Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053016_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:209194062:209197337:-1 gene:Zm00001d053016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent protein kinase family protein
Sequence	ATGCAGCCGGACCCGAGCGGGAACACCAATGCGAAGGCGAAGCTGCCGTTGATGGCTCCG GCGCCGTCGTCGGGGCGCCCGGCGTCCGTGCTGCCGTACAAGACGGCGAACGTGCGGGAC CACTATCGCATCGGCAAGAAGCTGGGGCAGGGGCAGTTCGGCACCACGTACCACTGTGTG GGCAAGGCCGACGGCGCCGAGTACGCGTGCAAGTCCATTCCCAAGCGCAAGCTGCTGTGC CGGGAGGACTACGAGGACGTGTACCGCGAGATCCAGATCATGCACCACCTCTCCGAGCAC CCCAACGTCGTCCGCATCCGCGGCGCCTATGAGGACGCGCTCTTCGTGCACATTGTCATG GAGCTATGCGCCGGCGGCGAGCTCTTCGACCGCATCGTCGCCAAAGGCCACTACAGTGAG CGCGCGGCAGCGAACCTCATCAAGACCATTGTCGGGGTCGTGGAGGGATGCCACTCGCTC GGGGTCATGCACCGGGACCTCAAGCCGGAGAACTTTCTCTTTGCCAGCACCGCTGAGGAA GCCCCACTCAAGGCCACTGACTTTGGGCTGTCCATGTTCTACAAGCCCGGTGATAAATTC TCTGATGTCGTTGGAAGCCCTTATTATGTTGCACCAGAGGTACTTCAGAAATGTTATGGT CCAGAAGCTGATGTGTGGAGCGCAGGGGTAATTCTGTACATTTTGCTTTGTGGTGTCCCT CCATTTTGGGCAGAAACTGAGTCTGGAATCTTCAGGCAGATTATGCGAGCCAAACTTGAT TTTGAATCTGAACCCTGGCCCAGTATTTCTGATAGCGCTAAGGATCTGGTCCGCAATATG CTTACTCGGGATCCTAAAAAGAGATTTAGTGCTCATGAGGTTCTCTGCCACCCATGGATT GTTGATGATGCCGTGGCGCCTGATAAGCCTATTGATTCTGCTGTTCTCTCAAGGCTGAAG CATTTTTCGGCAATGAACAAGCTCAAGAAGATGGCATTAAGGGTTATTGCTGAAAGCCTG TCTGAGGAAGAGATTGGAGGCCTCAAGGAGTTGTTCAAGATGATTGATACTGACAATAGT GGGACTATAACATTTGATGAGCTGAAAGATGGCTTAAAAAGGGTAGGCTCCGAATTAACA GAGAACGAAATCCAGGCTCTAATGGAAGCAGCTGATATTGATAACAGCGGAACCATCGAC TATGGTGAATTCATCGCAGCTACTCTGCACATGAATAAGCTGGAGAGGGAGGAGAACTTG GTTTCGGCATTCTCATTTTTTGACAAAGACGGAAGTGGCTTTATAACCATTGATGAACTG TCACAAGCATGTCATGAATTCGGTCTTGATGACGTCCACCTCGAGGATATGATTAAAGAT GTTGACCAGAACAATGATGGCCAAATCGACTACAGCGAGTTCACAGCGATGATGAGGAAG GGCAATGCTGGTGCAACAGGAAGGAGAACCATGAGGAACAGCTTGCACTTGAATCTCGGC GAACTCTTGAATCCCAGCAAAACCTAG

Peptide Sequence

PEP ID	Zm00001d053016_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:209194062:209197337:-1 gene:Zm00001d053016 transcript:Zm00001d053016_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent protein kinase family protein
Sequence	MQPDPSGNTNAKAKLPLMAPAPSSGRPASVLPYKTANVRDHYRIGKKLGQGQFGTTYHCV GKADGAEYACKSIPKRKLLCREDYEDVYREIQIMHHLSEHPNVVRIRGAYEDALFVHIVM ELCAGGELFDRIVAKGHYSERAAANLIKTIVGVVEGCHSLGVMHRDLKPENFLFASTAEE APLKATDFGLSMFYKPGDKFSDVVGSPYYVAPEVLQKCYGPEADVWSAGVILYILLCGVP PFWAETESGIFRQIMRAKLDFESEPWPSISDSAKDLVRNMLTRDPKKRFSAHEVLCHPWI VDDAVAPDKPIDSAVLSRLKHFSAMNKLKKMALRVIAESLSEEEIGGLKELFKMIDTDNS GTITFDELKDGLKRVGSELTENEIQALMEAADIDNSGTIDYGEFIAATLHMNKLEREENL VSAFSFFDKDGSGFITIDELSQACHEFGLDDVHLEDMIKDVDQNNDGQIDYSEFTAMMRK GNAGATGRRTMRNSLHLNLGELLNPSKT

