Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053059_T015
CDS Infomation	cds chromosome:B73_RefGen_v4:4:211206630:211234298:1 gene:Zm00001d053059 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD/DEAH box RNA helicase family protein
Sequence	ATGGAGATTGAGTATGGTCTCTGCGCTGTCTCCCTGGACCACGAGGCTGTCAAGACATGG ATCTATCCAACTAATGTAGAAGTCCGAGAGTACCAGAAGTATATGGTTGAAAAGGCTCTG TTTACCAATACGTTAATAGCTTTGCCAACTGGACTTGGCAAAACTTTTATTGCTGCGGTA GTGATGTACAACTACTTTCGATGGTTTCCCGAAGGAAAAATAATATTTACCTGCCCTTCA CGTCCTCTTGTTACTCAGCAAATTGAGGCATGTCACAATACAGTGGGAATACCACAGGAG TGGATAATAGATATGAAAGGAGATCAATGCCCTTCTATTCGATCAGTTCACTGGAAGTCA AAGAGAGTGTTCTTTGTCACTCCACAAGTTCTTCAGAATGATATACAATCTGGTATATGC ATGGTACAACAAATAGTTTGCTTAGTGATAGATGAGGCTCATCGAGCGTCAGGAAATTAT GCATACTGCATGGTTATCCGAGAGTCACATTTGCAGTTGTTGGCAGCTCGTGTGCCTTTA AGGATTTTAGCTCTAACTGCTACACCAGGGTCCAAGCATTCAGATATCCAAAGTGTTATA GACAATTTAAACATTTCGGAGCTGATTTATTGTGATGAAGAAGATTCTAGAGTGAACCAA TATGTTAACACACGCAAAGTTGAACTTGTGCAGGTCCCTTTTGGCAGTGATGCTACTCAA GTCGCTGATATGCTTTTGGATATTATACGCCCACATATTAATCGGTTGCGTGATGCTGGT GTGATTGACCATCGGGACTATTCAAATTGGACCCAATTTGAACTGCTGAAATTTAAGGAT AAATTCAAGGAAGTACCCCCACCAAACATCCATGAAATCGAGAGAGGGGAAATTGAAAGA TCTTTTGTAATTCTTGGCCCACTTTGTCACACAAGGAAGTTGCTTTTGAGCCATGGAACC CAATTTGCACATGGGTATCTTGACAAACGATTGAAGGGAGGGTCATTGAATTTGATGCAC AAGAACGAATTCTTTTGGCGATTAAAAGAAAAGATGAAGCTTTCCTCATCTCACAGTATT ACTCCAAAAGTACAGGAATTGAAAAGGCTGATGGTTGAGCACTTTAATACTGATTCCAAT TTGAAGGACTCAAGGATTATTATATTTTCCCATTACCGAGAAAGTGTCAATGAAATATAT TGCTCACTACAGGATATTGATGATAAACTTGTCAGACCTGTTGAATTCATTGGTCAAAGC TCAGCAGGTAACCAACTGAAGGGGCAAAGCCAAAAAACTCAACAAGCTATTTTGAAGAAA TTCCGATCTGGGGTATATAATGTTTTGGTGGCAACATCAATTGGCGAGGAAGGACTTGAT ATTATTGAGGTTGATCTCGTGATCTGTTTCGATGCCAATGTCTCACCATTAAGGATGATT CAACGGATGGGAAGAACCGGGAGAAAGAATGAAGGTCGAGTTGTGGTTTTGGCTTATGAA GGTCAGGAATTGCAGGGGTACAGAAAGAAACAAGGAGATTGTCGAACCATGAGGAAGCTA TTGCATAACAGTGAGAGATTTGAATACCATGCTAGTCCTAGGATGGTTCCACATGTCTAT AAACCAGAAGTTAAGTATGTTAAGTTGACAATAGACAAGTATATTCCTCACGCAAAGAAA ATGAGGGTTGCCGCAAAAGAAGCCTCGCCAATTCCATGGAAGATGTCGGAGGCAGACGGT CAAATGATTACTAGGTACTTTAGTGTGTGCAAAGAAGAAGTTTGGAGGCCGTCCCTTGTG