Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d053067_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:211990615:211995460:1 gene:Zm00001d053067 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding Rossmann-fold superfamily protein
Sequence

ATGTTTGAGCAGGCGGTGGCAGATTTCTGCTGGCATGCGAGGGAAGTAGTGTCGTCAGGG
ATGGGGCTCTGGGGTTGGCCGTGGGGGCGACGTGGGCCGTCGGGCTTCGGCTCCGCGTCC
ACCGCCGAGGAGGTCACCGCCGGCGTCGACGCAAGCAACATCACTGCCATCGTCACAGGA
GCGACGAATGGCATTGGAAAGGAGACAGCCAGAGTTCTAGCACTGAGGGGAGCCAAGGTA
ATCATACCAGCTAGGACACTGGAGAGTGGCCTCAAGTTGAAGGAGAGCCTCGCAGATGAG
GTCCCAAGCTCCAAGGTACACGTTATGGAGATGGACCTGAGCTGTCTCAGCTCCGTCCGC
GACTTCGCACGGTCCTTCAATTCATCCCACAAGCATCTGAACCTCCTCATAAACAATGCA
GGGATCATGGCCTGCCCTTACCAGCTGTCCAAGGATGGAATTGAGCTGCAATTCGCAACG
AATCATGTTGGCCATTTCTTGCTGACAAGTCTCCTGCTAGACAAGATGAAATCAACTGCT
GCAGAGACAGGTGTGCAGGGAAGGATCATAAACGTATCATCGGTCGCGCATAAAAGAAGT
GATGGTACATGCTTTGAGCTGAACAAGCTAAACGATAAGGCTAGGTACAAACCGTTCATT
GCATACGCGCATTCGAAGTTAGCCAATATTCTCCACACAAATGAGTTGTCCAGGCGTTTT
CAGGAAGAAGGATGCAACCTGACAGCGAATTCCCTGCATCCTGGAGTGATCATCACCAAT
ATCATTCGCTATGTTGCTGGAAACAGTGCGCTGATTTCGGCTCTCTCCCCTGTAGCAAAT
CTTGTTCTGAAGAGCGTGCCCCGGGGGGCTGCAACTACTTGTTACTTGGCATTGCACCCT
AATGTCAAAGGTGTATCTGGTAAATACTTCGCTGATTGCAATGAAGCAACACCGACTGCT
GTCGCGAGAGACTCAGAGCTGGCGAAGAGGCTATGGTCGTTCAGCGAAGAACTTGTCAAG
ATCTATGCTGATATGTCACAGACGACACAGGCAAGCGAAGAGGAGGAAACCACGGTTACG
AAAGACGTTTTCCAAGACAAGTAG

Peptide Sequence

PEP ID

Zm00001d053067_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:211990615:211995460:1 gene:Zm00001d053067 transcript:Zm00001d053067_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding Rossmann-fold superfamily protein
Sequence

MFEQAVADFCWHAREVVSSGMGLWGWPWGRRGPSGFGSASTAEEVTAGVDASNITAIVTG
ATNGIGKETARVLALRGAKVIIPARTLESGLKLKESLADEVPSSKVHVMEMDLSCLSSVR
DFARSFNSSHKHLNLLINNAGIMACPYQLSKDGIELQFATNHVGHFLLTSLLLDKMKSTA
AETGVQGRIINVSSVAHKRSDGTCFELNKLNDKARYKPFIAYAHSKLANILHTNELSRRF
QEEGCNLTANSLHPGVIITNIIRYVAGNSALISALSPVANLVLKSVPRGAATTCYLALHP
NVKGVSGKYFADCNEATPTAVARDSELAKRLWSFSEELVKIYADMSQTTQASEEEETTVT
KDVFQDK

Transcript Sequence

Transcript ID

Zm00001d053067_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:211990615:211995460:1 gene:Zm00001d053067 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding Rossmann-fold superfamily protein
Sequence

CTTTTCCAAAAAAAAAAGAAGCCCCTCCTATCCATCCCTATCCCTACCCCTACGAGTATC
CAAGTCCAACCAGCAAGAGGGGAGGCGCTGCACGCAGGTCACGCGGCGATGGACATATGC
GATGTTTGAGCAGGCGGTGGCAGATTTCTGCTGGCATGCGAGGGAAGTAGTGTCGTCAGG
GATGGGGCTCTGGGGTTGGCCGTGGGGGCGACGTGGGCCGTCGGGCTTCGGCTCCGCGTC
CACCGCCGAGGAGGTCACCGCCGGCGTCGACGCAAGCAACATCACTGCCATCGTCACAGG
AGCGACGAATGGCATTGGAAAGGAGACAGCCAGAGTTCTAGCACTGAGGGGAGCCAAGGT
AATCATACCAGCTAGGACACTGGAGAGTGGCCTCAAGTTGAAGGAGAGCCTCGCAGATGA
GGTCCCAAGCTCCAAGGTACACGTTATGGAGATGGACCTGAGCTGTCTCAGCTCCGTCCG
CGACTTCGCACGGTCCTTCAATTCATCCCACAAGCATCTGAACCTCCTCATAAACAATGC
AGGGATCATGGCCTGCCCTTACCAGCTGTCCAAGGATGGAATTGAGCTGCAATTCGCAAC
GAATCATGTTGGCCATTTCTTGCTGACAAGTCTCCTGCTAGACAAGATGAAATCAACTGC
TGCAGAGACAGGTGTGCAGGGAAGGATCATAAACGTATCATCGGTCGCGCATAAAAGAAG
TGATGGTACATGCTTTGAGCTGAACAAGCTAAACGATAAGGCTAGGTACAAACCGTTCAT
TGCATACGCGCATTCGAAGTTAGCCAATATTCTCCACACAAATGAGTTGTCCAGGCGTTT
TCAGGAAGAAGGATGCAACCTGACAGCGAATTCCCTGCATCCTGGAGTGATCATCACCAA
TATCATTCGCTATGTTGCTGGAAACAGTGCGCTGATTTCGGCTCTCTCCCCTGTAGCAAA
TCTTGTTCTGAAGAGCGTGCCCCGGGGGGCTGCAACTACTTGTTACTTGGCATTGCACCC
TAATGTCAAAGGTGTATCTGGTAAATACTTCGCTGATTGCAATGAAGCAACACCGACTGC
TGTCGCGAGAGACTCAGAGCTGGCGAAGAGGCTATGGTCGTTCAGCGAAGAACTTGTCAA
GATCTATGCTGATATGTCACAGACGACACAGGCAAGCGAAGAGGAGGAAACCACGGTTAC
GAAAGACGTTTTCCAAGACAAGTAGCGTAATATATGTTGCTGCGTTTTCTACTTTTTGTA
CATGTCCTCTGGGCCCGAATGGCCAGTGACTGTAATAGCACCTAAGTGCCCGAGACTGGT
AAGGGGTATTCAGACAATCAATCAAGAAACCACGGTGCGGCTGAGGCCTGAGGCAGTCCT
CTCCGTCGTTCACCCAAATCTGAGATCACTCGTGTGCTCACGTCGACGGTGATTAGCCGG
TGGCCCCGGGTGTTGCAAGATAGAAGACCAAAATTATACGATCATATGGAAACAAGATGT
GCCTGCAATCATATGATATGAGAGTACTAGTGTTG