Transcript Sequence

Transcript ID	Zm00001d053016_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:209194062:209197337:-1 gene:Zm00001d053016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent protein kinase family protein
Sequence	GGTTTTCCGGTTTTTTGTCCAAGAACAGGCTCCTTTCCTGCTGCGGAGGCCGTCGTACGG TTCTTGATCCGGGGAGCACACCTGGGGCGCGCCAATGCAGCCGGACCCGAGCGGGAACAC CAATGCGAAGGCGAAGCTGCCGTTGATGGCTCCGGCGCCGTCGTCGGGGCGCCCGGCGTC CGTGCTGCCGTACAAGACGGCGAACGTGCGGGACCACTATCGCATCGGCAAGAAGCTGGG GCAGGGGCAGTTCGGCACCACGTACCACTGTGTGGGCAAGGCCGACGGCGCCGAGTACGC GTGCAAGTCCATTCCCAAGCGCAAGCTGCTGTGCCGGGAGGACTACGAGGACGTGTACCG CGAGATCCAGATCATGCACCACCTCTCCGAGCACCCCAACGTCGTCCGCATCCGCGGCGC CTATGAGGACGCGCTCTTCGTGCACATTGTCATGGAGCTATGCGCCGGCGGCGAGCTCTT CGACCGCATCGTCGCCAAAGGCCACTACAGTGAGCGCGCGGCAGCGAACCTCATCAAGAC CATTGTCGGGGTCGTGGAGGGATGCCACTCGCTCGGGGTCATGCACCGGGACCTCAAGCC GGAGAACTTTCTCTTTGCCAGCACCGCTGAGGAAGCCCCACTCAAGGCCACTGACTTTGG GCTGTCCATGTTCTACAAGCCCGGTGATAAATTCTCTGATGTCGTTGGAAGCCCTTATTA TGTTGCACCAGAGGTACTTCAGAAATGTTATGGTCCAGAAGCTGATGTGTGGAGCGCAGG GGTAATTCTGTACATTTTGCTTTGTGGTGTCCCTCCATTTTGGGCAGAAACTGAGTCTGG AATCTTCAGGCAGATTATGCGAGCCAAACTTGATTTTGAATCTGAACCCTGGCCCAGTAT TTCTGATAGCGCTAAGGATCTGGTCCGCAATATGCTTACTCGGGATCCTAAAAAGAGATT TAGTGCTCATGAGGTTCTCTGCCACCCATGGATTGTTGATGATGCCGTGGCGCCTGATAA GCCTATTGATTCTGCTGTTCTCTCAAGGCTGAAGCATTTTTCGGCAATGAACAAGCTCAA GAAGATGGCATTAAGGGTTATTGCTGAAAGCCTGTCTGAGGAAGAGATTGGAGGCCTCAA GGAGTTGTTCAAGATGATTGATACTGACAATAGTGGGACTATAACATTTGATGAGCTGAA AGATGGCTTAAAAAGGGTAGGCTCCGAATTAACAGAGAACGAAATCCAGGCTCTAATGGA AGCAGCTGATATTGATAACAGCGGAACCATCGACTATGGTGAATTCATCGCAGCTACTCT GCACATGAATAAGCTGGAGAGGGAGGAGAACTTGGTTTCGGCATTCTCATTTTTTGACAA AGACGGAAGTGGCTTTATAACCATTGATGAACTGTCACAAGCATGTCATGAATTCGGTCT TGATGACGTCCACCTCGAGGATATGATTAAAGATGTTGACCAGAACAATGATGGCCAAAT CGACTACAGCGAGTTCACAGCGATGATGAGGAAGGGCAATGCTGGTGCAACAGGAAGGAG AACCATGAGGAACAGCTTGCACTTGAATCTCGGCGAACTCTTGAATCCCAGCAAAACCTA GCGTGCATTGGAAGGTCTTGTCGGGTACATTCCCATGGCATATGAAGATTTTGGATGCGT TGTCGATCGGCTGGCCTATTCTGAGATGTTGAGCGGTTGTCCTGTGGTATTACTAAGATG CTGAAGAATTTTCCTAGAAGTACAACTGCCCTGCGGCATATATGTATAACTGTCGATGTA ATGTAGATTGAACATGGTCTAAACATTACTTCCCTAGAAGTACAACTTCTCTGCTGTCAA GTGTGTGTTTAGTTGATATTGAATAGCAATTTCTTTCTCTAA