GCATTTCCTAGATTTCAGCTTTATCCAAGTGTCGTTCACAAAGTTCCACATTCATTTCGG ACAACAGATATGCTAACTGATGCTATGAAGCAACTTCAAGACCCATCTCTTTTCAGGACA AAGTGTGAAATCCCTTTGCAAGAACCTGCTAATGTTTCTGCTGTGGAGGAGGGTCTGGAA CATGAAGGTCTCTATGCTGCTAATGGAAATGAGGAAATGCCTCAGGAATGTGACGGTTTA GAAGCTTCATCGAGTGTAGTGTGGAATGAAAATGTTTCTGTGCCAGGTTCTCCAGTTAAG AAGTATCCGGTTCACACTTTCTTCAGTGGTGATTATGTAACTGTGGATAGAAGAGGCAGC GTTTTGATTACTTATGTACCTGTCCTGCCTCAAAAAATTGCATTCAGTAAGGACATAAAA AGTGCAGTTTGGAATAACAAAGATCAGAACAAAGCCAAACCTTACAGATCAGCAGCAGGC GTCTGTAGGACAACAGTTGAATTTGTCCTTGGTACCAATACAGACAAACATTTGTTTGTG GATAATTTATCAACTGTAGCCATGCATTCCCCTGAGTGCTCTTGGCATGGTGACAATGTT GATGACAATCATGTGCTTACTACTGTACCATCCAAAACACTGACAAGCCCAAGGGAGAAA ATGGACACACCCTGCAATGTTAAACTGCCAGAGTCCACCTATTCATATCAGGAAGACATG GAGCTTAATTCAAGGCTAACAGTATATATGGAAGAAGGAATTGTTCCTGAGTCTCCAGTG GTTGAAGTTAGCCACCTACGTCTAGAGATGGATGAAGCTGCAGACTTTGGAGCTGTGCCA AAGCGTGGTTCTCCAAAGTCACGTGATGAGAGGGCTCATGCCAATGTAGCTGGAAGTCAC AAAGGACCTTTGAACTTTGAGAAAAACGATCAATTGCTTTGTGGGGAAAACGAGTTTGAT GGATCATCAAGGTTGTATATGCTAGATCAGACTCGAGCCAAAACAGAAGAGCCAATGCAT CCTTCAAATGTGAAGATGGCTACTACTACAAGACATACTCCTGGGAATATGCTGTGTGAT AGTTTCTCAGGTGATTATCAGCTTAGGTCAGGGGGGGATGCATCGGGATCAGTCCAGCAA GCACCTAAGTACAGAAGACTATGCAAATATGGTGACAAGATCAAAAGAGTCTCTTCCATA TCTTTGGATGGCTGTGATGATAGGTTTGAAGAATGCAATATTGCTAATAAAGATAGGCCA AACCAAATAAAACATGCTATGGGGACAAAAAGGAAGACCAAGAGGCGTCTAGATGCCTAT ATTGACGAGGAAGTCGGGGTGTCTGAAGATGCATATGTTTCAGAGGATGAGGATGATAAT CAGAGTGAAGATAAATACGAAGATAGCTTCATTGATGATCAGGCAACTCCAACTGAATTT ACACAAACTGAACAAGGTGATCGACACAATGGTGACATGATGGGTTTCTACAGGCAATCG TTGTTTACTCAGTCCCCAGTAGTTCTACCCTCAAGGTACCTTGATGTTTCTTACAATTCT GCTTCTCGGACCGGAAATTCAAGCTATTCTTCAGAGGCTAGGCACAATTACACTGAGACT CCCAAAGAGATTCAAACACAACATCATACCATAAACCCAAGCCCATCGTACAGTTTTGTA CAGGATCGATGTGAAAGAGGGATCGCCAATTGTGAATCATCGACTAAGCTGGATTGCAGA AAGAGAAGGCTAAGCTTCCAGCAACCTCTGGCGATCCCTGTTATAAACCTTGAACCAGAA CCAGCACCAGAACCATCTCCACACGTCGCCAGCAGAGTCGCTGATCACCTATATTTTGAT GATGGTTTCTTTGAGAACCTTGATCTTGATGCAATTGAAGCTCAAGCAACCGAACAGTGG AGACAGAAGACCACACAATCGACGCAGAAACCAGTGGAAATTAAGAATGCATCAGACATG AGTTTTGCACCTCCGTCATTCGATTTAGGTCTCTGA

