Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d053004_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:208649304:208651866:-1 gene:Zm00001d053004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin import carrier2 description:Auxin transporter-like protein 3
Sequence	ATGGCATCGGAGAAGGTGGAGACGATCGTGGCAGGGAACTACATGGAGATGGAGCACGAG CCCGGCGGCGGCGGAGACCATGACCAGCAACCCAGCGGCGGCGCGGCGTCGTCCACTTCA TCCAGCTCCAGGGGCGGCGGCAAGAAGAAGGCCCTGTCGAGCCTGTTCTGGCACGGCGGG TCGGTGTACGACGCGTGGTTCAGCTGCGCGTCGAACCAGGTGGCGCAGGTGCTGCTGACG CTGCCCTACTCCTTCTCGCAGCTGGGCATGGCATCCGGGGTGGTGTTCCAGCTCTTCTAC GGCCTCATGGGCAGCTGGACCGCCTACCTCATCAGCATCCTCTACGTCGAGTACCGCACC AGGAAGGAGCGCGAGAAGGTCGACTTCAGGAACCATGTCATCCAGTGGTTTGAGGTTCTG GATGGGCTACTGGGGAAGCACTGGAGGAACGTCGGCCTCTTCTTCAACTGCACTTTCCTC CTCTTCGGCTCCGTCATCCAGCTCATCGCATGTGCAAGCAACATCTACTACATCAACGAC AAGTATGACAAGCGGACGTGGACGTACATCTTCGGCGCCTGCTGCGCCACCACCGTGTTC ATCCCCTCCTTCCACAACTACCGGATCTGGTCCTTCCTCGGCCTCCTCATGACCACCTAC ACCGCATGGTACCTCACCATTGCCGCCATCGCACACGGTCAGGTGGAAGGTGTGACGCAC TCGGGCCCAAGCAAGATGGTGCTCTACTTCACCGGTGCCACCAACATCCTCTACACCTTT GGAGGCCATGCTGTCACTGTGGAGATCATGCACGCGATGTGGAAACCGCACAAGTTCAAG CTCATCTACCTGGTGGCGACGCTGTACGTGCTGACGCTGACGCTGCCGTCCGCCTCCGCC GTCTACTGGGCCTTCGGCGACATGCTCCTGGACCACTCCAACGCCTTCGCCCTCCTCCCG CGCTCCGGCTTCCGCGACGCCGCAGTCATCTTCATGCTCATCCACCAGTTCATCACGTTC GGGTTCGCGTGCACGCCACTCTACTTCGTGTGGGAGAAGCTGATCGGCGTGCACGAGACG GGGAGCGTGGCCCTGCGCGCCGCCGCGCGGCTGCCCATCGTGGCGCCCATCTGGTTCCTG GCCGTCGTCTTCCCGTTTTTCGGCCCCATCAACTCCACCGTGGGCTCGCTGCTGGTCAGC TTCACCGTCTACATCATCCCGGCGCTGGCGCACATGGCCACCTTCTTGCCGCCGGCCGCC AGGGAGAACGCCGTGGAGCGGCCGCCGCGCGGGCTGGGCGGCTGGGCGGGGATGTACGCC GCCAACTTCTTCGTGGTGGCGTGGGTGCTCGTCGTCGGCTTCGGCTTCGGTGGCTGGGCC AGCACCGTCAACTTCGTCCGCCAGGTCAACACCTTTGGTCTCTTCACCAGGTGCTACCAG TGCCCACCGAGGCACTGA

Peptide Sequence

PEP ID	Zm00001d053004_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:208649304:208651866:-1 gene:Zm00001d053004 transcript:Zm00001d053004_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin import carrier2 description:Auxin transporter-like protein 3
Sequence	MASEKVETIVAGNYMEMEHEPGGGGDHDQQPSGGAASSTSSSSRGGGKKKALSSLFWHGG SVYDAWFSCASNQVAQVLLTLPYSFSQLGMASGVVFQLFYGLMGSWTAYLISILYVEYRT RKEREKVDFRNHVIQWFEVLDGLLGKHWRNVGLFFNCTFLLFGSVIQLIACASNIYYIND KYDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTIAAIAHGQVEGVTH SGPSKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPHKFKLIYLVATLYVLTLTLPSASA VYWAFGDMLLDHSNAFALLPRSGFRDAAVIFMLIHQFITFGFACTPLYFVWEKLIGVHET GSVALRAAARLPIVAPIWFLAVVFPFFGPINSTVGSLLVSFTVYIIPALAHMATFLPPAA RENAVERPPRGLGGWAGMYAANFFVVAWVLVVGFGFGGWASTVNFVRQVNTFGLFTRCYQ CPPRH

