:4:214706343:214710403:1 gene:Zm00001d053127 transcript:Zm00001d053127_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 2
Sequence	MRSPHRCCTAKAVSSSHPLALTRMWCPKRRWNAKGTDPSTKAAGSASIARPPADPSASTT ALPPATPTPWPLTPSPHGTIGACELAGQVPRHRRPGAHAGLLASPSGSGASIGFWQGDIR YLMEDVQVMKPTIFCGVPRVYDRIYTGINMKIQSGGMIARHLFQYAYNYKLANMRKGLKQ HEASPFFDKIVFSKIKEGLGGRIRLMIAGAAPLPGQIEEFMRVTTCSVVVQGYGLTESCA GCFTSIANIFSMIGTVGPPVTTIEARLESVPEMGYDALSDTPRGEICLRGHTMFSGYYKR PSLTEEVFSDGWFHTGDIGEWQSNGTMKIIDRKKNIFKLSQGEYVAVEVLERAYLQSPLV ASVWVYGNSFESFLVAVAVPERQALEEWAAANSKAGDFAELCADPKARTYVRDQLNQTGK KLGLRGFEMLKAVYLEPVPFSIEKDLVTPTFKLKRPQLLKYYKDRVDQMYKDAKEGRAAP

Transcript Sequence

Transcript ID	Zm00001d053127_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:214706343:214710403:1 gene:Zm00001d053127 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 2
Sequence	ATGAGGTCGCCCCACCGCTGCTGCACTGCGAAGGCCGTCTCGTCCTCACACCCGCTCGCG CTCACTAGGATGTGGTGCCCGAAACGCCGGTGGAATGCCAAAGGGACCGACCCCTCCACC AAGGCCGCCGGCTCAGCCAGCATTGCCCGGCCGCCAGCGGATCCGAGCGCCTCCACCACC GCGCTACCACCAGCGACGCCCACGCCCTGGCCACTAACACCCTCCCCGCATGGAACTATA GGCGCTTGCGAGCTAGCAGGGCAGGTGCCTCGCCACCGCCGTCCTGGGGCCCACGCGGGC CTCCTGGCCAGCCCCTCTGGCAGCGGAGCCTCCATCGGATTCTGGCAAGGGGACATTAGG TACCTGATGGAGGATGTGCAAGTGATGAAACCGACAATATTCTGTGGTGTTCCTCGTGTT TATGATCGTATATATACAGGTATAAACATGAAAATTCAGTCTGGAGGGATGATAGCCAGA CACCTTTTTCAGTATGCCTACAACTACAAACTTGCCAATATGAGGAAAGGGCTGAAACAG CATGAAGCATCACCGTTTTTCGACAAGATAGTTTTCAGCAAAATAAAGGAAGGGCTTGGA GGGCGTATACGTCTCATGATAGCTGGAGCAGCACCTTTGCCAGGGCAAATCGAAGAATTC ATGCGGGTAACCACCTGCAGCGTTGTAGTACAAGGATATGGGCTCACTGAGAGTTGTGCA GGATGCTTCACGTCAATCGCCAACATTTTCTCAATGATTGGAACAGTCGGCCCTCCTGTC ACAACAATAGAAGCACGGCTGGAGTCGGTCCCTGAAATGGGCTACGACGCACTGTCAGAC ACGCCCCGGGGCGAGATCTGCTTGAGGGGCCACACCATGTTCTCCGGGTACTACAAGCGC CCTAGCCTCACTGAAGAAGTGTTCTCAGATGGCTGGTTCCATACAGGTGATATCGGGGAG TGGCAATCCAATGGCACGATGAAGATCATCGACAGAAAGAAGAACATCTTCAAGCTGTCC CAGGGGGAGTATGTGGCAGTTGAGGTCCTGGAAAGAGCATACCTGCAGTCACCCCTTGTG GCATCGGTCTGGGTCTACGGGAACAGCTTCGAGTCGTTCCTCGTTGCCGTGGCTGTCCCT GAGAGGCAGGCTCTCGAGGAATGGGCAGCAGCCAACAGCAAGGCCGGCGACTTTGCAGAG CTGTGCGCTGATCCCAAGGCGAGGACCTACGTTCGGGATCAGCTGAACCAAACTGGGAAG AAACTTGGGTTGAGAGGCTTCGAGATGCTGAAAGCAGTCTACCTGGAGCCGGTGCCTTTC AGCATCGAGAAGGACCTCGTCACTCCAACCTTTAAGCTCAAGAGACCCCAGCTGCTCAAG TATTACAAGGATCGGGTCGACCAAATGTACAAGGATGCCAAGGAGGGGAGAGCTGCGCCA TGAGCCCATGACGGCATTGCCAATTTGCCACGAGTGGCTATGATCCTGAGCATTGTGATT CCTCGAAAGCGTGTACATATTGATTATCACAATTTGTAAGTTTAAGGCATGTGTGTTCTA TGCCAAAATGTCAGCAGAAAATGAATTGGCTAAGAAGCTCGTGAATCGTGATAGCTTACA TTAATAAATTTATTAAGCTAGTCCATTACCTTCACACACTCCTTACTTTTTTGTTTTTGT TTGGTTTGTGGAATAGAAGATGAGTTTATCC