Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052962_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:206380174:206382649:1 gene:Zm00001d052962 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein

Sequence

ATGCTTCCGGGCGTGGAGCTCGCGCGGCGGCGGCGCGTGCACTACCACGGCGACGTGGCG
TCGGCGGCGGGCACGGGGGAGCACGTCCACCACCACTACGCGCACGCGCCCGCGCCCGCG
GCGGGGCCCGCGCTCGCGGCGCGCATCCGGCTCGAGGAGAAGCTGCGCGGCGCCGCGCTG
CCGTCGACGGCGCCGTCCAGGTGGAGCAGGCTGATGCGCGACGGGAGATCGGCCCGAGGC
AACAACAGCCCTCGAAGCAGCAGGCGATACGAGCAGGACGCCGTCGCGAGCGGCACCGAG
CCCTGGCGGCCGCCGGCCCCCGCCGACCCGACGGCGGCCCTGCTGCAGGTGGCGTCGGCG
ACTGTGCCGGCGTCGGCGTCGACGCGGCGCCGGCGCGCGGAGCTGACGCGGACACTGTCC
AAGGTGGACGTGTGCGCGGTGTGCCTGGACGAGGTCCGGGAGCGGTGCCAGCGGGTGACC
CGGCTGCCGTGCTCCCACAAGTACCACTCCGAGTGCGTCCTGCCGTGGCTCGCCATCCAC
CCGGACTGCCCCTGCTGCCGCGCGCTCGTGCCGTCCCTCGACACGCTCGTCCAAGTCTAG

Peptide Sequence

PEP ID

Zm00001d052962_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:206380174:206382649:1 gene:Zm00001d052962 transcript:Zm00001d052962_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein

Sequence

MLPGVELARRRRVHYHGDVASAAGTGEHVHHHYAHAPAPAAGPALAARIRLEEKLRGAAL
PSTAPSRWSRLMRDGRSARGNNSPRSSRRYEQDAVASGTEPWRPPAPADPTAALLQVASA
TVPASASTRRRRAELTRTLSKVDVCAVCLDEVRERCQRVTRLPCSHKYHSECVLPWLAIH
PDCPCCRALVPSLDTLVQV

Transcript Sequence

Transcript ID

Zm00001d052962_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:206380174:206382649:1 gene:Zm00001d052962 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein

Sequence

ATCCGGATATCAGAAATTTCGCCGTAGTAATAACAGTATAACACACACCGCCGAGACAGA
AGAGAGAGCAGCAGGGCCCGGTCGAGGGCCGAGGCGACCAAGGACCTCCACCGTCGCGGC
GAGCAGCAGCAGAGGACGAACGATGCTTCCGGGCGTGGAGCTCGCGCGGCGGCGGCGCGT
GCACTACCACGGCGACGTGGCGTCGGCGGCGGGCACGGGGGAGCACGTCCACCACCACTA
CGCGCACGCGCCCGCGCCCGCGGCGGGGCCCGCGCTCGCGGCGCGCATCCGGCTCGAGGA
GAAGCTGCGCGGCGCCGCGCTGCCGTCGACGGCGCCGTCCAGGTGGAGCAGGCTGATGCG
CGACGGGAGATCGGCCCGAGGCAACAACAGCCCTCGAAGCAGCAGGCGATACGAGCAGGA
CGCCGTCGCGAGCGGCACCGAGCCCTGGCGGCCGCCGGCCCCCGCCGACCCGACGGCGGC
CCTGCTGCAGGTGGCGTCGGCGACTGTGCCGGCGTCGGCGTCGACGCGGCGCCGGCGCGC
GGAGCTGACGCGGACACTGTCCAAGGTGGACGTGTGCGCGGTGTGCCTGGACGAGGTCCG
GGAGCGGTGCCAGCGGGTGACCCGGCTGCCGTGCTCCCACAAGTACCACTCCGAGTGCGT
CCTGCCGTGGCTCGCCATCCACCCGGACTGCCCCTGCTGCCGCGCGCTCGTGCCGTCCCT
CGACACGCTCGTCCAAGTCTAGCGGTGCTCGTGGTGGTTGGCGATGGCGTGGCGCCTGCC
GTTGGTCTCGTCTCTTGCTCTGCTCGCGGCGGGTGACGGAAAATGTTTGGATGTTTGTTA
GGCCGCAGCTGGAACTGGAATGCATGTTTAGGACGTAGTACTAGCATAGAGGAGGACTTG
TATAGATGGCTTGGTAGCCAGTAGACTACTGGACTAGGAGACGAGCTCTGGAACTCTGGT
GCTGTGTTTGTATTCAAAACCATGTGAATTGCACGAGTTTTGGCAA