Peptide Sequence

PEP ID	Zm00001d053059_P015
PEP Infomation	pep chromosome:B73_RefGen_v4:4:211206630:211234298:1 gene:Zm00001d053059 transcript:Zm00001d053059_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD/DEAH box RNA helicase family protein
Sequence	MEIEYGLCAVSLDHEAVKTWIYPTNVEVREYQKYMVEKALFTNTLIALPTGLGKTFIAAV VMYNYFRWFPEGKIIFTCPSRPLVTQQIEACHNTVGIPQEWIIDMKGDQCPSIRSVHWKS KRVFFVTPQVLQNDIQSGICMVQQIVCLVIDEAHRASGNYAYCMVIRESHLQLLAARVPL RILALTATPGSKHSDIQSVIDNLNISELIYCDEEDSRVNQYVNTRKVELVQVPFGSDATQ VADMLLDIIRPHINRLRDAGVIDHRDYSNWTQFELLKFKDKFKEVPPPNIHEIERGEIER SFVILGPLCHTRKLLLSHGTQFAHGYLDKRLKGGSLNLMHKNEFFWRLKEKMKLSSSHSI TPKVQELKRLMVEHFNTDSNLKDSRIIIFSHYRESVNEIYCSLQDIDDKLVRPVEFIGQS SAGNQLKGQSQKTQQAILKKFRSGVYNVLVATSIGEEGLDIIEVDLVICFDANVSPLRMI QRMGRTGRKNEGRVVVLAYEGQELQGYRKKQGDCRTMRKLLHNSERFEYHASPRMVPHVY KPEVKYVKLTIDKYIPHAKKMRVAAKEASPIPWKMSEADGQMITRYFSVCKEEVWRPSLV AFPRFQLYPSVVHKVPHSFRTTDMLTDAMKQLQDPSLFRTKCEIPLQEPANVSAVEEGLE HEGLYAANGNEEMPQECDGLEASSSVVWNENVSVPGSPVKKYPVHTFFSGDYVTVDRRGS VLITYVPVLPQKIAFSKDIKSAVWNNKDQNKAKPYRSAAGVCRTTVEFVLGTNTDKHLFV DNLSTVAMHSPECSWHGDNVDDNHVLTTVPSKTLTSPREKMDTPCNVKLPESTYSYQEDM ELNSRLTVYMEEGIVPESPVVEVSHLRLEMDEAADFGAVPKRGSPKSRDERAHANVAGSH KGPLNFEKNDQLLCGENEFDGSSRLYMLDQTRAKTEEPMHPSNVKMATTTRHTPGNMLCD SFSGDYQLRSGGDASGSVQQAPKYRRLCKYGDKIKRVSSISLDGCDDRFEECNIANKDRP NQIKHAMGTKRKTKRRLDAYIDEEVGVSEDAYVSEDEDDNQSEDKYEDSFIDDQATPTEF TQTEQGDRHNGDMMGFYRQSLFTQSPVVLPSRYLDVSYNSASRTGNSSYSSEARHNYTET PKEIQTQHHTINPSPSYSFVQDRCERGIANCESSTKLDCRKRRLSFQQPLAIPVINLEPE PAPEPSPHVASRVADHLYFDDGFFENLDLDAIEAQATEQWRQKTTQSTQKPVEIKNASDM SFAPPSFDLGL

Transcript Sequence

Transcript ID	Zm00001d053059_T015
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:211206630:211234298:1 gene:Zm00001d053059 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD/DEAH box RNA helicase family protein