Transcript Sequence

Transcript ID	Zm00001d053004_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:208649304:208651866:-1 gene:Zm00001d053004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin import carrier2 description:Auxin transporter-like protein 3
Sequence	AGATCATTGCCGCGAGAGGGGAGAAAGGCTAGCTATCAGGAGAGATCCATCGCTCAGGAA CAGGAAGAAGTGAGGCGACAGCTCTGCAGGATGGCATCGGAGAAGGTGGAGACGATCGTG GCAGGGAACTACATGGAGATGGAGCACGAGCCCGGCGGCGGCGGAGACCATGACCAGCAA CCCAGCGGCGGCGCGGCGTCGTCCACTTCATCCAGCTCCAGGGGCGGCGGCAAGAAGAAG GCCCTGTCGAGCCTGTTCTGGCACGGCGGGTCGGTGTACGACGCGTGGTTCAGCTGCGCG TCGAACCAGGTGGCGCAGGTGCTGCTGACGCTGCCCTACTCCTTCTCGCAGCTGGGCATG GCATCCGGGGTGGTGTTCCAGCTCTTCTACGGCCTCATGGGCAGCTGGACCGCCTACCTC ATCAGCATCCTCTACGTCGAGTACCGCACCAGGAAGGAGCGCGAGAAGGTCGACTTCAGG AACCATGTCATCCAGTGGTTTGAGGTTCTGGATGGGCTACTGGGGAAGCACTGGAGGAAC GTCGGCCTCTTCTTCAACTGCACTTTCCTCCTCTTCGGCTCCGTCATCCAGCTCATCGCA TGTGCAAGCAACATCTACTACATCAACGACAAGTATGACAAGCGGACGTGGACGTACATC TTCGGCGCCTGCTGCGCCACCACCGTGTTCATCCCCTCCTTCCACAACTACCGGATCTGG TCCTTCCTCGGCCTCCTCATGACCACCTACACCGCATGGTACCTCACCATTGCCGCCATC GCACACGGTCAGGTGGAAGGTGTGACGCACTCGGGCCCAAGCAAGATGGTGCTCTACTTC ACCGGTGCCACCAACATCCTCTACACCTTTGGAGGCCATGCTGTCACTGTGGAGATCATG CACGCGATGTGGAAACCGCACAAGTTCAAGCTCATCTACCTGGTGGCGACGCTGTACGTG CTGACGCTGACGCTGCCGTCCGCCTCCGCCGTCTACTGGGCCTTCGGCGACATGCTCCTG GACCACTCCAACGCCTTCGCCCTCCTCCCGCGCTCCGGCTTCCGCGACGCCGCAGTCATC TTCATGCTCATCCACCAGTTCATCACGTTCGGGTTCGCGTGCACGCCACTCTACTTCGTG TGGGAGAAGCTGATCGGCGTGCACGAGACGGGGAGCGTGGCCCTGCGCGCCGCCGCGCGG CTGCCCATCGTGGCGCCCATCTGGTTCCTGGCCGTCGTCTTCCCGTTTTTCGGCCCCATC AACTCCACCGTGGGCTCGCTGCTGGTCAGCTTCACCGTCTACATCATCCCGGCGCTGGCG CACATGGCCACCTTCTTGCCGCCGGCCGCCAGGGAGAACGCCGTGGAGCGGCCGCCGCGC GGGCTGGGCGGCTGGGCGGGGATGTACGCCGCCAACTTCTTCGTGGTGGCGTGGGTGCTC GTCGTCGGCTTCGGCTTCGGTGGCTGGGCCAGCACCGTCAACTTCGTCCGCCAGGTCAAC ACCTTTGGTCTCTTCACCAGGTGCTACCAGTGCCCACCGAGGCACTGACTCGATGATCGA CCACCAAGATTAATATATCAACAAATTCATATGCATGCTTGAATTTCTTGAGGAAACATA TGCATATGCCTAGTCATAGAGAGAGAGAGAGACATCACAAGATCATGACGAAGAGGGTGT TCAATTTCCATGTCGACGTATGTATGACGACGATCCACATGGTGTGTCCTTGTCGGTATG TATGCGCTACGAACGGATGTGTGTATCTCTCGTTAAGATATATATTGATATTGATCGAAT TAAGCGTTACGTGTGAGAGTTACGTTGTAGCCATGCAATTCAGACTGATATTTGAATCTA TCTTT