Sequence	TCACCAGGAGGCAGCAGGAGAAGGAGAGGGCTGCGTCGGAGGTGGCACCGGCACTGGCTG GTGGTCAGGGGCGCCCTGCAGCTCGTGCTGGCAAGGGATGCTCGGGTCGGGGCAATCGTG CTGGCAAGGGATGCTCTCGTCGGCCCAGTATGGAGATTGAGTATGGTCTCTGCGCTGTCT CCCTGGACCACGAGGCTGTCAAGACATGGATCTATCCAACTAATGTAGAAGTCCGAGAGT ACCAGAAGTATATGGTTGAAAAGGCTCTGTTTACCAATACGTTAATAGCTTTGCCAACTG GACTTGGCAAAACTTTTATTGCTGCGGTAGTGATGTACAACTACTTTCGATGGTTTCCCG AAGGAAAAATAATATTTACCTGCCCTTCACGTCCTCTTGTTACTCAGCAAATTGAGGCAT GTCACAATACAGTGGGAATACCACAGGAGTGGATAATAGATATGAAAGGAGATCAATGCC CTTCTATTCGATCAGTTCACTGGAAGTCAAAGAGAGTGTTCTTTGTCACTCCACAAGTTC TTCAGAATGATATACAATCTGGTATATGCATGGTACAACAAATAGTTTGCTTAGTGATAG ATGAGGCTCATCGAGCGTCAGGAAATTATGCATACTGCATGGTTATCCGAGAGTCACATT TGCAGTTGTTGGCAGCTCGTGTGCCTTTAAGGATTTTAGCTCTAACTGCTACACCAGGGT CCAAGCATTCAGATATCCAAAGTGTTATAGACAATTTAAACATTTCGGAGCTGATTTATT GTGATGAAGAAGATTCTAGAGTGAACCAATATGTTAACACACGCAAAGTTGAACTTGTGC AGGTCCCTTTTGGCAGTGATGCTACTCAAGTCGCTGATATGCTTTTGGATATTATACGCC CACATATTAATCGGTTGCGTGATGCTGGTGTGATTGACCATCGGGACTATTCAAATTGGA CCCAATTTGAACTGCTGAAATTTAAGGATAAATTCAAGGAAGTACCCCCACCAAACATCC ATGAAATCGAGAGAGGGGAAATTGAAAGATCTTTTGTAATTCTTGGCCCACTTTGTCACA CAAGGAAGTTGCTTTTGAGCCATGGAACCCAATTTGCACATGGGTATCTTGACAAACGAT TGAAGGGAGGGTCATTGAATTTGATGCACAAGAACGAATTCTTTTGGCGATTAAAAGAAA AGATGAAGCTTTCCTCATCTCACAGTATTACTCCAAAAGTACAGGAATTGAAAAGGCTGA TGGTTGAGCACTTTAATACTGATTCCAATTTGAAGGACTCAAGGATTATTATATTTTCCC ATTACCGAGAAAGTGTCAATGAAATATATTGCTCACTACAGGATATTGATGATAAACTTG TCAGACCTGTTGAATTCATTGGTCAAAGCTCAGCAGGTAACCAACTGAAGGGGCAAAGCC AAAAAACTCAACAAGCTATTTTGAAGAAATTCCGATCTGGGGTATATAATGTTTTGGTGG CAACATCAATTGGCGAGGAAGGACTTGATATTATTGAGGTTGATCTCGTGATCTGTTTCG ATGCCAATGTCTCACCATTAAGGATGATTCAACGGATGGGAAGAACCGGGAGAAAGAATG AAGGTCGAGTTGTGGTTTTGGCTTATGAAGGTCAGGAATTGCAGGGGTACAGAAAGAAAC AAGGAGATTGTCGAACCATGAGGAAGCTATTGCATAACAGTGAGAGATTTGAATACCATG CTAGTCCTAGGATGGTTCCACATGTCTATAAACCAGAAGTTAAGTATGTTAAGTTGACAA TAGACAAGTATATTCCTCACGCAAAGAAAATGAGGGTTGCCGCAAAAGAAGCCTCGCCAA TTCCATGGAAGATGTCGGAGGCAGACGGTCAAATGATTACTAGGTACTTTAGTGTGTGCA AAGAAGAAGTTTGGAGGCCGTCCCTTGTGGCATTTCCTAGATTTCAGCTTTATCCAAGTG TCGTTCACAAAGTTCCACATTCATTTCGGACAACAGATATGCTAACTGATGCTATGAAGC AACTTCAAGACCCATCTCTTTTCAGGACAAAGTGTGAAATCCCTTTGCAAGAACCTGCTA ATGTTTCTGCTGTGGAGGAGGGTCTGGAACATGAAGGTCTCTATGCTGCTAATGGAAATG AGGAAATGCCTCAGGAATGTGACGGTTTAGAAGCTTCATCGAGTGTAGTGTGGAATGAAA ATGTTTCTGTGCCAGGTTCTCCAGTTAAGAAGTATCCGGTTCACACTTTCTTCAGTGGTG ATTATGTAACTGTGGATAGAAGAGGCAGCGTTTTGATTACTTATGTACCTGTCCTGCCTC AAAAAATTGCATTCAGTAAGGACATAAAAAGTGCAGTTTGGAATAACAAAGATCAGAACA AAGCCAAACCTTACAGATCAGCAGCAGGCGTCTGTAGGACAACAGTTGAATTTGTCCTTG GTACCAATACAGACAAACATTTGTTTGTGGATAATTTATCAACTGTAGCCATGCATTCCC CTGAGTGCTCTTGGCATGGTGACAATGTTGATGACAATCATGTGCTTACTACTGTACCAT CCAAAACACTGACAAGCCCAAGGGAGAAAATGGACACACCCTGCAATGTTAAACTGCCAG AGTCCACCTATTCATATCAGGAAGACATGGAGCTTAATTCAAGGCTAACAGTATATATGG AAGAAGGAATTGTTCCTGAGTCTCCAGTGGTTGAAGTTAGCCACCTACGTCTAGAGATGG ATGAAGCTGCAGACTTTGGAGCTGTGCCAAAGCGTGGTTCTCCAAAGTCACGTGATGAGA GGGCTCATGCCAATGTAGCTGGAAGTCACAAAGGACCTTTGAACTTTGAGAAAAACGATC AATTGCTTTGTGGGGAAAACGAGTTTGATGGATCATCAAGGTTGTATATGCTAGATCAGA CTCGAGCCAAAACAGAAGAGCCAATGCATCCTTCAAATGTGAAGATGGCTACTACTACAA GACATACTCCTGGGAATATGCTGTGTGATAGTTTCTCAGGTGATTATCAGCTTAGGTCAG GGGGGGATGCATCGGGATCAGTCCAGCAAGCACCTAAGTACAGAAGACTATGCAAATATG GTGACAAGATCAAAAGAGTCTCTTCCATATCTTTGGATGGCTGTGATGATAGGTTTGAAG AATGCAATATTGCTAATAAAGATAGGCCAAACCAAATAAAACATGCTATGGGGACAAAAA GGAAGACCAAGAGGCGTCTAGATGCCTATATTGACGAGGAAGTCGGGGTGTCTGAAGATG CATATGTTTCAGAGGATGAGGATGATAATCAGAGTGAAGATAAATACGAAGATAGCTTCA TTGATGATCAGGCAACTCCAACTGAATTTACACAAACTGAACAAGGTGATCGACACAATG GTGACATGATGGGTTTCTACAGGCAATCGTTGTTTACTCAGTCCCCAGTAGTTCTACCCT CAAGGTACCTTGATGTTTCTTACAATTCTGCTTCTCGGACCGGAAATTCAAGCTATTCTT CAGAGGCTAGGCACAATTACACTGAGACTCCCAAAGAGATTCAAACACAACATCATACCA TAAACCCAAGCCCATCGTACAGTTTTGTACAGGATCGATGTGAAAGAGGGATCGCCAATT GTGAATCATCGACTAAGCTGGATTGCAGAAAGAGAAGGCTAAGCTTCCAGCAACCTCTGG CGATCCCTGTTATAAACCTTGAACCAGAACCAGCACCAGAACCATCTCCACACGTCGCCA GCAGAGTCGCTGATCACCTATATTTTGATGATGGTTTCTTTGAGAACCTTGATCTTGATG CAATTGAAGCTCAAGCAACCGAACAGTGGAGACAGAAGACCACACAATCGACGCAGAAAC CAGTGGAAATTAAGAATGCATCAGACATGAGTTTTGCACCTCCGTCATTCGATTTAGGTC TCTGATAGTGGTGGTAAAGTTAGCATCCATTCATGATGTCATCTAGCTGCAGTACCTAGC CATCTCAGAGCATGCTGAGAACTGCACAAGCAATGAGGTTTTCTGCAGAAGGCCCGAACC TGCATCACATGACAATGCCGCAGGATCTGGCATGTCTGCCGCTGTGATATTTATCGGCGC CCTGGAGCTGGAAGATGCGCTGGCGGCAGATTTTGTAGAGTATTTATCTCAGTACAGGCT CAATACACCATGTATATTCTCCTGTAAATACTGTTCGATGTATAAGGGTCTTATTGTATG CAGACATT